Cyprinodon tularosa (White Sands pupfish): 119778009
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Entry
119778009 CDS
T07496
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119778009 (exosc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119778009 (exosc7)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119778009 (exosc7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
119778009 (exosc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
119778009
NCBI-ProteinID:
XP_038132955
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MATVQVSEAEKVYILHGIRDDLRVDGRGCEDYRHMEVETDVVSNTDGSAKVTLGHTAVLV
GVKAEIGKPRPMIPDEGYLEFFVDCSANATPEFEGRGGEELGTELSNTLYKVFNNQHSLD
LRSLCISPGEHCWVLYVDVLLLQCDGNLYDAISVAIKAALFNTKIPKVHISSDDEGGKEI
ELSDDPYDCIRLDVENVPCMVTLCKIGHRHVVDVTLQEKACSVASLVISVTHKGVITCTR
KVGRGSLDPESICEMTEAGKRVGKALHSPLMKLLQQEESLGKKRQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagtacaagttagcgaggctgagaaagtgtacatccttcatggaataagggat
gatttacgggtggatggaagaggctgcgaggactacagacacatggaagtggaaacagat
gttgtttccaacactgacggatctgctaaagtcaccctgggccacactgctgttcttgtt
ggtgtcaaggctgagattggaaaaccaagacctatgattccagatgagggatacctagag
ttctttgtggattgctcagctaatgcaaccccagagtttgaaggcagaggaggagaagaa
ctggggacggagctgagcaacaccctctataaagtcttcaacaaccagcatagcttggat
ctgaggagcctctgtatcagtcctggagagcactgctgggtgctttatgtggacgtattg
cttcttcagtgtgacggaaatttgtacgacgctatctcagtagctataaaggctgctctc
tttaacacaaagattcctaaagtccacatatcctcagacgatgaaggagggaaagagatc
gagctctcagacgacccttacgattgcattagactcgacgtagaaaacgttccctgtatg
gtgactttgtgcaagattggccacaggcatgtggtggatgtcactctgcaggagaaagcc
tgctctgtggcgagcctcgtaatttccgtcacacacaaaggtgtcatcacctgcacaagg
aaggtggggagaggcagtctggatccagagagcatctgtgagatgacagaggcaggaaaa
cgagttgggaaagctctccactctcctctcatgaagcttctgcagcaggaggagagtctg
ggcaagaaaaggcagaaagtcggctttcttggttaa
DBGET
integrated database retrieval system
