Cyprinodon tularosa (White Sands pupfish): 119782227
Help
Entry
119782227 CDS
T07496
Name
(RefSeq) dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1-like
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04010
MAPK signaling pathway
ctul04020
Calcium signaling pathway
ctul04260
Cardiac muscle contraction
ctul04261
Adrenergic signaling in cardiomyocytes
ctul04270
Vascular smooth muscle contraction
ctul04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119782227
04020 Calcium signaling pathway
119782227
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
119782227
09153 Circulatory system
04260 Cardiac muscle contraction
119782227
04261 Adrenergic signaling in cardiomyocytes
119782227
04270 Vascular smooth muscle contraction
119782227
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctul04040
]
119782227
Ion channels [BR:
ctul04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119782227
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
119782227
NCBI-ProteinID:
XP_038139031
LinkDB
All DBs
Position
Unknown
AA seq
1845 aa
AA seq
DB search
MATNADAAKPVIMNEEELKKKQREKLKRLQATGGNPRPARSLFLFTLKNPFRKACINIVE
WKTFEIIILLTIFANCIALAVFLPMPEEDSNNTNANLESLEYIFLIIFTFECFMKIIAYG
LVFHEGAYLRNCWNILDFVIVFMGLFTFGLDTINMIAGVPMEKGGGFDMKALRAFRVLRP
LRLVSGVPSLQVVMNSILKAMLPLLHIALLVFLLVTIYAIMGLELFKCKMHKTCYYTGTN
IYAAAEGELPAPCAQAGNGRRCTINGSECRPGWEGPNNGITHFDNIGFAMLTVYQCITME
GWTKVLYWVNDAIGYEWPWLYFVPLILIGSFFVLNLVLGVLSGEFTKEREKARSRGEFQK
LRERQQLDEDLHGYMEWITHAEVLDADREGKGLLPLTSGDSDTDSLYDLEGKSRIIYYYR
LARRWNRFFRMKCLIYVKTKSFYWGVMFLVFLNTLTIATEFHHQPDSLTALQDVASRVLL
VLFVIEMFVKMYALGPRAYFMSLFNRFDFFVVLCGILEMIMLSAGAVAPLGFSVLRCIRL
LRIFKVTKYWTSLSNLVASLLNSVRSIASLLLLLFLFIVIFSLLGMQVFGGKFNFDDHRA
RRSNFDNFPQALISVFQILTGEEWTNIMYNGIMAYGGPEIPGILVSIYFIVLFVCGNYIL
LNVFLAIAVDNLAEAESLTSAQKEKAEEKMRKKLLRSKMPEKTDEERERIAKKLAEQRAK
IEGMPTTAKLKIDEFESNVNEVKDPFPPADFPGDDEEEEPEIPISPRPRPMADLQLKEEA
VPLPEASSFFIFGPQNKFRKLCYKIINASSFTNLILLFILLSSISLAAEDPIDPKSYRNQ
ILAYADIVFTTVFTIEIVLKMTVYGAFMHEGSFCRNSFNILDLIVVTVSLLSMGMESSAI
SVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTMLLNFMFACIGVQLF
KGKFYSCTDSTKVTAEECRGYYLKHVENSLQDTVLAKREWINSDFNFDNVLNGMLALFTV
STFEGWPKLLYRAIDSAEEDLGPVYNNRVDVSIFFIIYIILIAFFMMNIFVGFVIVTFQE
QGEQEYKNCELDKNQRQCVQYALKARPLRCYIPKNPYQYRVWYIVTSCYFEYLMFFLIML
NTLCLGMQHCNQSNYVTKLSDTLNLIFTVLFTVEMILKLMAFKVRGYFGDPWNVFDFIIV
IGSVVDVILSEIDAALDSSGGLYCLHGCAETDPMEEIASAENASVSITFFRLFRVMRLVK
LLNRSEGIRNLLWTFIKSFQALPHVALLIVMLFFIYAVIGMQIFGKVALVDGTQINRNNN
FQTFPQAVLMLFRCATGEAWQEVMMASMYGKKCDPKSDFLPGEENTCGSNFAVFYFLSFY
CLCAFLILNLFVAVIMDNFDYLTRDWSLLGPHHLDEFKKIWAEYDPEATGRIKHLDVVTL
LRRIQPPLGFGKFCPHRAACKRLVGMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQ
ANEELRAIIKQIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLLQDHFRKFMKRQEEYYG
YRPTKKSASGPEIQAGLRSIEEEAAPEMHRAISGDLQNEEEMDGAMGEAAEETIYQRSHG
LFGNQGESFPAEDGDAQNSQMTHQRPLQFSESESPPNSSALVASADFFPTTAPKSNTNNN
AFAEFFFEREASPEEFYNPPGDEDLDLRHSRNFTVRTNETQYPYEPDYGGNQSRNSKSAA
DQLVQEALERGGLVALSKDPDFVSVTKAEMADAMRIPVSAMEGMARGILNERSDSIPSIK
KRRPVPVPPTVPSGQKPSQPEPAVRKKRRQIPTIPARNKHGDSEV
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaacgcggatgcagccaagccagtcatcatgaatgaagaggaactgaagaag
aagcagagggagaagctgaagaggcttcaggccacagggggcaaccctcgtcctgccaga
tctctgttcctcttcaccctgaaaaaccctttccgaaaggcctgcatcaacatcgtggag
tggaaaacctttgaaataatcattctgttgaccatctttgccaactgtattgctctggct
gtgttcctgcccatgcctgaagaagacagtaataacaccaacgctaatttggaaagtctg
gaatatatcttcctgatcattttcacgtttgagtgctttatgaagatcatagcgtatggg
cttgtattccatgaaggggcctatttacggaactgttggaacatattagactttgtcatc
gttttcatgggactcttcacctttggtttggataccattaacatgatcgcaggagtgcca
atggagaagggtggggggtttgacatgaaggcactgagagcgtttagagtgttgcggccc
cttcggcttgtttcaggagtgcctagccttcaggtagtaatgaactccatcctgaaagcc
atgctgcctctgctgcacattgccctgttggtgttcttactggtcaccatctacgccatt
atgggactggagctatttaaatgcaaaatgcataagacctgttactacactggaacaaat
atctatgcagcagcagaaggcgagctacctgctccatgtgctcaggctgggaatggacgc
cgctgcacgatcaatggctcggagtgcaggcctggctgggaaggtcccaacaatggtatc
actcactttgataacattggctttgccatgctaacagtgtatcagtgcatcaccatggag
gggtggaccaaagtgctttactgggtgaatgacgccattggatatgaatggccatggctc
tattttgttcctctcattttgatcggctccttctttgtgcttaatctcgtccttggcgtg
ctcagtggagagtttaccaaagagcgagagaaggccaggtcacgaggagagtttcagaag
ttgagggaacgtcagcagctggatgaagacctccatggctacatggagtggatcactcat
gcagaagtccttgatgctgacagagaaggcaaaggtcttctgcctcttaccagtggagac
tctgacacagacagcctgtatgacttggaaggaaagagtcgtatcatctattactaccgt
ttggctcgtcgctggaaccgtttcttcaggatgaagtgtctgatttatgtgaaaaccaag
agcttttactggggtgtgatgttccttgtctttctcaacactttgaccatagccactgag
ttccaccatcagcctgactcgcttacagctctgcaagatgtggcgagtcgggtcctactg
gtgctgtttgtcattgagatgtttgtgaagatgtacgctttgggacccagagcatatttt
atgtcgctctttaaccgtttcgacttctttgtggtgctttgtggtattttggagatgatc
atgttgtcggcaggagctgtggctcccctgggcttctctgtgctcaggtgtattcggctg
ctgaggatctttaaagtgacaaagtactggacctctctgagcaacctggtggcctctctt
ctcaactctgttcgctccatcgcttctctgctgctccttctcttcctcttcattgtcatc
ttctcactcttgggaatgcaggtgtttggtgggaagttcaactttgatgaccaccgtgcc
agacgcagtaactttgacaactttcctcaggccttgattagcgtgtttcagatcctcaca
ggagaggaatggacaaacatcatgtacaatggcataatggcgtacggagggccagagatc
cctggcatcttggtttccatatattttattgtccttttcgtctgtggaaactatatcctc
ctcaatgtcttcttggccattgcggttgacaacctggcagaggctgagagtctgacttca
gctcaaaaggaaaaggcagaggagaagatgaggaagaagctgcttagatcaaaaatgcct
gagaagactgatgaagagagggagaggattgcaaagaagctggctgagcagagggcaaaa
attgagggaatgcccactacagccaagctcaaaattgatgagtttgagtcaaatgtcaat
gaagtaaaggatccatttccacctgctgatttcccaggtgatgacgaggaggaagaacct
gaaatcccaattagtcctcgaccccgaccgatggctgatctgcagctcaaggaagaagct
gttcctttgccagaagccagctcctttttcatatttggccctcaaaacaagttccgtaag
ctgtgctacaagatcatcaatgcttcgtccttcaccaacctcatcctcctcttcatcctt
ctgtcatccatctcactggcagctgaagaccccatcgatccaaaatcttatagaaaccag
attttggcctatgctgacattgtcttcacaactgtgttcactattgagatcgtgttgaag
atgactgtgtatggagcgttcatgcatgaaggttctttctgtcgtaactctttcaacatc
ctggatctgattgtggtcacggtgtctctgctgtccatgggaatggaatccagtgccatc
tctgtggtgaagattctcagggtgttgagggtattgaggcctctcagagccatcaacagg
gcaaaaggcttaaagcatgtggtccagtgtgtgtttgtggccatcaaaacaattggcaac
attgttctggtcaccatgctgctgaatttcatgtttgcctgcatcggagtgcaactcttc
aagggtaaattctacagctgcacagactcaaccaaagtgacggcggaggaatgccgggga
tactacttaaagcacgtggaaaactcactacaggacactgttctagctaaaagagagtgg
atcaacagtgactttaattttgacaacgtgctcaacgggatgctggctcttttcactgta
tcaacattcgagggatggccaaaactcctgtacagagccatagattcagcagaagaagac
ttgggtccagtctataacaaccgtgtggacgtgtccatcttcttcataatctatatcatt
ctcatcgctttcttcatgatgaatatttttgtgggttttgtcatagtcaccttccaggag
cagggtgaacaggagtataagaactgtgagctggacaagaatcagcgtcagtgtgtgcag
tacgccctgaaggctcgtcctctcaggtgctacatccccaaaaacccataccagtacaga
gtttggtacatcgtaacctcctgctactttgagtacctgatgttcttcctaattatgctg
aacacattgtgtctggggatgcagcactgcaaccagtcaaattacgttaccaagctgtca
gacaccctgaacctgatcttcactgtgctcttcacagtggagatgatccttaagctcatg
gccttcaaagtgaggggctactttggggatccttggaacgtctttgacttcatcatagtc
atcggtagcgttgtggacgtcatcctcagtgaaatcgatgccgccctggactccagtgga
ggactatactgtcttcatggctgtgctgagacagatcccatggaagaaattgcatcagct
gaaaacgcctccgtttccatcaccttcttccgactcttccgtgttatgcgtctagtcaaa
ctgctgaatcgttcagagggcatccgtaacttgctatggaccttcatcaagtctttccag
gctctccctcatgtagctctgctcatagtgatgcttttcttcatttatgctgtgatcggg
atgcagatctttggaaaggtagccttggtggacggcacccagattaaccgcaacaacaac
ttccagacattccctcaggctgtgctgatgctattccgatgtgctactggagaggcttgg
caggaggtcatgatggcttcaatgtacgggaagaagtgtgaccccaagtctgacttcctg
cctggagaggagaatacctgtgggtccaactttgctgtcttctacttcctcagcttctac
tgtctttgtgcctttctgatcctcaacctgtttgtcgctgtcatcatggacaactttgac
tatctgacccgtgattggtctctccttggtccccaccacctggatgagttcaagaaaatc
tgggcagaatatgatcctgaagccacggggagaattaagcacctggatgtggtgacgctg
ctgcgccggatccagcctccactgggctttggcaagttctgtcctcatcgtgctgcttgc
aagcgtttggttgggatgaacatgcctctcaacagtgacggtactgtcactttcaatgcc
accctgttcgcattggtcaggactgcacttaaaatcaaaacagaaggaaactttgagcag
gccaacgaggagcttagagcaatcataaagcaaatttggaaacgcactagcatgaaactg
ttggaccaggtcatccctcctattggagatgacgaggtgactgtgggaaaattctatgca
acctttctgctccaagaccatttccgaaagttcatgaagcgtcaggaggagtattatggc
taccgtcccactaagaagagcgcctcgggtcctgagattcaggcgggtttgaggagcata
gaggaagaggcagctccagagatgcacagggcaatttcaggagacttacagaatgaggaa
gaaatggatggagctatgggcgaggctgcagaagaaaccatttatcagcgatcacatggt
ctgtttggtaaccaaggagagtccttccctgccgaagatggtgacgctcagaactcgcag
atgacgcaccagcggccccttcagttctctgagtctgagtctccccccaactcctctgcc
ttggtggccagtgcagactttttccctacaactgcaccaaaaagcaacactaataacaat
gccttcgcagaatttttctttgagagagaagcaagtccagaggagttctataatccccct
ggggatgaggatctagacctaaggcactccaggaactttacagtaagaacaaatgaaaca
cagtatccttatgagcctgactatggcggcaatcagagcaggaactcaaagtctgcagct
gatcagctcgtccaagaggctcttgaaaggggaggtcttgtcgccttgtccaaagaccct
gattttgtctctgtgactaaggcggagatggctgatgccatgcggatccccgtttcagcg
atggaaggcatggctaggggcatcctcaacgaacgctctgacagcatcccctctatcaaa
aagcgtcgtcccgttcctgtacctcccactgtccccagtggacaaaagcccagtcagcct
gagccagcagttagaaagaagagacgtcaaattcccactattcctgccagaaacaaacat
ggagactctgaagtgtag
DBGET
integrated database retrieval system
