Cyprinodon tularosa (White Sands pupfish): 119785525
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Entry
119785525 CDS
T07496
Symbol
capn1b
Name
(RefSeq) calpain-1 catalytic subunit b
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04141
Protein processing in endoplasmic reticulum
ctul04210
Apoptosis
ctul04217
Necroptosis
ctul04218
Cellular senescence
ctul04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119785525 (capn1b)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
119785525 (capn1b)
04217 Necroptosis
119785525 (capn1b)
04218 Cellular senescence
119785525 (capn1b)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119785525 (capn1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ctul01002
]
119785525 (capn1b)
Enzymes [BR:
ctul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
119785525 (capn1b)
Peptidases and inhibitors [BR:
ctul01002
]
Cysteine peptidases
Family C2: calpain family
119785525 (capn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
119785525
NCBI-ProteinID:
XP_038144170
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MFGGVSGRIQHERDRAGGLGSAQQAVKFMNQDFQALKEECLQNRTLFQDPMFPAEPASLG
FKELGPLSAKTRGVEWKRPTELSANPQFIVGGATRTDISQGALGDCWLLAAIGSLTLNQR
LLHQVVPHGQNFNHQYAGIFHFQFWQFGEWVDVVIDDRLPVKDGELLFVHSAEGSEFWSA
LLEKAYAKLCGSYEALSGGSTTEGFEDFTGGVAEMYELKKAPRDLYRIISKALERGSLLG
CSIDITSSCDMEAITFKKLVKGHAYSVTGLRQVEFRGRQERLIRIRNPWGQVEWTGAWSD
SSSEWNYVDSAEKDEMLCKMEDGEFWMPFQEFLRQFSRLEICNLTPDALSQDATSFWTTM
THEGSWRRGSTAGGCRNHPNTFWINPQYKMTLLEEDDDPEDDEAACSVLVALMQKDRRRY
RQHGQDMHTIGFAIYEIPKEFQGSAGVHMKKDFFLRRSSCARSETFINLREVSSRFRLPP
GEYLIVPSTFEPSKEGDFVLRVFTEKESETEDMDDVVVTNLDEEEEVTERDIDDSFRSMF
AQLSGDDMEISVRELRTILNRVVSKHRDLQTDGFSMESCRAMVSLMDKDGSARLGLVEFQ
ILWNKIKKWLGIFREFDLDKSGCMNSYEMRLAFENGGFKLNNKLYQMLIARYADNEIIDF
DNFTCCVVKLETMFKTFQGLDRDGTGTVELNFSEWLFLTMCG
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcggagtgtcaggacgaatccaacatgagcgggaccgagccggaggcttgggc
tcggcccagcaggcggtaaagttcatgaaccaggacttccaggccttaaaggaggagtgc
cttcagaacagaaccctgtttcaggaccccatgttcccggcagaacctgcctcgctgggc
tttaaggaacttggacctctcagcgccaaaaccagaggagtggaatggaaaagacccacg
gagctgtcagctaaccctcagttcattgtgggcggggccaccaggactgacatctctcag
ggggcgctgggggactgctggctgttggctgctatcggctctctgactctaaaccaacgg
ctgcttcatcaggtggttcctcatggccagaactttaaccatcagtatgctggcatcttc
cacttccagttctggcagtttggggagtgggtggacgtggtgattgatgaccggctgcca
gttaaagatggagagctgctgtttgtccactcagcagaaggaagcgagttctggagcgct
ctgctggagaaagcttacgctaagttgtgcggctcgtatgaagcattgtccggtggcagc
accactgaaggttttgaggacttcacagggggtgtggcagagatgtatgagctgaagaaa
gctcccagagatctctaccggattatcagcaaagctctagagagaggatcattgctggga
tgctctatagatatcaccagctcctgtgacatggaggccatcaccttcaagaagctagtg
aaaggccacgcctactcagtgactggcctaagacaggtggagttcagagggcgacaggag
cgtctgatccgaatcaggaacccctggggtcaggtggagtggaccggagcctggagtgac
agctcctcagaatggaactacgtcgattctgcggaaaaggatgagatgctttgtaagatg
gaggacggggagttctggatgcctttccaggaatttctgcgtcagttctcccgtctagag
atctgtaacctgaccccagatgccctgagtcaggacgccaccagcttctggaccacgatg
acgcatgagggcagctggaggagaggaagcacggccggaggttgcaggaaccacccgaac
acattctggatcaaccctcagtataagatgactctgttagaggaggatgatgaccctgag
gatgacgaggctgcctgcagcgtcctggtggcactgatgcagaaggaccgccgccggtac
cgccaacatggccaggacatgcacaccatcggtttcgccatttatgagattcccaaagag
ttccaaggttctgcaggtgtccacatgaagaaggatttcttcctgcgccgctcttcctgc
gctcgctccgagaccttcatcaaccttcgagaggtgagctccaggttccgccttcctcca
ggagagtacctgatcgtcccatctacgtttgagccctccaaggagggggactttgtcctg
agagttttcactgaaaaggagtccgagacagaggacatggatgatgtcgtcgttacaaac
ctggatgaggaggaggaagtcaccgaaagagacattgatgactcctttaggtccatgttt
gctcagctttctggagacgacatggagatctcagtgcgtgagctcagaaccatcctcaac
agagtggtctccaaacacagagatctacagaccgatggattcagcatggagtcctgcagg
gccatggtcagcctcatggataaagatggcagtgctcggctcggactggtggagtttcag
atcctttggaacaagattaagaagtggttgggaatcttcagagagtttgatctggataag
tccggctgcatgaattcctacgagatgcgtctggcgtttgaaaatggcgggttcaaactg
aacaacaagctctatcagatgctgatcgctagatacgccgacaacgagatcatcgacttt
gacaacttcacctgctgcgtggtcaaactggagaccatgttcaagaccttccaaggcctg
gacagagatgggaccggaactgtggagttaaatttcagtgagtggctctttttgaccatg
tgtggctaa
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