Cyprinodon tularosa (White Sands pupfish): 119786433
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Entry
119786433 CDS
T07496
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctul04040
]
119786433
Ion channels [BR:
ctul04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
119786433
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
Motif
Other DBs
NCBI-GeneID:
119786433
NCBI-ProteinID:
XP_038145703
LinkDB
All DBs
Position
Unknown
AA seq
1524 aa
AA seq
DB search
MCEKAGDNPDYGYTSFDNFGWAFLSLFRLMTQDCWERLYQQTLRAAGKPYMIFFVLVIFL
GSFYLINLILAVVAMAYEEQCQLNIKKAQEKEDEYNAAIEQLKCQQEDAQALAIAAAKVN
GEALSKGGGTESSSEASKLNSKSIKERRNRRKKRKEEEEKGARKISHSDSFESLTPTHFH
FSADAYPLNYDMKCSSTHQPEMTDTDYKLGSIENYSECLDLPDSHQMRQRALSIASVITT
TIEELEESRQKCPPCWYKFAHKFLIWDSCPLWLKIKEKVKIIVMDPFMDLAITICIVLNT
LFMAMEYYKMTAWFKDMLRVGNQVFTAVFTVEMVLKIIALDPYYYFQVRWNIFDAVIVCL
SLAEVLLQSVKGMSILRSFRLLRVFKLAKSWPTLNKLIKIIGNSVGALGNLTLVLAIIVF
IFAVVGMQLFGKYYKDCVCKISDDCTLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMRV
AGQYQCLTLYMMVMVIGNLVVLNLFLALLLSSFSADNLMKSGDDDQEVNNLQIAFDRIHR
ATAYIKFKCSRCYNSLYVREIKKSEEKPFGHNGIPNHTIKDIPKNGNGEVTGVDKSGDKY
IVNSKSDDSILSFIHNPSLTVTVPIAAEESDFEMLNTEDFSSISSNVPEVHVAVSGFDDE
QLSASEGSTVDDLSEGEPAELEFPVFNEIKDPHDCFTAGCVQKFKCCQVNVNKGFWKVWW
TLRKTCYQIVEHNWFESFIIFMILLSSGALAFEDVYSEQRKTIKVVLEFADKMFTFIFIL
EMLLKWMAYGFAKYFTNAWCWLDFLIVDISLVSLVANALERSDLGAIKSLRTLRALRPLR
ALSRFEGMRVVVNALLGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYKCVHNDTGEEF
SKDIVKYKNDCDIHPNGKWKNLKVNFDNVAMGYLALLEVATFKGWMDIMYAAVDSPKEPE
EQPEYEINLKMYGYFVCFIIFGAFFTLNLFIGVIIDNFNQQKRKLGGQDIFMTDEQKKYY
NAMKKLGSKKPQKPIPRPENKFQGYIFDFVTQQAFDIIIMVLIWLNMVTMMVETEDQSDK
WEETLKIINIVFIVIFSGECLLKMIALRHYFFINGWNVFDFVVVILSIVGICLAGVIEKY
FVSPTLFRVIRLARIGRVLRLIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFG
MSNFAHVKREKGIDDLFNFETFGNSMICLFQITTSAGWDALLDPILNTEKNGDCDPLFEH
PGSNNVRGNCGNPAVGIAFFVSYIIICFLIVVNMYIAVILENFGVATEESTEPLSEDDFE
IFYEVWEKFDPLATQFVKYNMLSDFADALTPPLRIPKPNKFELVSMDLPVVSGDRIHCLD
ILFAFTKRVLGDSEDMDSLRAQMEERFMAANPSKVSYEPITTTFRHKQENVSAAVIQRAF
RHYTRKKIFDAVIANDEKGEQLSDKEDHVTEKPKEVSIADRAERPPLKDSQSSSNSVTPN
GDNKHKKDESEKEVESKDISEQNK
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaaaaagctggagacaacccagactatggttatacaagctttgacaactttggt
tgggccttcctttctctgttcagactaatgacacaggattgctgggaacgcctttatcag
cagacactgcgagcagctgggaagccctacatgatcttttttgtcttggttatattcctt
ggttccttctatttgataaacttgattttggctgtagtggctatggcctatgaggagcag
tgccagctcaacataaaaaaagctcaggagaaggaggatgaatataatgcagctatcgag
cagctaaaatgtcagcaagaggatgctcaggcattggcaatagcagctgcaaaagtcaac
ggagaggccttgagtaaagggggtggaactgaaagttcctcagaggcttctaagctgaac
tccaaaagcatcaaagaacggcgcaaccggcgaaaaaagagaaaagaggaggaagaaaaa
ggagccaggaagatatctcattcagattcctttgaaagtttaacaccaactcatttccac
ttctctgcagatgcttacccactcaactatgacatgaaatgttcatctacacaccagcct
gagatgacagacacagactacaaactgggcagcattgaaaactacagcgagtgtttggac
ctacctgacagccatcagatgagacagagagcattaagtatagccagcgtcatcacaacc
accattgaagaactggaagaatcaaggcagaaatgtcctccttgctggtacaaatttgcc
cacaaatttctcatctgggacagttgcccactttggttgaagatcaaagaaaaagtcaaa
attattgtgatggacccattcatggacctagctatcaccatctgcattgtattaaacaca
ttattcatggccatggagtattataaaatgactgcttggttcaaagatatgctgcgtgtg
ggcaaccaggtgttcacagccgtctttacagtagaaatggtactcaagataattgcattg
gacccatactactactttcaagtgcgatggaatatttttgatgcagtcattgtctgctta
agcttggcagaagttcttctgcaatcagtgaaaggcatgtccattctaagatcgttcaga
ctgctgagagtgttcaagttggctaagtcctggcccactctcaataaactcatcaaaata
attggtaattccgtcggagctctgggcaacctgaccctggtgctggcaatcattgttttc
atctttgctgttgtgggcatgcagctgtttggaaaatactataaggattgtgtttgtaaa
atctctgacgactgcactctgcctcgttggcacatgaatgacttcttccattcattcctc
attgtgttccgagtgctttgtggagaatggattgaaaccatgtgggactgtatgagagtc
gcagggcaataccagtgtctcactctctacatgatggtcatggttattggaaatcttgtg
gtgctgaacttgttccttgccctcttgctgagctcattcagtgcagataatctgatgaag
tctggggatgatgatcaggaggtcaacaatttgcagattgcatttgatcggatacacaga
gctacagcttacatcaagttcaagtgttcaagatgttacaatagtttgtacgtcagagaa
ataaaaaaaagtgaggaaaaaccatttgggcacaacggtatcccaaatcatactattaaa
gacatccctaaaaatggcaatggggaagttactggagtggacaaaagtggggacaagtac
atagtcaacagtaagagcgatgattccatcctttctttcatacataacccaagtctgact
gtgaccgttcctattgctgctgaagaatcagactttgaaatgctaaacacagaagacttc
agtagcatttcatccaatgtgcctgaagttcacgtggctgtcagtggttttgatgatgag
cagctaagtgcctctgaggggagtacagtggatgacctgtcagaaggagagccagctgag
cttgaattccctgtattcaacgagataaaggacccacatgactgctttaccgcaggctgt
gtgcagaaattcaaatgttgccaagtaaatgtgaataaaggcttttggaaggtgtggtgg
acactaaggaagacctgttaccagatagttgagcacaactggtttgaaagcttcatcatc
ttcatgattttgctgagcagtggagcacttgcttttgaagatgtgtattctgagcagagg
aagacaatcaaagtagtattggagtttgctgacaaaatgtttaccttcatcttcattctg
gaaatgctcctgaaatggatggcatatggatttgcaaagtatttcacaaatgcatggtgc
tggctggacttcctcattgttgatatctcactggtcagtttggtggctaatgccttagaa
cgctcagatttaggagcaatcaaatctctgaggaccctgcgagctctaaggccactaaga
gccctgtcgaggtttgagggcatgagggtagttgtcaatgccctcctgggagccattcct
tccatatttaatgtgctgttggtatgcctcatcttctggcttattttcagcataatggga
gtcaacctatttgcaggaaagttctacaaatgtgtacataacgacactggtgaagaattc
tccaaagacatagtgaaatacaaaaatgactgtgatattcatccaaatggaaaatggaag
aacctcaaagtcaactttgacaatgtggcaatgggctatcttgctcttctggaagttgca
acattcaaaggctggatggatattatgtatgctgctgtggattctccaaaagaaccagag
gaacagccagaatatgaaatcaacttgaagatgtatggatattttgtttgcttcatcata
tttggggctttttttacccttaatctcttcattggtgtcattatagacaatttcaatcaa
cagaagagaaagttaggaggtcaagacattttcatgacggatgaacaaaagaaatactat
aatgctatgaagaagctgggatcaaagaagccccagaagccaattccaaggccagagaac
aagtttcaaggatacatttttgattttgtcacacaacaagcatttgatattataataatg
gttctgatatggctaaatatggtaaccatgatggtggaaacagaggaccagtctgacaaa
tgggaagaaaccctcaagatcatcaacatagtgttcattgtcatcttctctggagagtgt
cttttaaagatgattgcacttcgccattactttttcatcaatggttggaatgtttttgat
tttgttgtggtcatcctgtcaattgttggcatttgtcttgcaggtgtgatagagaagtat
tttgtctctccaacgctgttcagagtgattcgactggctagaataggccgcgtcctccgc
cttataaaaagtgccaagggaatccgcacactcttgtttgccttgatgatgtcacttcct
gcgttgttcaatattggtctcttgctcttcttagtgatgtttatctatgccatttttgga
atgtcaaactttgcccatgtcaagagggagaaaggcattgatgacctttttaattttgaa
acctttggaaacagcatgatctgtttgtttcaaatcaccacatcggcagggtgggacgcc
ctcctggatccaatactcaatacggaaaaaaacggggattgtgatcctctatttgagcat
cctggtagtaataacgtgagaggaaactgtggaaatcctgctgtgggaattgccttcttt
gtgagttatataattatctgcttccttattgttgtaaacatgtacattgcagtcatccta
gagaattttggggtggccactgaggagagcactgaacctttaagtgaggacgactttgaa
atattttatgaggtctgggaaaagtttgaccctcttgctacacagtttgttaaatacaac
atgctgtcagactttgccgatgctttaacccccccactacgcattcccaagcctaacaaa
tttgagcttgtctctatggatctaccagttgtgagtggtgaccgcattcactgccttgat
atcttatttgcctttacaaaacgtgttttgggtgatagcgaggatatggacagtctcaga
gcacaaatggaagaacgcttcatggctgcgaatccatccaaggtttcgtacgaacccatc
acaaccacctttcgccacaaacaggaaaacgtgtcggctgctgtgattcagagagctttc
agacattatactaggaaaaagatttttgatgcagtcattgctaatgatgagaagggtgaa
cagctgtctgacaaagaagatcatgttacagaaaaacctaaagaagtatcgattgccgat
agggcggaacggccacctttgaaggactctcaatcttcaagtaacagtgtgacaccaaat
ggggacaacaaacataaaaaggatgaaagtgaaaaggaagttgagagcaaggacatcagt
gaacaaaataaataa
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