Cyprinodon tularosa (White Sands pupfish): 119787455
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Entry
119787455 CDS
T07496
Symbol
capn1
Name
(RefSeq) calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04141
Protein processing in endoplasmic reticulum
ctul04210
Apoptosis
ctul04217
Necroptosis
ctul04218
Cellular senescence
ctul04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119787455 (capn1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
119787455 (capn1)
04217 Necroptosis
119787455 (capn1)
04218 Cellular senescence
119787455 (capn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119787455 (capn1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ctul01002
]
119787455 (capn1)
Enzymes [BR:
ctul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
119787455 (capn1)
Peptidases and inhibitors [BR:
ctul01002
]
Cysteine peptidases
Family C2: calpain family
119787455 (capn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
EF-hand_5
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
119787455
NCBI-ProteinID:
XP_038147256
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MVEAPIYATGMAAKLRSQWDREQGLGQNDNAVKFLGQNYESLKAQCLRSGKLFEDSMFPC
TTSSLGYDELGPRSSKTSGVRWMRPTELCRRPEFIVDGATRTDICQGALGDCWLLAAIAS
LTLNDNLLHRVVPHGQSFQQGYAGIFHFQFWQFGEWVEVVIDDRLPVKDGKLLFVHSAEG
TEFWSALLEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEMFELRKAPSDLYSIISRAIE
RGSLLGCSIDITSALDMEAVTFKKLVKGHAYSVTAVEEVVYRGNLTKLVRIRNPWGEVEW
TGPWSDDSREWDSVDRSVRAKLQNRSEDGEFWMSFSDFLREFTRLEICNLTADALQHSQM
KKWNTSLFGGEWRRGSTAGGCRNYPATFWLNPQFKIMLQHPDTPGKPDCSFLVALMQKDR
RKKRREGKDMETIGFALYEVPDEYAGSSGVHLKRDFFLTHASSARSEQFINLREVSSRLQ
LPVGEYIIVPSTFEPNKEGDFVLRVFSEKPAGSEELDDKVVANLPEEPTVDESRIDAGFK
NLFRQLAGPDMEISLNELQTILNRIISKHQDLKTDGFSKEACRSMINLMDVDGSGKLGLT
EFHVLWEKIRRYLTIYRQFDLDKSGTMNSYEMRMALESAGFKLNNHLFQLIILRYTEEDM
NIDFDNFVTCLVRLETMFKTFKNMDTDGDGEISLNFFQWITLTMFA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggtggaggccccaatttatgccacaggcatggccgccaagctcaggagtcagtgggat
cgagagcaaggcctcggacagaacgacaacgccgtgaagtttctgggtcagaactacgag
tctcttaaagcgcagtgcctacggagcgggaagctgtttgaggacagcatgttcccctgc
accacatcgtctctgggatacgacgagctcggacccaggtcctccaagaccagcggagta
cgctggatgaggcccacggagttatgcaggcggccggagttcattgtagacggagcaact
cgcacagacatctgtcagggagctctgggagactgctggctgctggcagccatcgcctca
ctgaccctcaatgataacctcctccatagagtggtccctcatggacagagcttccagcag
ggatatgccggcatcttccacttccagttctggcagtttggagaatgggtggaggtggtg
atcgacgaccgtctaccagtgaaagacgggaagttgctgtttgtccattctgcagagggg
acagagttctggagcgctctcttggaaaaggcctacgccaaattaaatggctgttatgag
gcgctgtcaggtgggagcacgtcggagggcttcgaagacttcaccggtggagtgacggag
atgtttgagctgagaaaagccccttcggacctctacagcatcatcagccgagccattgag
agaggatccctgcttggctgctcaattgatatcaccagtgcattagacatggaggccgtc
acatttaagaagctggtgaaaggccacgcctactctgtgactgctgtggaagaggtggtg
tacagaggaaatctgaccaagctggttcgcatcagaaacccctggggggaggtggaatgg
accgggccctggagtgatgactccagagagtgggactccgtggatcgctcagtcagggct
aaacttcagaaccgcagtgaagatggggaattctggatgtccttcagtgacttcctacga
gagttcacccgtctggagatctgcaacctgacggcggatgccctgcagcacagccagatg
aagaaatggaacacgtcgctcttcgggggagagtggaggagaggcagcacggccggaggc
tgcaggaactacccagcaacattttggttgaatcctcagtttaagatcatgctacagcac
ccagacacccccggcaagccagactgtagctttctggtcgccctcatgcaaaaagaccgc
aggaagaaaagacgagaaggcaaagatatggagaccatcgggtttgctctgtatgaggtt
ccagatgagtatgcggggagctcgggggtccacctgaagcgggacttcttcctcactcac
gcctccagcgctcgatcggagcagtttatcaacctgagggaggtcagctcgcgcttgcag
ttgccggtcggggagtacatcatcgtcccctctacctttgagcccaataaagaaggagac
tttgtgctgagggtgttctctgaaaaacctgctggttctgaggagcttgatgataaagtc
gttgcaaaccttcctgaagagcctacagttgatgagagccggattgacgccggcttcaag
aatctcttccggcagctggcaggacctgacatggagatcagcctcaatgaacttcagacc
atcctgaacaggatcatttccaaacatcaggacctgaagacagatggcttttctaaagaa
gcttgtcgcagtatgataaacctcatggacgtggacggaagtgggaagcttgggttgacg
gagttccatgttctctgggaaaaaatccgacgatacctgactatatacagacagtttgat
ttggacaaatcgggtaccatgaactcctatgagatgcgaatggcccttgaatctgcaggt
ttcaagctgaataaccacctgttccagctgatcatcctgcgctacaccgaggaagacatg
aatatcgactttgacaattttgtcacatgtttggtccgcctggagaccatgttcaaaacg
tttaaaaacatggacacggatggggacggggaaatatccctcaacttctttcagtggatt
accctgaccatgtttgcctag
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integrated database retrieval system
