Cyprinodon tularosa (White Sands pupfish): 119788868
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Entry
119788868 CDS
T07496
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03030
DNA replication
ctul03410
Base excision repair
ctul03420
Nucleotide excision repair
ctul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119788868 (rfc5)
03410 Base excision repair
119788868 (rfc5)
03420 Nucleotide excision repair
119788868 (rfc5)
03430 Mismatch repair
119788868 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctul03032
]
119788868 (rfc5)
03036 Chromosome and associated proteins [BR:
ctul03036
]
119788868 (rfc5)
03400 DNA repair and recombination proteins [BR:
ctul03400
]
119788868 (rfc5)
DNA replication proteins [BR:
ctul03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119788868 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
119788868 (rfc5)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
119788868 (rfc5)
DNA repair and recombination proteins [BR:
ctul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119788868 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
119788868 (rfc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_11
AAA_22
RuvB_N
AAA_24
AAA_assoc_2
ResIII
AAA_14
DEAD
AAA_16
DUF815
PhoH
AAA_7
ATPase_2
DNA_pol3_delta
AAA_19
TIP49
AAA_5
AAA_30
AAA_2
Gp44_lid
nSTAND3
Thioredoxin_6
T2SSE
AAA_25
Mg_chelatase
bpMoxR
DUF4119
Glyco_hydro_57
Motif
Other DBs
NCBI-GeneID:
119788868
NCBI-ProteinID:
XP_038149491
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MASTNKGQLQSRNLPWVEKYRPQSLDDLISHKDILSTIQKFISEEKLPHLLFYGPPGTGK
TSTILACARQLYKDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPDQMIPRL
EHVIQQENIDVSSDGIKAIVTLSSGDMRRSLNILQSTSMAYEKVTEHTVYTCTGHPLRSD
MANILDWCLNKDFTSAYKQILELKTLKGLALHDILSEVHLLIHRVDFPPAIRIGLLIKLA
DIEYRLASGTDEKIQLSSMVAAFQAVRDMVVSEAS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaacaaataagggccagttacagagcaggaatctaccatgggttgaaaaatac
agacctcaatcgcttgatgatttgatttcacacaaagatattctgagcaccatccagaaa
ttcatcagtgaggaaaagcttccccacctgttgttctacggcccccctggaacgggaaag
acgtccacgatcctggcctgtgcaaggcagctctacaaggacaaagagtttaactccatg
gtgttggagctcaacgcatcagatgacagggggattgacgtcgtccgaggtcctattttg
agttttgccagcaccaggactattttcaaaaagggattcaagttggtgatactggatgag
gccgatgctatgacccaggatgcccagaatgcattgcgacgagtcattgagaagttcaca
gaaaacactcgattctgcctcatctgcaactacttgtccaagatcatcccagccctgcag
tctcgctgcaccaggttccgcttcggccctctgtctccggaccagatgatccctcgactg
gagcacgttatccagcaggagaacattgatgtcagttcagacggaataaaggccattgtc
actttatcgtcaggtgatatgagaagatcactcaacatcctgcagagcaccagtatggcg
tatgagaaggtcacagaacacacagtgtatacctgcacaggccacccactccgctcagac
atggccaacatcctggactggtgcctcaacaaggactttacttcagcttataaacaaatt
ctggagctgaagactttgaagggtttggctctgcatgatattctctctgaggtgcatctg
ctcatccacagagtggactttcctccagctattcggattggcctgctgatcaagttagct
gatatagaatatcggctggcctcaggaacggatgaaaagatccagctgagctctatggtt
gcagctttccaggcagtcagagacatggtggtcagtgaagcctcttaa
DBGET
integrated database retrieval system
