Cyprinodon tularosa (White Sands pupfish): 119791598
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Entry
119791598 CDS
T07496
Symbol
atg16l1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04136
Autophagy - other
ctul04140
Autophagy - animal
ctul04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119791598 (atg16l1)
04136 Autophagy - other
119791598 (atg16l1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119791598 (atg16l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctul04131
]
119791598 (atg16l1)
03029 Mitochondrial biogenesis [BR:
ctul03029
]
119791598 (atg16l1)
Membrane trafficking [BR:
ctul04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
119791598 (atg16l1)
Others
Specific organelles associated proteins
Auto phagosome
119791598 (atg16l1)
Mitochondrial biogenesis [BR:
ctul03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
119791598 (atg16l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
ATG16
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR3_2nd
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_RIG_2nd
eIF2A
Beta-prop_EIPR1
Beta-prop_ACSF4
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Tricorn_2nd
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF12
DUF4200
HEF_HK
WHD_CYT4
HALZ
DUF7310
Phage_GPO
Motif
Other DBs
NCBI-GeneID:
119791598
NCBI-ProteinID:
XP_038153716
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MAERRAECTWKRHILEQLKLRDRVQRHTFEEIVHQYNRLLEKSDLQTVLTERYQTDKYDV
QRGHEASSVDSSRSDTLQQEMAQMRIRHQEELTELHKKRGELAQTVIELNNLIQQKDREI
QNNEARMLECQQQITSLEGDCQELRNSLQELEQANQTLKDEYDALQITFSALEEKLRKTT
EDNQELVSRWMAEKALEANKLNAENEKDTRRRQAKLQKDLADAAKEPLPIEQDDDIDVLP
EEGGKGGDTSPNRPISRTPSRKTLQQPPGGLLDSISNMFGRRRSTNSFSTSPESTETPSG
VCAEVRVPSTALHVFEAHDGEVNTVRFSPGSRLLATGGMDRRVKLWEVVSGRCEAKGALT
GSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSARFLLDNARI
VSGSYDRTLKLWDLRSKVCMKTVFAGSSCNDIVCTEQCVMSGHFDKKVRFWDIRAESIVR
EMELMGRVTSLDLNHDRSELLTCSRDDLLKIIDLRSNAVRQTFSAQGFKCGADWTRVTFS
PDGSYVAGGSADGALYIWNVLTGKLDRTLDRNHSTAVNCVSWSPSGTYVASVEKGSRAIL
WSDM
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggagggccgaatgcacctggaagagacacatcttggagcaactgaagctt
agagacagagttcagagacacactttcgaggagatcgtccaccagtacaatcgccttttg
gaaaaatccgacctgcagactgtcctcacagaaagataccagacggacaaatatgacgtc
cagagaggtcatgaggccagctccgtggactcatcccgcagcgacaccctgcagcaggag
atggctcagatgaggatccgccatcaggaggagctgacagagctgcacaagaaacgaggg
gagctcgctcagactgtgatagagctcaacaacctgatccagcagaaggaccgagagatc
cagaacaacgaggccaggatgttggagtgtcagcagcagatcaccagcttggagggagac
tgccaggagctgaggaacagcctgcaggaactggagcaggccaatcagacactgaaggac
gagtacgatgccctgcagatcaccttctccgccctggaggagaaactgaggaagaccaca
gaggacaaccaggagctggtgtcccgctggatggcggagaaagcgctggaggccaacaag
ctcaatgctgagaacgagaaggacaccaggcgcagacaggccaaattgcagaaggatctg
gcagacgctgccaaggagccgctgcccatcgaacaggacgacgacattgatgtgctgcct
gaggaaggaggaaagggaggggacacgtccccaaacagaccaatcagcagaacgcccagc
aggaagacgctccagcagcctcctggcgggctgctcgactccatctctaacatgtttggc
aggcgtaggtcgactaactctttcagcacgtctccagaaagtacagagacgccgtcgggg
gtgtgtgcagaggtccgggtgccgtccacagccctgcatgtctttgaagcccacgacgga
gaggtgaacaccgtcaggttcagccctggctctcgtctcctagcaacaggagggatggac
cgcagggtgaagctatgggaggtcgtctcaggtcgctgtgaggctaaaggagctctgacc
ggcagcaacgcaggaatcaccagcatcgagttcgacagtgctggctcctacctgctcgct
gcatccaatgactttgccagtcgaatctggaccgtggacgactacagactgaggcacacc
ttaacgggtcacagcgggaaggtgttgtcagcccgcttccttttggacaacgctcgcatc
gtgtctgggagctatgaccgcacgctcaaactgtgggaccttcgcagcaaagtctgcatg
aagacggtcttcgccggctccagctgtaatgacatcgtgtgcacggagcagtgtgtcatg
agtggccactttgacaagaaagtccgattttgggacatcagggcggagagcatcgtgcga
gagatggagctgatgggtcgggtcacgtctctggacctgaaccacgaccgcagcgagctg
ctgacctgttctagagacgacctgctgaagatcatcgacctgcgcagcaacgccgtacgg
cagacgttcagtgctcagggcttcaagtgtggagccgattggaccagagtcaccttcagc
cctgacggcagctatgtggccggagggtcagccgatggcgccctgtacatctggaacgtc
ctgacggggaaactagaccggactctggacagaaaccacagcaccgccgtcaactgcgtg
tcatggtcgccatcggggacgtacgtggccagcgtggagaagggcagcagagccatcctg
tggtcagacatgtga
DBGET
integrated database retrieval system
