Cyprinodon tularosa (White Sands pupfish): 119793365
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Entry
119793365 CDS
T07496
Symbol
cop1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04115
p53 signaling pathway
ctul04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119793365 (cop1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
119793365 (cop1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctul04121
]
119793365 (cop1)
Enzymes [BR:
ctul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119793365 (cop1)
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119793365 (cop1)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
119793365 (cop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
WD40_like
zf-rbx1
zf-RING_10
UvrD-helicase
zf_C2H2_10
Sina_RING
Motif
Other DBs
NCBI-GeneID:
119793365
NCBI-ProteinID:
XP_038156443
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MSGSRPQQSGGGVSSVPGTSSSSSNNNSSSSDAVTSNGPAAGNLVPSRTLAATSGGGSFA
SLTTSRPSASGSRKKSLHQAPLYNGLLNSYEDKSNDFVCPICFEMIEEAHMTKCGHSFCF
KCIRQSLEDSNRCPKCNYIVDNVDQLYPNFLVNELILKQKQRSEEKRLKLDHPNWPRWQV
FQDILSPDQENLDLANVNLMLELLVQKKKQLEAESQAAQRQILMEFLKEARRNKREQLDQ
LQKELNFLEEDIKRVEEISGLYSPMMEAECTVPNVEAPSPAPSSIIEPPDYNQPPGFGAT
TQVKRQTWYNSTLASRRKRLTAHFEDLEQCYFSNKMSRITDEGRNLNQLDDFMECLSKFT
RYNTVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVFEYGTVIQDAVDI
HYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVD
FNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPTSRYHLAFGCADHCV
HYYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTDSQLKLWNVNKPHCLRSFKGHI
NEKNFVGLASNGDYVACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDKKEDDTNEFV
SAVCWRALSDGESNVLIAANSQGTIKVLELV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcagccgaccacaacagagcggtggtggagtaagttcagtgcctggtaccagc
agcagtagtagcaacaacaacagcagcagcagcgatgccgttacgagtaacgggcccgct
gctgggaatcttgtaccctctcggacactggctgcaacaagcgggggaggtagcttcgca
tccttaacaacaagtagaccatccgcttcaggcagcagaaagaagtccctccaccaggca
cccctgtacaacggcctcttgaactcatacgaggataaaagcaacgactttgtgtgtccc
atttgcttcgaaatgatagaagaggcacatatgacaaagtgtggacacagtttttgtttc
aaatgtatccgccagagcttggaggacagcaacagatgtcctaagtgtaactatattgtt
gacaacgtggatcagctgtaccctaactttcttgtaaatgaactgattcttaagcagaaa
caaaggtctgaggaaaaaagactaaaattagatcatcctaactggccacgttggcaggtc
ttccaggacattttaagccctgatcaagaaaacttggaccttgcaaacgtcaatctgatg
ttggagcttttggttcaaaagaagaagcagctagaggcggaatcccaagcagcacagaga
cagatcctcatggagttccttaaagaagcaaggagaaacaagagagagcaactcgatcag
ctacagaaagagctgaatttccttgaagaagacataaaacgggttgaggagataagtgga
ctttactccccaatgatggaggcagagtgcacagttcccaatgttgaggctccttctcct
gcacccagcagtatcattgaacctccagattataaccaacctccagggtttggtgcaaca
acccaggtgaagcggcagacctggtataacagtaccctggcttcaagaagaaaaaggcta
acggctcattttgaggatctggagcagtgctacttctccaacaagatgtcacgcatcaca
gatgagggcaggaacctgaaccagctggatgatttcatggagtgtttatctaaattcacc
cgttacaacactgtgcggccgctggccactctctcctatgccagtgacctctataacggc
tccagtatcgtctctagtattgagtttgaccgtgactgtgattattttgccatcgctggt
gtgaccaagaagatcaaggtttttgagtatggaactgtgatccaagatgcagtggacatt
cactaccccgtcaatgaaatgacctgcaattccaaaatcagctgtatcagctggagcagt
tatcacaaaaaccttctggccagcagcgactatgagggaaccgtcattttgtgggacgga
ttcaccggccagcgatccaaagtctaccaggaacatgaaaaaaggtgttggagtgtggac
tttaatctgatggacccaaagctcttagcctctggttctgatgatgctaaagtaaagttg
tggtcaaccaatctggacaactccgtggctagcatcgaagctaaagctaacgtgtgctgt
gttaaattcagtccaacctccaggtatcacctggcctttggctgtgcagatcactgtgtg
cattactatgatctacgcaacactaagcagccaatcatggtgtttaaaggccacaggaaa
gcagtgtcctatgccaagtttgtaaatggagaggagatagtttctgcgtcgacagacagc
cagctaaagctgtggaacgtaaacaaacctcactgcctgcgctccttcaagggtcacatt
aatgagaagaactttgttggcctggcgtccaatggagactatgttgcctgtggcagcgaa
aacaactctctgtatttgtactacaaaggactttccaagacactgttaacattcaagttt
gacactgttaagagtgtcctggacaaagacaagaaggaagatgacaccaatgagtttgtc
agcgccgtctgctggagggccctgtctgatggagagtcaaatgttcttatagctgcaaac
agtcaaggaacaatcaaggtacttgagctcgtttaa
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