Acetivibrio thermocellus DSM 1313: Clo1313_1671
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Entry
Clo1313_1671 CDS
T01933
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ctx
Acetivibrio thermocellus DSM 1313
Pathway
ctx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Clo1313_1671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctx03400
]
Clo1313_1671
Enzymes [BR:
ctx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Clo1313_1671
DNA repair and recombination proteins [BR:
ctx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Clo1313_1671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA_CRR
HTH_24
zinc-ribbons_6
TFIIE_alpha
RUBY_RBDX
TrwB_AAD_bind
DAP3
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ADU74728
LinkDB
All DBs
Position
complement(1954878..1957325)
Genome browser
AA seq
815 aa
AA seq
DB search
MNNIASIAISNTTRKFDKDYHYIIPDKYIGSIVPGMRVIVPFGKSNRLVEGYVLDVLESP
EVSSLKEISRVIDEKPVLKENMIRLACWMKRQYICTYYDTIKCMLPPGTGVSSTKVVRLK
KCEGGFKGNIKKIIDVLAECGGEMEYEELKKQVNTKTFAKYINNLKEQGCIEVHEEFTSK
VKEKYVRAVYLAKPWEEVVYDIETNKIKNIKHIRILELLAENEYIPVGDIVRFVGVSAGV
LDTLKKKGYLEFEDIEVTRDPAANMPYERTLPMKPTQEQQVVIDRVKSMLDSGEFNEVLL
HGITGSGKTEVYLQLIGHCISMGKQAIVLVPEISLTPQMVNRFKGRFGEDVAVMHSRLSL
GERYDQWRLVRDGRTKVVVGARSAVFAPFDNLGLVIIDEEHESSYKSEIVPKYHAAEIAR
QRCIMENAVLLYGSATPSVETYYRAKTGEIELLEMTKRANNMLLPEVKVVDMRNELNAGN
RSVFSRCLQNEIRKNIDSGQQTIVFLNRRGYATFILCRNCGYVLKCPYCDVSLTYHSHEE
RVICHYCGFTVKNPEHCPKCKSNHIRNFGTGTQKIEEEVKKQFEGCTVIRMDLDTTTGKN
SHEEILRKFRDDNINVMVGTQMIAKGHDFPNVTLVGVLAADSILNTGDYKAAERTFQLLT
QVAGRAGRGTIPGRVIIQTYNTDNYSIVCACEQDYVSFYNNEILVRKNLQYPPFIHLASV
ILSGVNDKQVLNRALFVKNELCRHFKDNGSTAQILGPLRAPLAKIKNKYRWRIVIKCEES
DKLIDVLTKVSDGYYSKSAKNSVALSVDINPVNML
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatattgcttcaattgccatcagcaataccacaaggaaatttgacaaggattat
cactatataattcctgataaatatataggcagtatagtaccgggtatgagggtgattgtg
cccttcggcaagtcaaaccggctggtggaaggttatgtcctggatgtgctggaaagccct
gaagtttcttcgttgaaggagataagcagggttatagatgaaaagccggttttgaaagaa
aatatgataagactggcatgctggatgaaaagacagtatatttgcacttattatgataca
ataaaatgcatgcttccaccgggaacaggagtaagcagtacaaaagttgtaaggctcaaa
aagtgtgaaggcggctttaagggaaatattaaaaagataattgatgttttggctgagtgt
ggcggtgaaatggaatatgaagaattaaaaaagcaggtaaataccaaaacctttgcaaaa
tacattaataatctgaaggagcaaggttgtattgaggtgcatgaagagtttacttccaaa
gtaaaggaaaaatacgttcgggcggtgtaccttgcgaagccttgggaggaagtggtttat
gatattgaaacaaacaagattaagaatattaagcatataagaatacttgaactgctcgct
gaaaatgagtacattccggtgggcgatattgtgcgctttgtcggtgtgtcggcaggcgtt
ctggatactttaaaaaagaagggatatttggagtttgaagatattgaagttacaagggac
cctgcagccaacatgccctatgaaagaacacttccaatgaaacctacgcaggagcagcag
gttgtaatagacagagttaaaagcatgctggattcgggagagtttaacgaagttttgctg
catggaatcacaggaagcggaaaaacggaagtttatcttcaattgataggacactgcatt
agtatgggaaagcaggctattgtcctggttcctgagatatcattaactccgcagatggtg
aacaggtttaaaggaagatttggtgaggatgtggctgtaatgcacagccgattgtccctg
ggtgaaagatatgaccagtggaggcttgtaagagatggcagaaccaaggttgtggtcgga
gcaaggtcggcagtgtttgcaccttttgataatcttggattggtgattatagatgaggag
catgaaagctcctataaatcggaaattgttcccaaataccatgcggctgaaattgcaagg
cagcgatgcatcatggaaaatgcggtgctgttgtatggttccgccacaccttcggtggag
acttattacagggcaaagacgggagaaattgagcttttggagatgaccaaaagagccaac
aacatgcttcttcccgaagtaaaagtcgttgacatgaggaatgaactgaatgccggaaac
aggtctgtgttcagccgatgtcttcaaaatgaaatcagaaaaaatattgacagcggacag
caaacaatcgttttcctcaacagaagaggctatgcgacgtttatactttgcagaaactgt
ggctatgttttaaaatgcccttattgcgatgtttcgctgacgtaccattcccatgaggag
cgggttatatgccattactgcggctttacagtaaagaacccggagcattgtccgaaatgt
aaaagcaatcatataaggaacttcggcacgggtactcagaagatcgaggaagaagtaaaa
aagcagtttgagggatgcacggtaataagaatggatttggacactaccacgggtaaaaac
tctcacgaggagatactcaggaaattcagggatgacaatataaatgtaatggttggaacc
cagatgattgccaaaggccatgattttcccaacgttacactggtgggagtacttgcggcg
gacagcattctgaacaccggagactacaaagcggcggaaaggacttttcaactgcttacg
caggttgccgggagagccggaaggggaacgattcccggaagagttataatccagacttac
aacacggacaactacagtattgtctgtgcctgtgagcaggactatgtatctttttacaac
aacgaaattcttgtaagaaaaaatcttcagtatccgccttttattcatttggcatcggtg
atactgagcggagtaaatgacaaacaggtgttaaacagggcactttttgtcaagaatgaa
ctgtgcagacattttaaagataatggttcaacggcacaaattttaggcccattgagagca
ccattggctaaaataaaaaataaatatagatggagaatagtaataaaatgtgaagaatca
gataaacttatagatgtactgacaaaagtttcagacggttattattccaaaagcgcgaaa
aattctgttgctttaagtgtggatataaatccggttaatatgttataa
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