Cotesia typhae: 141526328 Help Entry 141526328         CDS       T11099                                  Symbol Rrp6 Name (RefSeq) exosome component Rrp6   KO K12591   exosome complex exonuclease RRP6 [EC:3.1.13.-] Organism ctyp  Cotesia typhae Pathway ctyp03018   RNA degradation Brite KEGG Orthology (KO) [BR:ctyp00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     141526328 (Rrp6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ctyp03019]     141526328 (Rrp6) Messenger RNA biogenesis [BR:ctyp03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Exosome cofactors      141526328 (Rrp6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_pol_A_exo1 HRDC PMC2NT DH_ALS2 DUF4274 Vpu Motif Other DBs NCBI-GeneID:  141526328 NCBI-ProteinID:  XP_074097395 LinkDB All DBs Position Unknown AA seq 913 aa AA seqDB search MGENYNKNKLINGEQSNVDSPSPPAMEKLIPDFESFDDYVKAGFSGVGNGIKVANSLPKG ENFQYYSCFQAFKNFRIKQTKKISELMQSIVERTGTAGSMTDRDTEEKFKLLIDTNDILL DRTSVLLDEEAGIKKNLDVELIVTSTKTNNCGSWNTSTITQAPKAGGMTNAQAIRLLAAK NVQRPQLYFKDKIDNSSKPWEPRIKDKPNSLKPLGIYLIDGIKGQVFCHPYEFELDRFSP PEKQLKKEKPVKYKSLEQTPLIVIETLEDLQIMIKDLEKYDEIAVDLEHHSYRSFLGITC LMQISTRDTDYLVDTLLLRSELHLLNEIFTKPSVLKIFHGADLDIQWLQRDLSLYIVNMF DTHQAAKHLNLPFLSLAYLLKTHCKVDPNKHFQLADWRIRPLPEELMKYAREDTHYLLYI KDILRNALIDAANGQTNILKAVYDRGVDICKKIYEKPVCDETSCMNMYRKSQKMFNNKQL YALKHLFAWRDETARQEDDSTGYVLPNHMLLNIAETLPREMQGILACCNPIPPLVRQNLL KLHKLILKAREQPLINPVLQQELRPRLNLNNQSADSDIWMWSPHDNITGVDVQANLPCLI NDEDEEGSNMDTTRDDDKNNFKNSEQTAKGTHHQVTVFDSPANSDDEDSTARKKLLKAKK LFVSPFQRYKLVIPMIAAIEEQERKRREEEEKRSEETKTRLAEREAADNAKRVERIHQHF MNVVSQNDVSKKKIDDNLQVPLTAIPGTKKRKQDIKEEDDNNDDKSNIRQSKLDFTNPAP ANASTVVVNAFKKRQRNDEEDDDHNCQPKKKKMTRRQRKAFNKANNNSVSPVKPLNAFAN SDLKRKSQKALNRKELEEKGMLPRQDFNYKEVDFSSFQGGSKTSAKNAPFMQQQNKDKRK KGKGKKKKEKLGI NT seq 2742 nt NT seq  +upstreamnt  +downstreamnt atgggtgaaaattataataaaaataaattaattaatggtgagcaaagtaatgttgattca ccgagtccaccagccatggaaaaattaattcctgactttgaaagttttgatgactatgtt aaggctggatttagcggcgttggaaatggaatcaaggtggcaaacagtttgcccaaaggc gagaactttcagtattactcgtgcttccaagccttcaaaaattttcgcatcaagcaaact aaaaaaataagtgaattaatgcaatccatcgtcgagagaactggaaccgcaggcagtatg acagatcgtgacacagaagaaaaattcaagcttttaatagacaccaacgacattctcctg gatcgcacaagtgttctgctggacgaggaggcgggaataaaaaagaacctcgacgtagaa ttgatcgtgacatccaccaagacaaataattgcggctcgtggaatacatcaacaataacc caagcccccaaggctggaggcatgacaaacgctcaagcaataagacttctagccgctaaa aatgtccagcgaccccagttgtatttcaaagacaaaattgacaacagttcaaagccctgg gagccgcgaattaaggacaaaccaaacagcttgaagcctctgggaatttatttgattgac ggaattaaaggtcaagtcttttgtcatccctatgaatttgaactggaccgattttcaccg ccagaaaagcaattgaagaaagaaaaacctgtcaagtataaatctcttgaacaaactccg ttgattgttatagaaactctagaagatttacaaataatgattaaagatttggagaaatat gacgaaatagctgtcgatttagaacatcactcataccgttcattcttgggaataacgtgt ctcatgcaaatatcaacccgagacactgattacttggtagacactctgttgttgaggtca gaattacatttattaaacgaaatattcaccaagccgtcagtattaaaaatatttcacgga gcagacctggacatccagtggcttcaacgcgacctttcgctttacatcgtcaacatgttt gacactcatcaagcagccaagcacttgaacttgcctttcctcagcttggcttatttatta aaaacccactgcaaagtcgatcccaacaaacactttcagctggcagactggcgaatccgt cctttgcccgaggaactgatgaagtacgcgcgtgaagacacgcattacttactctacatc aaagacatccttcgaaatgccttgatcgacgcagcgaatggacagacaaatattctaaag gctgtctatgaccgtggagttgacatttgcaagaaaatttacgagaagccggtatgcgac gaaaccagctgcatgaacatgtaccgcaagagccagaaaatgttcaacaacaagcagttg tacgcgttgaagcatctgtttgcctggcgggatgaaactgccaggcaagaagacgatagc actggttacgttttgccgaatcacatgttgctgaatattgctgagaccttgccccgtgaa atgcagggtattctcgcgtgttgcaatcctattcctccgctagttaggcagaatttgttg aagctccataaattgattcttaaggcgagagaacagccgctgataaatcctgtgctgcag caggaattgaggcccaggttgaatttaaataatcaatccgctgattctgatatctggatg tggtcgccgcatgataatattactggagttgatgttcaagctaatttaccttgtctgatc aatgatgaggatgaagaaggctccaatatggacaccaccagggatgatgataaaaataat tttaaaaattctgagcaaactgccaaaggaacacatcatcaagtgacggtgtttgacagc ccggctaattccgacgatgaagactccactgccaggaaaaaacttttgaaagccaagaaa ttatttgtcagtccgtttcagaggtacaagctcgtcattccgatgattgctgcaatagaa gaacaagagcgtaagaggagagaagaagaggagaaacgctctgaggaaactaagacgaga ctggctgaaagagaggctgctgataatgccaagcgtgtcgaacgcattcatcaacacttt atgaatgttgtgagtcagaatgatgtaagtaagaagaaaattgacgacaatcttcaagtc cccctgactgcgatacctgggactaaaaaaagaaaacaagatattaaggaggaggatgat aataatgatgataagagtaatatcagacaaagtaaacttgatttcacaaatcctgcacct gctaatgcgagcacagttgttgttaatgctttcaaaaagcggcaaaggaatgatgaggag gatgatgatcataattgtcagccgaaaaaaaagaagatgactaggaggcagagaaaagct tttaataaggctaataataattcagtcagtcctgttaaaccattaaatgcttttgcaaat tctgacttgaagagaaaatcgcaaaaggctttgaatagaaaagagttggaagaaaagggt atgctacctcgacaagatttcaattataaagaagttgatttctctagttttcagggaggt agtaaaacttctgctaagaacgcgccttttatgcaacagcagaacaaagacaagagaaaa aaaggcaaaggcaaaaagaagaaagaaaaactaggaatatga

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