Cotesia typhae: 141526438
Help
Entry
141526438 CDS
T11099
Symbol
Not1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
ctyp Cotesia typhae
Pathway
ctyp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141526438 (Not1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctyp03019
]
141526438 (Not1)
Messenger RNA biogenesis [BR:
ctyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141526438 (Not1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
141526438 (Not1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
HTH_upst_double_PIN
PAT1
SOG2
Motif
Other DBs
NCBI-GeneID:
141526438
NCBI-ProteinID:
XP_074097568
LinkDB
All DBs
Position
Unknown
AA seq
2495 aa
AA seq
DB search
MNLDSLSFTLTQINYLIVNLNKKNYRDSTEEISVLVRWKGLEADRHLLRCLFSHIDFSTG
ETPNTSSKDYYQVQLLKQECTNILGKPSLVSNLCYAIDHPLHHQKILKPSLKFFLHLRRV
LNLTLVQEIVFAIALQHSENAELRALALEEVKKQLPDLINNYIQSADSTGSKQQEDGLHD
SSPEVLHLILIETLKDQNSYGLSSETKEKFLKNLKRDFPRELVPVVLAPLLYPGDGEITH
VPNELNMATNQMDANSLVELIMELGYGFTNNVEECRAALTGLGAREISPLAAARVLAHMA
RTYSGLDDAGGLQSFWSISSNNADGNKDKSDGNPPSTWNVEVFVQTLKEIQSTLSWNEVI
VKLDHPDFHIKNRQSLNLLVIGLRLGLQLQGFPLDVFPVELFYRHWDNVEGQFSLIQQIL
KNPDIFCFADYPYHSVTVDILKAAPESDSKEAQTWRSLNVVELLLHMAERGLNTPVQDIF
KWPIQHCPDVLVLALLQINPPITMLRQELLSTLMPTFLNNHPNSAVILHHAWHANNLKIK
SIIMHAMADWYLRGDNDQTRLSRILDVAQDLKALSALLKAQSFPFVIDLACLASRREYLK
LEKWLGDKIRDHGEIFIAACVKFLQRRCPQVMGPGIKEDTTIPKASQLPQETLTTILMVL
QPCTGSLSQELADTILTMIGNCSMMLKTNLNRPPPPGVLRHPALDVFNPVKLAAPLFPTK
PIDTLSNLSSGLASMGIGSGLGPPSTSAFNLPGALGPLVSAPGSPSRLMGPSPNPFPMMP
MSSQIHSGPVGTQSTAVIPGAASIGGNGRLGPPANIEKTRIPEISNLFPDMPQIVSKDIE
DEANSYFMGIYNHSPHQTLSIDEVLDILKKFQNSTIKREHDVFQCILRNLLEEYRFFPQY
PEKELHITAQLFGGIIDRGLVNNYMTLGIALRFVLDALRKPEGTKMYFFGLAALDRFKSR
LKEYSTYCEHVRAIHHFLDFPSHLVEYIEFGLSGQEPPHKPQGPIYPKTHPLMINQAATA
YKSITTTTATSNTQSKPSTTPTTSMSARPSIANATNIDTLLVATDKEEMKITIPPEAMQD
KTAFIFNNLSQINLQAKCDEIREIVTEEFWPWIAQYLVMKRASIELNFHVLYSNFLDYLK
VPEVNRLVTRETFRNIKVLLRSDKGIANFSDRSLLKNLGHWLGMLTLGRNKPILQVDIDL
KSLLVEAYNKGQQELLYVVPFVAKVLESCAKSRVFRPPNPWTMSIMNVLAELHQEPDLKL
NLKFEIEVLCKNLSIDVSELKPAIYLKDPEKIRSIEYQLSQPNKKSEASHSTQQQQQQQQ
QQQHHQQQQQQQQQQQQQQQQAQQQAQQQQQQQQQQQAQQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQLAQQQSQQQQQQQQQSSQQSTMEELVGSSAPGGVISQPQPANTTPSLPTGPP
EPRFNYMDINVSNVANVAQHISINNQLPLLQASPHLKQFIRPSIERAIQEWIHPVVDRSI
KIALTTSEQIARKDFALDPDETRMRQAARHMVRNLVAGMAMITCRDQILASISTNLKQAF
LAALMGSTQQQKDLVEQAANVLSGDNMELACAFVQKTAIEKAMPEMDKRLLNEIELRKIA
RQEGRRHFDPVAKYQAERMPEQIRLKAGGVTPQQMAVYEEFARNIPGFLPLSERETQALF
IPKPINEPTAVTAFASNPAVTLPTQQVAVYANTAVNNDEVGTMLEKLASEVELLLTSTAA
PPQQLTGLHALLESIILTRRSRDAGAAMALLKRAVDGLLESPSASSSTIESELILRYREL
HLRILKCLQDPRAYGLQWTNKNVSRVWTDSRDECRFNFEAVDCLIRSHLISLPQFDMSLA
QAMEAGSAMAVAFAMQLVQVYLIDERQTTHVNESDLYNVLESLARMAHHRATPEGISVFR
LTSVMESLRANHESGVLADRSSVGPTAHIHSGISQVRARDFDDPPGLMEKTEYLLREWVT
MHHSPNNSRDPTKAFGLFVHQMNIHGILKTDDLITRFFKLSTQMCVDLCYRALAEPNTAV
SAVRAKCFLTLDAFVKLVALLVKHSGDTSNTHTKINLLNKVLGIVAGVLLQDHEMRGTDF
QQLPYQRIFIMLFLELCAPEPVLEAVNYQVLTAFCHTLHILRPAKASGFCYAWLELVSHR
VFIGRMLAITPQQKCWGMYAQLLIDLFRYLAPYLRNAELAKPVLYLYKGTLRVLLVLLHD
FPEFLCDYHYGFCDAIPPNCIQMRNLILSAFPRNMRLPDPFTPNLKVDMLQEIALAPRVL
TNFASIIQPLSFKKELDSYLKARAPVTFLSELRSNLQVSQEAGMRYNIPLMNALVLYVGT
QAITFIRNKGHTPNMSTIAHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYF
SCTLLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPTYKFWTHEFVH
CAPEIEKLFESVARSCMVQKQVLSTQSTQEPELPE
NT seq
7488 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggactcgttatcttttactttaacacaaataaattatttaattgtaaattta
aataagaaaaattatcgcgacagtaccgaggaaatatcagtcttagtacggtggaaaggt
ctagaggcagacagacatttgttgcgctgtttgttctcgcacattgacttttctacagga
gaaacgccaaacactagctccaaggattattatcaagttcaattgctcaaacaagagtgt
acaaatatccttggaaaaccgtcgttggtctcaaatctctgttacgctattgaccatcct
ctccatcatcaaaagattttgaaaccatcgttgaaattttttcttcacttacgacgagta
cttaacttaactctcgtacaagaaattgtttttgccattgcattacagcactcagaaaac
gctgagttgagagcattggcacttgaagaagttaaaaaacaacttccagacttgataaat
aattacatacagtcagcagacagtactggcagtaagcagcaggaggacgggctccacgat
tcctcgccggaagtgttacatttgatactcattgaaacattgaaagatcaaaattcttac
gggctttcgtcggagactaaagaaaaatttttgaaaaatttgaaacgtgattttccccgt
gaactggtaccagtggtgctagcaccactattatatccaggagacggggaaattactcac
gtacctaacgaactcaatatggccaccaatcaaatggacgccaactcgttagtcgagttg
ataatggaattgggatatggatttactaacaatgtagaagaatgtcgcgcagccttaact
ggtttaggagcgcgagaaatatctccattggctgcagcacgcgtcctggctcatatggca
cgaacgtacagtgggttagacgatgctggtggcttacagtcattttggagtatttcatca
aacaatgctgacggtaataaagataaatcagacggtaatccaccaagtacatggaatgtt
gaggtatttgtacaaacgttaaaagaaattcaatcaacattatcatggaatgaagtaatt
gttaaattagatcatccagattttcacattaaaaatcgtcaaagtttgaatcttttggta
attggtttaagactcggattacaattacaaggttttccactggatgtttttccagttgaa
ttattttatcgtcattgggataatgttgagggacagttttctttaattcagcaaattttg
aaaaatcctgatatcttttgtttcgctgactatccctatcattcggtgacagttgatata
ctgaaagctgcaccggaaagcgacagcaaagaagcccaaacctggcgatcacttaatgta
gtagagcttttacttcatatggctgagcgaggactcaatacacctgtacaagacatattt
aaatggccgatccaacactgtcccgatgtacttgttttagcgttactccaaattaaccca
ccgattacaatgttacggcaagaattattaagcactctgatgccaacattcttgaacaat
catccgaattcagcagttattttacaccacgcttggcatgctaataatctcaagataaag
tcgataataatgcacgctatggctgattggtatttacgcggtgataatgatcagacaaga
ttatcgcgaattttagacgtcgctcaagatctaaaagctttatcagcattattaaaggca
caaagttttccatttgttatcgatcttgcttgtttggcatcacgacgagagtacttgaaa
ctcgaaaagtggcttggagataaaatacgtgaccacggtgaaatatttatcgcggcatgt
gttaaattcttacaacgacgatgcccacaagtaatgggaccaggtattaaagaagacaca
actatacccaaggctagtcaactgcctcaagaaacgcttacaactattttaatggtccta
caaccttgcactggaagtctatctcaagaactagccgatactatacttacgatgatagga
aactgcagtatgatgttaaagacaaatttaaacagaccaccgcccccaggagtgctgcgt
catcctgcattagacgtatttaatccagttaaattggcagcgccattgtttccaacaaaa
cctattgacacactaagtaacttgagctctggattagcttcaatgggtattggatctggt
ttaggacccccgagtacctcagctttcaatttacccggtgctttaggtcctttggtatct
gcaccaggatctccctcgaggctaatgggtccatcaccaaatccatttccaatgatgcca
atgtcttcgcaaattcattctgggcctgtcggtactcagagcactgctgtgatacccggt
gctgcgtcaatcggtggtaacggacgtttaggcccaccggcaaatattgagaaaactaga
atacctgaaatatcaaatttatttcctgacatgccacaaatagtgtctaaagatattgaa
gatgaagccaacagttattttatgggtatttacaatcattcacctcatcaaactttatca
attgatgaggtacttgatatattgaaaaaatttcagaattctacaataaaacgcgaacat
gacgtatttcaatgtatattacgtaatttattagaagaatatcgtttctttccgcagtat
cctgaaaaggaacttcatatcactgctcaattatttggcgggattattgatcgtggattg
gtaaacaattacatgacattgggaatagcgcttcgatttgttttagatgcattgagaaaa
ccagaaggcactaagatgtatttcttcggtttagcagctcttgacagattcaaaagccgt
ttaaaagaatattcaacttattgcgaacatgtaagggctattcatcattttcttgatttt
ccatctcatttagtcgagtacattgagttcgggctgagcgggcaagagccgcctcataaa
cctcagggacctatttacccaaaaacacatcctcttatgataaaccaagctgcgactgcc
tataaatccataacgacaacgactgctacgagcaacacacagtcaaaaccatctacaacg
ccaacaacttcgatgtctgcccggccttcgattgcaaatgcaacaaatatcgatacactg
cttgttgctactgataaagaagaaatgaaaataacaatacctccagaagcaatgcaagac
aaaacagcatttatttttaataatttgagtcagattaatttacaagctaagtgtgatgaa
atacgtgaaattgtcactgaagaattctggccgtggattgctcagtacttggtaatgaaa
cgtgcgagtattgaattgaattttcatgtactttattcaaattttcttgactatctaaaa
gtaccagaagttaacagattagtaacaagagagacttttaggaatattaaagttttatta
cgcagtgataagggtattgccaatttttctgatcgttctttattgaaaaatctcggacat
tggctcggtatgttgacacttggaagaaataagccaatcctacaagttgacattgattta
aaaagcttactggtagaagcgtataataaaggtcaacaagaattgttgtacgtcgtgcca
tttgtcgctaaagttttagaaagctgcgccaagagtcgtgtttttcggccaccaaaccct
tggaccatgtctataatgaatgtcctcgctgagttacaccaagagccagatttgaagctg
aatctcaaatttgaaatagaggttttatgtaaaaatcttagtatcgatgtgtcggagttg
aaacctgcgatttatctgaaagatccagagaagataaggagtattgagtatcaattgtcc
caacctaacaaaaagtctgaggcgtctcattctactcaacaacagcagcagcaacaacaa
caacaacaacatcatcagcagcaacagcaacaacagcagcagcaacaacaacagcagcag
caggcacaacaacaagctcagcaacaacaacaacaacagcagcagcagcaagcacagcaa
caacaacaacagcagcagcaacaacagcaacaacaacaacaacaacaacaacaacaacaa
caacaacaacaacaacagcaacaattggctcaacaacaatcacagcaacagcagcagcaa
caacaacagtcgtctcaacaaagtacaatggaagaattggtcggatcttcagcacctgga
ggtgttatttctcagcctcagccggctaataccactccatctcttcccaccggtccacca
gagccccgatttaattacatggacatcaatgtatccaatgtagccaacgttgctcaacat
ataagtatcaacaatcagcttccgcttttgcaagcaagcccacacttgaaacaatttatt
cggccttctatcgagcgtgcaattcaagaatggatccatcctgttgttgatcgttctatt
aaaatagctcttaccaccagtgaacagattgctcgaaaagattttgcactagatcctgat
gaaactaggatgcgacaagcagcgcgtcatatggtaaggaatttagttgctgggatggca
atgattacttgtcgagatcaaatattggcatctattagcacaaacttgaagcaggcattt
ttggcagcactgatgggctctacgcaacagcaaaaagatcttgtagaacaggcagcgaat
gtcctttctggtgataatatggaattggcgtgtgctttcgtccaaaaaacggctattgaa
aaagcgatgccggaaatggacaaacgactgctgaatgaaattgagcttagaaaaatagct
cgtcaagaaggacgtcgtcactttgatcctgtggctaaataccaagccgagcgtatgccc
gaacaaattcgcttgaaagccggaggagttactcctcagcaaatggctgtctacgaagag
tttgcgagaaatattccaggatttttgccgctatctgagcgtgaaacacaagctttgttt
atacctaagccgataaatgaaccgacagcagtgacagcttttgcttcaaaccccgccgta
actttaccaacgcaacaagtcgctgtgtatgcaaacacagctgttaacaacgacgaagta
ggaacaatgctagagaagcttgccagcgaagttgaattacttctgacgagtacggctgcc
ccgccacaacaactcacaggtctccatgcgcttctggagtctataatcctcaccagaagg
tctcgtgacgccggtgctgcaatggctctattgaagagagctgttgatggacttttagag
agcccctcagcttcaagcagtactattgagtcagaactgattcttcgttatcgtgaattg
catcttagaattctaaaatgtcttcaagacccacgtgcttacggcttacagtggacaaac
aaaaatgtatcgcgtgtatggaccgacagcagagatgaatgtcgttttaactttgaagcc
gttgactgtctcatcaggtcacatttgataagccttcctcaatttgacatgtcactggct
caggctatggaagcaggtagtgcaatggccgttgccttcgccatgcagttagtccaggtc
tacttgatcgacgaaagacaaactacccacgtaaatgagtctgacttgtacaacgttctt
gaatccttagcgcgaatggctcatcatcgcgcaacacctgaaggcatctctgtattccgt
ctcaccagtgttatggaatctctacgtgctaaccacgagtcaggtgtacttgctgatcgc
tcatccgtaggaccaactgcccacatacactcgggaatttcacaagtcagagcccgtgat
ttcgacgatccaccaggactcatggaaaaaacggagtacctgttgcgcgaatgggtaacg
atgcatcacagccccaacaactcgcgagaccccaccaaagcatttggtctctttgtccat
cagatgaatatccacggtatcttgaagacagacgatctaatcacgcgcttcttcaagcta
agcacccaaatgtgcgtggatctttgctaccgtgcgctagctgagccgaatacagcggta
tcagccgtacgagccaagtgtttcttgacgcttgacgcctttgtcaagttggtagcttta
ctggtcaagcattctggcgatacctcaaacactcacacaaaaataaacttacttaacaaa
gttctaggtattgtagctggtgtcctgctgcaagatcatgaaatgcgtggtactgatttc
caacaactcccgtatcaacgcatctttataatgctgtttttggaactgtgtgctccagaa
cccgtcctcgaggctgttaattaccaagtactcactgcattctgtcacacacttcacata
ttgcgtccagccaaggcctcagggttctgctacgcgtggctagaactcgtgtctcatcga
gtttttattgggcgtatgctggcgataactcctcagcaaaaatgctggggcatgtacgca
caactgctgattgatctgtttagatatctggcaccgtatttacgcaacgctgaactcgcc
aagccagtactgtatctctacaaaggaactcttagagttttattggtactgttgcacgat
tttccggaattcctttgtgattatcattacggattctgtgatgcgataccgcccaactgt
atccagatgagaaatttaattctcagcgcattcccgagaaacatgcggctcccagacccg
tttactcccaacctgaaggtcgatatgctgcaagagatagcacttgctccgcgagtactc
acaaactttgcgtcgataatccagccgctgagttttaaaaaggaacttgattcttatctc
aaggctcgcgcacctgtcaccttcctgtcagagctgagaagtaacttacaggtgtctcag
gaagctggaatgcggtacaacatacccctgatgaatgcgctggttttgtacgtgggaact
caagcgattactttcattcgtaacaaaggacatacaccgaatatgtcgactatcgctcat
tctgctcacatggacatcttccaaaatctcgccgttgatctcgacaccgagggacggtac
ttgttcttgaacgctatcgctaatcaactgcgttatccaaacagtcacactcattacttc
agttgtacattattgtatttgttcgctgaagctaatactgaagctattcaggaacaaata
actcgagtgcttttggagagattgatcgttaacagaccacatccttggggcttacttatt
acttttattgagcttattaaaaatcctacgtataaattttggacccatgaatttgttcat
tgtgcacccgaaattgaaaaattatttgagtctgttgcgagatcatgtatggttcaaaaa
caagtactatcaacacaatcaacacaagaaccagaattaccagagtga
DBGET
integrated database retrieval system
