Corynebacterium urealyticum DSM 7111: CU7111_0718
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Entry
CU7111_0718 CDS
T02457
Symbol
lig
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cua
Corynebacterium urealyticum DSM 7111
Pathway
cua03030
DNA replication
cua03410
Base excision repair
cua03420
Nucleotide excision repair
cua03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CU7111_0718 (lig)
03410 Base excision repair
CU7111_0718 (lig)
03420 Nucleotide excision repair
CU7111_0718 (lig)
03430 Mismatch repair
CU7111_0718 (lig)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cua03032
]
CU7111_0718 (lig)
03400 DNA repair and recombination proteins [BR:
cua03400
]
CU7111_0718 (lig)
Enzymes [BR:
cua01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CU7111_0718 (lig)
DNA replication proteins [BR:
cua03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CU7111_0718 (lig)
DNA repair and recombination proteins [BR:
cua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CU7111_0718 (lig)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CU7111_0718 (lig)
MMR (mismatch excision repair)
DNA ligase
CU7111_0718 (lig)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CU7111_0718 (lig)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
HHH
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
AGE36312
LinkDB
All DBs
Position
complement(859152..861290)
Genome browser
AA seq
712 aa
AA seq
DB search
MSTQYDSESSPAASNSGSADPALAELAQQWQSLADQVRHHREVYYYGNPEISDAEFDALF
TRLQEFENSHPEAVTGPSPTTEVAPSPPESSPFRNVDHQEPMLSLDNVFDTEQLSSWLDR
TPAKTYLTELKIDGASINLLYRNGVLELALTRGDGTTGEDITHNARTLSDIPARLQSSEK
FPVPELVEIRGEVFIRVEDFAKMNAQRQAEGLKMFANPRNAAAGAMRQKDPAETARRPLR
LICHGIGAREGFTPASQHAAYEALAAWGLPVSPYTKQVHSAKEVLEQVAYWADHRHDADH
EMDGLVIKVDDTESQQRLGTTSRAPRWAIAYKYPPEEARTRLHDIRLGIGRTGRATPYAV
MEPKYVAGSTVTMATLHNPSEAHRKGVRLGDEIMIRKAGEVIPEVLGPVEDARSGAEREF
LFSSLCPECGTSLAPARGDDADWRCPNTRYCPGQLHTRLTYIAGRGAFDIDALGEKAAYD
LIHSGVLPDETGLFSLTEEDLRRTDAYTTKSGALNKQGETLLTTLAAAKEVDLWRVIVAL
SIRHVGPTAAKALANHYGSIPDVAAADVETMSTVDGVGPIIAESVRDWFAVSWHQEIVDA
WAAAGVRMEQDVTEQPSADAAGSIQADLLAGLSIVVTGTLEDFDRSSAREAIESRGGKAT
GSVSKKTDYLVAGAKAGSKLTKAEELSIPVLDEAGFHKLLNQGPGEGDKSEA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgagcactcaatacgattccgaatcctcgcccgccgcaagcaattccgggtccgccgac
ccggcccttgctgagctggcccagcagtggcagtccctcgcggaccaggtcaggcaccac
cgcgaggtgtactactacggcaatccggagatctccgacgccgagttcgacgccctgttc
acccgcctgcaggagttcgagaactcccaccccgaggcggtgaccggccccagccccacc
accgaggttgccccctcccctccggagtccagcccgtttcgcaacgtggaccaccaggag
ccgatgctctcgctggataatgtcttcgacaccgagcagctgagctcctggctggatcgc
accccggccaagacctacctcaccgagctgaagatcgacggcgcgtcgatcaacctgctg
taccgcaacggtgtcctggaactcgcgctcacccgcggcgacggcacgaccggggaggac
atcacccacaacgcccgcactctctccgatatcccggcgcgcctgcaatcctccgaaaag
ttcccggtgccggagctcgtggagattcgcggcgaggtcttcatccgcgtggaggacttc
gcgaagatgaacgctcagcgccaggcggaggggctgaagatgttcgccaatccgcgcaat
gccgcggccggcgcgatgcgccagaaggacccggcagagaccgcccgccgcccgttgcgc
ctgatctgccacggcatcggcgctcgtgagggattcaccccggcctcccaacacgcggcc
tacgaggcgctggctgcctggggtctaccggtgagcccgtataccaagcaggtgcacagc
gccaaggaggtcttagagcaggtcgcctactgggcggaccaccgccacgacgcggaccac
gagatggatggcctcgtcatcaaggtggacgacacggagtcccagcagcggctcggcacg
accagccgcgccccgcgctgggcgatcgcctataagtacccaccggaagaagcccgcacc
cggctgcacgacatccgtctagggatcgggcgcaccggccgggcgaccccgtatgcggtg
atggaaccgaaatacgttgcgggctcgaccgtgaccatggcgaccctgcacaacccttcc
gaggcccaccgcaagggcgtgcgcctcggcgacgagattatgatccgcaaggccggggag
gtcatcccggaggtgctgggcccggtggaggatgcccggagtggtgcggaacgcgagttt
ctcttcagcagcctgtgcccggagtgcggcacttccctggccccggcccgcggagacgat
gcggattggcgctgcccgaatacccgctactgccctggtcagttgcacacccgcctgacc
tatatcgccggccgcggtgccttcgacatcgatgccctcggcgagaaggcggcctatgac
ctcatccattccggcgtgctgccggacgagacggggctgttttctctgacggaggaggat
ctgcgccgcacggacgcgtatacgacgaagtccggcgcgctgaataagcagggcgagacg
ttgttgacaacgctcgcggcggccaaggaggtcgacctgtggcgggtcatcgtcgccctg
tccatccggcacgtcggtccgaccgcggcgaaggccctggctaatcactacggttccatt
ccggacgtcgccgccgccgatgtggagacgatgtccaccgtcgacggggtgggccccatc
atcgccgagtccgtgcgtgactggttcgcggtctcctggcaccaggagatcgtcgatgcc
tgggcggccgctggggtgcggatggagcaggacgtcaccgagcagccttccgccgacgcg
gccgggtctattcaggccgacctgctggccgggttgagcatcgttgtcacgggcacgctg
gaggacttcgaccgcagcagtgcgagggaggccatcgagtcccgcggcggaaaggccacc
ggcagcgtgtccaagaagacggactatctggtcgctggggccaaggccggctcgaagctc
acgaaggccgaggagctgagtattccggtgctcgacgaggccggtttccacaagctgctg
aaccaggggccgggcgaaggcgacaagagcgaggcttag
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