Cuculus canorus (common cuckoo): 104056158
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Entry
104056158 CDS
T08597
Symbol
CACNA1A
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04010
MAPK signaling pathway
cuca04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104056158 (CACNA1A)
04020 Calcium signaling pathway
104056158 (CACNA1A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cuca04040
]
104056158 (CACNA1A)
Ion channels [BR:
cuca04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104056158 (CACNA1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
104056158
NCBI-ProteinID:
XP_053907732
LinkDB
All DBs
Position
30:1692834..1729824
Genome browser
AA seq
2305 aa
AA seq
DB search
MPRFGDDGPGRYGPGGGGSGPGAAAGPRGAGGPRPGGPPGAQRMYKQSMAQRARTMALYN
PIPVRQNCLTVNRSLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPD
EDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILS
TVGSQFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAII
GLEFYMGKFHTTCFDLVTDEIKVEVPCGTDEPARICPNGTKCKKYWEGPNYGITQFDNIL
FAVLTVFQCITMEGWTDLLYYSNDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAK
ERERVENRRAFLKLRRQQQIERELNGYMEWISKAEEVILAEDEPEGDPRRPFDALRRATG
KKSKTELLSPEEGEEQLGDIAALGSPFARASLKSAKLENASFFHKRERRMRFHIRRVVKT
QAFYWTVLSLVALNTLCVAIVHYNQPDWLSDFLYYAEFIFLGLFMSEMFIKMYGLGTRPY
FHSSFNCFDCAVIIGSIFEVIWAVVKPGTSFGISVLRALRLLRIFKVTKYWASLRNLVVS
LLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDDGTPPTNFDTFPAAIMTVFQILT
GEDWNAVMYDGIKSQGGVKGGMVFSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKD
EQEEEEAANQKLALQKAKEVAEVSPLSAANMSVTLKEQQKNQKASKSVWEQRTSELRKQN
LLASREALYSELDPEERWKVPYARHLRPDIKTHLDRPLVVDPQENRNNNTNKTRPGEPDP
RFGQPRADELRRPLRYPEPGVPRPGEPVGHRPRSSSREPEQEPSQERGDAERLKALERRH
RSGGSREGRTGSPQAEREHRRHRAHRRVAEEGEEGGRPERRPRHREGGRPARGEGDAEHG
DGERRRRHRHGTPGAYDGEGRRDDKERRHRRRRDPQPPGAPAGPTLSTTRPIQQDVGRRD
PPRGRGHRQHQEQQTGHGGAPCAPLHGQPHRLPPRRPPPTPNPGIPNEPSKGGVKPEHTA
VEIPPPLPPPPPGALVQVNRNANPEPLPRKEEEEKKEEGEEGEENGPKPMVPYSSMFILS
TTNPFRRLCHYIVNLRYFEMCILLVIAMSSIALAAEDPVQPNAPRNNVLRYFDYVFTGVF
TFEMVIKMVDLGLVLHQGAYFRDLWNILDFIVVSGALVAFAFTGSSKGKDINTIKSLRVL
RVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGKFFYCTD
ESKEFEKDCRGEYLVYEKDNEVKAQRREWKKFEFHYDNVLWALLTLFTVSTGEGWPQVLK
HSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEEYSL
EKNERACIDFAISAKPLTRHMPQNRQSFQYRMWQFVVSPPFEYTIMAMIALNTIVLMMKF
YDASDTYEYVLKMFNNVFTSLFSLECLLKIMAFGVLNYFRDAWNIFDFVTVLGSITDILV
TEFGNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYA
IIGMQVFGNIGIEEEDDESAITQHNNFRTFFQALMLLFRSATGEAWHEIMLSCLSGKPCD
QNSGIKEDECGNEFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEY
VRVWAEYDPAAWGRLTLMDMYEMLRHMSPPLGLGKKCPPRVAYKRLLRMDLPVADDNTVH
FNSTLMALIRTALDIKIAKGGADKQQMDAELRKEMIAIWPNLSPKNLDLLVTPHKSTDLT
VGKIYAAMMIMEYYRQSKAKKLQAMREEQNRTPLMFQRMEPPSPTQEGTPGPDAGTSAEP
GTGLAVRDGGLKESESWVTQRAQEMFQKTGTWSPERGHPEDMPNSRPNSQLVEMREMAKD
GYSDSDYLPMEGHGRAASMPRLPAENQRRKVRSRGNNLSADGWRHEETQTGRRTQTISDS
SPMKRSASMLGHPRARGVRLDDYSLERVTPEDGQRHHQRRRDRGHRSERSLSRYTDVDTG
LGTDLSVTTQSGDAPPKDRDPERGRPKDRKHRHHHHHHHHHHHGAGGDRERCPPPERPDY
GRPRDRRWSRSPSEGRDHTAPRQGSSSVSASPAPSTSGTSTPRRARRQLPPTPPHSAAAR
VLRVPRAPPRAPPPPRRLPPRGARAAPPAPAPPRGPPPARRARPPRPPPARSRRRLPNGY
YAGHGSGKGRPGLRDPYSETDDDCC
NT seq
6918 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcttcggggacgacggccccggccgttacgggcccggcggcggcggcagcggc
cccggggcggcggcggggcccaggggggcgggggggccccggcccgggggtccccccggg
gctcagaggatgtacaagcagtcgatggcccaacgggcgcgaactatggccctctacaac
cccatccccgtgcgccagaactgcctgacggtcaaccgctccctcttcctcttcagcgag
gacaacgtggtgaggaaatacgccaaaaagatcaccgaatggcctccttttgagtacatg
attttagccaccatcatcgccaactgcatcgtcctggcgctggagcagcacctgcccgac
gaggacaagacgcccatgtccgagcggctggatgacacggagccgtacttcatcggcatc
ttctgcttcgaggcggggatcaagatcatcgcgttgggcttcgccttccacaaaggctcc
tacttgcgcaacggttggaacgtcatggacttcgtggtcgtcctcaccggcatcctctcc
accgtgggctcccagttcgacctgcggacgctgcgagccgtgcgcgtactccggcccctc
aagctggtgtcggggatccccagtctgcaggtggtcctcaagtccatcatgaaggcgatg
atcccactgctgcagatcgggctcctgctcttcttcgccatcctcatcttcgccatcatc
ggcctcgagttctacatgggcaaattccacaccacctgcttcgacctggtcaccgatgag
atcaaggtggaggtgccgtgcgggacggatgagccggcgcggatctgccccaacggcacc
aaatgcaagaagtactgggagggccccaactatggcatcacccaattcgacaacatcctc
ttcgccgtcctcaccgtcttccagtgcatcaccatggaagggtggacagacctcctctac
tatagcaacgacgcctcagggaacacttggaattggctctacttcatccccctcatcatc
atcggctccttttttatgctcaacctcgtgctgggggtgctctccggggagtttgccaaa
gagcgggaacgggtggaaaatcgccgggcgttcctcaagctgcggcgccagcagcaaatc
gagagggaactcaacgggtacatggagtggatctccaaagcggaagaagtgatcctggcg
gaggatgagcccgagggggacccccggcgccccttcgatgcgctccggagggcaaccggc
aagaagagcaaaacggagctgctgagcccggaggagggagaggagcagctcggagacatc
gcagccctcggctcccccttcgcccgcgccagcctcaaaagtgccaagctggagaacgcc
tccttcttccacaaacgggagcgcaggatgcgcttccacatccgccgcgtggtcaaaact
caggccttctactggaccgtgctcagcctggtggcgctcaacacgctctgcgtcgccatc
gtccactacaaccagcccgactggctctccgacttcctctactatgcagaattcattttc
ttgggactctttatgtccgaaatgtttataaaaatgtacgggctggggacgcggccgtat
ttccactcatccttcaactgcttcgactgcgccgttatcatcggaagcatcttcgaggtg
atctgggctgttgtgaagccaggaacatccttcgggatcagcgtgctccgagctctcagg
ttactgcgcattttcaaagtcacaaagtactgggcttccctgcggaacttggtcgtctcc
ctcctgaactccatgaagtccatcatcagcctcctcttcctcctcttcctcttcatcgtc
gtcttcgcccttttggggatgcagctttttgggggacagttcaattttgatgatgggacc
ccccccaccaacttcgacactttcccagcagcaataatgacggtgtttcagatcctgaca
ggcgaagactggaatgcagtgatgtatgacgggatcaaatctcagggcggcgtcaagggg
gggatggtcttctccgtctacttcattgtcctcaccctcttcggcaactacaccctcctc
aacgtcttcttggccatcgcggtggacaacctggccaacgcgcaggagctcaccaaggac
gagcaggaggaggaagaagccgccaaccagaaactggcgctgcagaaggcgaaggaggtg
gctgaagtcagtccgctttccgcagccaacatgtccgtcaccttgaaggagcagcagaag
aaccagaaggcctccaagtcggtgtgggagcagcggacgagcgagctgcggaagcagaac
ctgctggcgagccgcgaggcgctctacagcgagctcgaccccgaggagcgctggaaggtg
ccgtacgcccgccacctgcgccccgacatcaaaacccacctggaccgcccgctggtcgtc
gacccccaggagaaccgcaacaacaacaccaacaagacgcgtcccggcgagccggacccg
cgcttcggccagcctcgtgccgacgagctgcgccggccgctgcgctacccggagcccggc
gttccccgccccggggagcccgtgggccaccggccgcgcagcagcagccgtgagcccgag
caggagcccagccaggagcgcggtgacgccgagcgcctcaaagccctcgaacggcggcac
cgctcgggcggcagccgtgagggccgcaccggttcgccccaagccgagcgtgagcaccgg
cggcaccgggcacaccggagggtcgctgaggagggcgaggagggcgggaggcccgagcgg
cggccgcggcaccgggaaggcgggcggccggcgcggggcgagggcgatgcagagcatggc
gatggtgagcggcggcggcggcatcggcacggcacgccgggcgcctacgatggcgagggc
aggcgggacgacaaggagaggcggcaccggcggcggagggacccccagccccccggggca
ccggcgggccccacgctctccaccacgcgccccatccaacaggacgtggggcgccgcgac
cccccccgtggccgaggccatcgacaacatcaagaacaacaaactggccacgggggagcc
ccctgcgcccccctccatgggcaaccacaccgcctgcccccccggaggccccccccgacc
cccaacccggggatccccaatgagcccagcaaggggggggtgaagccggagcacacggcg
gtggagatcccccccccgctgcccccgcccccccctggagccctggtccaagtgaacagg
aacgcgaatccggagccgctgccgcggaaagaggaggaggagaagaaggaggaaggagag
gagggggaggagaacggccccaagcccatggtgccctacagctccatgttcatcctctcc
accaccaacccgttccgccgtctgtgccactacatcgtgaacctgcgctacttcgagatg
tgcattctgctcgtcatcgccatgagcagcatcgccctcgccgccgaggaccccgtgcag
cccaacgccccccgcaacaacgtcctgcgctacttcgactacgtcttcacgggggtcttc
actttcgagatggtgatcaagatggtggatttggggctggtgcttcaccaaggtgcctat
ttccgcgacctctggaacatcctggacttcatcgtggtcagcggagcgctcgtcgccttc
gccttcactggcagcagcaaaggcaaagacatcaacaccatcaagtctctccgtgtcctc
cgcgtcctccggcccctcaagaccatcaagaggttgcccaagctcaaggccgtctttgac
tgtgtggtgaactccctgaagaacgtcctcaacatcctcatcgtctacatgctcttcatg
ttcatcttcgccgtggtggccgtccaactcttcaagggcaaattcttctactgcaccgat
gagtccaaggagtttgagaaggactgcaggggcgagtacctcgtctacgagaaggacaac
gaggtgaaggcgcaaaggcgggagtggaagaagtttgagttccactatgacaacgtcctc
tgggcactgctcaccctcttcaccgtctccaccggcgaggggtggccgcaggtcctcaag
cactcggtggatgccacctacgagaaccagggtccgagccccggctaccgcatggagatg
tccatcttctacgtcgtctactttgttgtcttccccttcttctttgtcaacatctttgtg
gccttgatcatcatcaccttccaggaacagggagacaagatgatggaagagtacagcctg
gagaagaacgagagagcctgcatcgacttcgccatcagcgccaaacccctgacgcggcac
atgccacagaaccggcaaagcttccagtaccgcatgtggcagttcgtggtgtcgccgccc
ttcgagtacaccatcatggccatgatcgccctcaacaccatcgtcctcatgatgaagttc
tacgacgcttcggacacctacgagtacgtcctcaagatgttcaacaacgtcttcacctcc
cttttctccctcgagtgtctcctgaagatcatggccttcggcgtcctgaattatttccgc
gatgcctggaacatcttcgacttcgtgacggttctgggcagcatcacggacatcctggtg
acggaatttgggaacaacttcatcaacctcagcttcctgcggctcttccgcgccgcgcgg
ctcatcaagctgctgcgccagggctacaccatccgcatcctgctctggaccttcgtccag
tctttcaaggcgctgccctacgtctgcctgctcatcgccatgctcttcttcatctacgcc
atcatcgggatgcaggtcttcggtaacatcggcatcgaggaggaggacgacgagtcggcc
atcacccagcacaacaacttccgcaccttcttccaggccctcatgctgctcttccggagc
gccacgggcgaggcgtggcacgagatcatgctgtcctgcctgagcgggaagccgtgcgac
cagaactcgggcattaaggaggacgaatgcggtaacgagttcgcctacttctacttcgtc
tccttcatcttcctctgctccttcttgatgctgaacctctttgtcgctgtcatcatggac
aactttgagtacctgacgcgcgactcctccatcttgggcccacaccacctggatgagtac
gtccgcgtctgggcagaatacgaccccgccgcctggggccgcctgacactcatggacatg
tatgaaatgctgaggcacatgtccccacccctgggtttaggcaagaaatgcccaccccgt
gttgcttataagcggctgctccgcatggatctgcccgtggccgacgacaacaccgtgcac
ttcaattccaccctcatggccctgatccgcaccgcgctcgacatcaagatcgccaaaggt
ggagcagacaaacagcagatggatgccgagctgcgcaaggagatgattgccatctggccc
aacctgtcccccaaaaacctggacctgcttgtcaccccccacaagtccaccgacctgacg
gtggggaagatctatgccgcgatgatgatcatggagtactacaggcagagcaaggccaag
aagctgcaggccatgcgggaggagcagaaccggacaccactgatgttccagcgcatggag
ccaccgtcgcccacacaggaggggacaccagggccggacgcggggacgtcggccgagccg
ggcacggggctggcggtgcgggacggaggcctgaaggagagcgagtcctgggtcacccag
cgcgcccaggagatgttccagaagacggggacctggagccctgagcggggacaccctgag
gacatgcccaacagccgccccaactcccagctggtggagatgcgtgagatggccaaggac
ggctactctgacagtgactacttgcccatggagggccacggccgtgccgcctccatgccg
cggctcccagctgaaaaccagcggaggaaggtccgatcccgcgggaataacctcagtgcc
gatggatggaggcatgaagagacacaaacaggccggcgcacgcagaccatctcggactcc
agccccatgaagcgctcggcctccatgctgggccacccgcgcgcccggggcgtccgcctg
gacgactactcgctggagcgcgtcacccccgaggacgggcagcggcaccaccagcgccgg
cgcgaccgtggccaccgctctgagcgctccctcagccgctacacagatgtggacacaggg
ctgggcacggacctcagcgtcaccacgcagtcgggggacgccccccccaaggaccgggac
cccgagcgcgggcgccccaaggaccgcaaacaccggcaccaccaccaccaccaccatcac
caccaccacggcgcggggggggaccgggagcgctgcccaccccccgagcgccccgactac
gggcgcccccgcgaccgacgctggtcccgctcgcccagtgagggccgcgaccacaccgcc
ccccgacagggcagcagctctgtcagcgcctcccccgcgccctccacctccgggacgagc
accccccgccgcgcgcgccgacagctgccgccgacccccccccactccgcggccgcgcgt
gtcttacgcgtcccccgggccccgccgcgcgccccccccccgccgcgccgcctccccccg
cgcggggcccgcgccgccccccccgccccggcaccaccccgaggccccccccccgctcga
cgggcgcggcccccgcggccccccccggcccggagccggcggaggttgcccaacggctac
tacgcggggcacgggagtggcaaagggcggccggggctccgcgatccctacagcgagacg
gacgatgactgctgctag
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integrated database retrieval system
