Cuculus canorus (common cuckoo): 104057207
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Entry
104057207 CDS
T08597
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104057207
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cuca02000
]
104057207
Transporters [BR:
cuca02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104057207
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
104057207
NCBI-ProteinID:
XP_053932190
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Position
11:complement(171166..242823)
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AA seq
620 aa
AA seq
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MTAEKTIPIINGKPEDALDQEASSTNLVHSNDKKVHERGHWNNKVEFVLSVAGEIIGLGN
VWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGI
GYATQVIEAHLNVYYIIILAWAIFYLFNCFTTELPWATCGHDWNTENCVEFQKLNMTNCS
QVSLQNATSPVMEFWERRVLAISDGIEHIGNLRWELALCLLAAWTICYFCIWKGTKSTGK
VVYVTATFPYIMLMILLIRGVTLPGAAEGIKFYLYPDLSRLSDPQVWVDAGTQIFFSYAI
CLGCLTALGSYNNYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQGVPIAEVAE
SGPGLAFIAYPKAVTMMPLSPLWAALFFMMLIFLGLDSQFVCVESIVTAVVDMYPKIFRR
GYRRELLILGLSIVSYFIGLIMLTEGGMYVFQLFDSYAASGMCLLFVAIFECVCIGWVYG
SNRFYENIEDMIGYKPLSLIKWCWMVLTPGICAGIFIFFLVKYKPLKYNNVYIYPDWGYG
IGWMMALSSMICIPLWIGIKLWKTEGTLIEKFRKLTTPSSDLKMRGKLGGGAYIAAINDC
DVKLKGDGTISTITEKETHF
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgaaaagactattcctatcattaatggcaaaccagaagatgctttggaccaa
gaagcctcaagtaccaacctcgtccacagcaatgataaaaaagttcatgaaagaggtcac
tggaacaataaggttgaatttgtgctttctgtggcaggggagattattgggttgggcaat
gtatggagattcccatatctttgctacaaaaatggaggaggtgctttcctcatcccctat
gtggttttcttcatttgctgtggaataccagtgtttttcttggagacggctttgggtcag
tttactagtgaaggaggcattacgtgctggaggaaagtttgccccctgtttgaaggcatc
ggatatgctacccaagttatagaggcacatctaaatgtatattacatcatcattttagcg
tgggccatcttctatttgtttaactgctttactacagagcttccttgggcaacctgtggg
catgactggaatacagaaaactgtgtggaatttcaaaaacttaatatgaccaactgcagt
caagtctctttacaaaatgccacttctccagtgatggaattctgggaacgcagggtgctg
gctatatctgatggtattgaacatattgggaatcttcgctgggagcttgcactgtgcctc
cttgctgcctggactatctgctatttctgcatttggaaaggaacaaagtctactggaaag
gttgtgtacgtaacagccacgttcccctacatcatgttgatgattcttctgattcgtgga
gtaacattaccaggtgctgctgaggggataaaattctacctgtaccctgacctttcccga
ctgtctgacccacaggtgtgggtggacgccggtactcagatatttttctcttacgcaatc
tgcttggggtgcctgacagccctgggtagttacaacaactacaataataactgctacaga
gactgcatcatgctctgctgcttgaacagtggcacaagctttgttgctggttttgctatc
ttttcagttcttggatttatggcttatgaacaaggtgtgcccattgcagaagttgcagaa
tcaggaccaggactcgcattcattgcttaccctaaagctgttaccatgatgcccctttct
cctctgtgggcagctctgttcttcatgatgcttatattccttggattagacagtcagttc
gtgtgtgttgaaagcatcgtgacagctgttgtagatatgtacccaaagattttccgcagg
ggctacagaagagagctgttgatcctcggcctttccattgtgtcatacttcattggccta
ataatgttaactgagggtgggatgtacgtcttccagttatttgactcttatgcagccagt
ggcatgtgccttctgtttgttgccatatttgagtgtgtctgcataggctgggtttatggc
agcaatcgcttttatgaaaacattgaagatatgattgggtacaaacctctctcactgatt
aaatggtgctggatggtcttaactccaggtatttgcgcaggaatcttcatcttcttccta
gtgaaatacaagcctttgaaatacaacaatgtgtatatataccctgactggggctatggc
atagggtggatgatggcactctcttccatgatctgcatccctttgtggattggcattaag
ctgtggaagacagaaggcactttgatagagaaattcaggaagttgactacacctagctca
gatctgaaaatgagaggcaaacttggaggaggagcctacattgcagcaataaatgactgc
gatgtcaaactgaaaggagatggcaccatttcaacgattacagaaaaagagacacatttc
tga
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