Cuculus canorus (common cuckoo): 104060254
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Entry
104060254 CDS
T08597
Symbol
NALCN
Name
(RefSeq) sodium leak channel NALCN isoform X1
KO
K21863
sodium leak channel non-selective protein
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cuca04040
]
104060254 (NALCN)
Ion channels [BR:
cuca04040
]
Voltage-gated cation channels
Sodium leak channel, non-selective
104060254 (NALCN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
PsaF
DUF5914
FAM165
Motif
Other DBs
NCBI-GeneID:
104060254
NCBI-ProteinID:
XP_053941346
LinkDB
All DBs
Position
1:49800822..50029829
Genome browser
AA seq
1738 aa
AA seq
DB search
MLKRKQSSRVEAQPVTDFGPDESLSDNADILWINKPWVHSLLRICAIISVISVCMNTPKT
FEHYPPLQYVTFALDTLLMFLYTAEMIAKMHIRGIVKGDTSYVKDRWCVFDGFMVFCLWV
SLVLQVFEIAELVDQMSPWGMLRIPRPLIMIRAFRIYFRFELPRTRITNILKRSGEQIWS
VSIFLLFFLLLYGILGVQMFGTFTYHCVTDDTQPGNVTWNNLAIPDTHCSRELEEGYQCP
PGFKCMDLEHLGLSRQELGYSGFNEIGTSIFTVYEAASQEGWVFLMYRAIDSFPRWRSYF
YFITLIFFLAWLVKNVFIAVIIETFAEIRVQFQQMWGSRSSTTSTATTQMFHEDAAGGWQ
LVAVDVNKPQGRAPACLQKMMRSSVFHMFILSMVAVDVIVAASNYYKGENFKRQYDEFYL
AEVAFTVLFDLEALLKIWCLGFTGYISSSLHKFELLLVIGTTLHIYPDLYHSQFTYFQVL
RVVRLIKISPALEDFVYKIFGPGKKLGSLVVFTASLLIVMSAISLQMFCFVEELDRFTTF
PRAFMSMFQILTQEGWVDVMDQTLNAVGHMWAPVVAIYFILYHLFATLILLSLFVAVILD
NLELDEDLKKLKQLKQSEANADTKEKLPLRLRIFEKFPNRPQMVKISKLPSDFTVPKIRE
SFMKQFIDRQQQDTSCLLRRLPSASSSSCDHSKKSAIEENKYIDQKLRKSVFSIRARNLL
EKETAINKILRACTRQRMLSGSFEGQPAKERSILSVQHHIRQERRSLRHGSNSQRISRGK
SLETLTQDHSNTVRYRNAQREDSEIKMIQEKKEQAEMKRKVQEEELRENHPYFDKPLFIV
GREHKFRNFCRVVVRARFNASKTDPVTGAVKNTKYHQLYDLLGLVTYLDWVMIIVTICSC
ISMMFESPFRRVMHAPTLQIAEYVFVIFMSIELNLKIMADGLFFTPTAVIRDFGGVMDIF
IYLVSLIFLCWMPQNVPAKSGAQLLMVLRCLRPLRIFKLVPQMRKVVRELFSGFKEIFLV
SILLLTLMLVFASFGVQLFAGKLAKCNDPHIISREDCHGIFRINVSVSKNLNLKLRPGEK
KPGFWVPRVWANPRNFNFDNVGNAMLALFEVLSLKGWVEVRDVIIHRVGPIHGIYIHVFV
FLGCMIGLTLFVGVVIANFNENKGTALLTVDQRRWEDLKSRLKIAQPLHLPPRPDNDGFR
AKMYDITQHPFFKRTIAVLVLAQSVLLSVKWDAADPVTVPLATMSVVFTFIFVLEVTMKI
IAMSPSGFWQSRRNRYDLLVTSLGVIWVILHFALLNAYTYMMGACVIVFRFFSICGKHVT
LKMLLLTVVVSMYKSFFIIVGMFLLLLCYAFAGVVLFGTVKYGENINRHANFSSAGKAIT
VLFRIVTGEDWNKIMHDCMVQPPFCTPDNSTYWKTDCGNYAGALMYFCSFYVIIAYIMLN
LLVAIIVENFSLFYSTEEDQLLSYNDLRHFQIIWNMVDDKREGVIPSFRVKFLLRLLRGR
LEVDLDKDKLLFKHMCYEMERLHNGGDVTFHDVLSMLSYRSVDIRKSLQLEELLAREQLE
YTIEEEVAKQTIRMWLKKCLKRIRAKQQQSCSIIHSLRESQQQELSRFLNPPSIETTQPS
EDMNAINQDNSAQPETSSQQQLLSPTLSDRGGYRQDSADAGKPQRKFGQWRLPSAPKPIS
HSVSSVNLRFGGRSTMKSVVCKMNPMSDAASCGSEVKKWWTRQLTVESDESGEDLLDI
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaaggaaacagagttcaagggtggaagcccagccagttacagatttcggtcca
gacgaatctttgtcagacaatgcagatattctgtggattaacaaaccatgggtacactct
ttactacggatctgtgccatcatcagtgttatttctgtttgtatgaacactccaaagacc
tttgagcactatcctcctctccaatatgtgacgtttgcactcgatactctgttgatgttt
ctttacactgcagagatgatagcaaaaatgcacatccgtgggatagtaaagggtgatacc
tcctacgtaaaggatcgctggtgcgtgtttgatggattcatggtattttgtctttgggtg
tcactggttttacaggtgtttgaaattgctgaactagttgaccagatgtcaccttggggc
atgttacggattccacgaccactcattatgattcgagcattccggatatattttcgtttt
gagctgccaagaactaggataacaaatatcttgaagcgttccggagagcaaatctggagc
gtttcaattttccttctgttctttcttctcctgtatggtatcctgggagtgcagatgttt
ggaacttttacttaccattgcgtgaccgatgacacgcagccaggaaatgtaacctggaat
aatttagctatcccagacacccactgttccagagagctagaagaaggttaccagtgccca
cctggatttaaatgcatggaccttgaacatctgggactaagcaggcaagagctgggctac
agtggctttaatgagataggcacaagcatatttactgtttatgaagctgcttctcaggaa
ggctgggtgttccttatgtaccgagcaattgacagttttcctcgatggcgttcgtatttc
tatttcatcaccttaattttcttcctggcctggcttgttaagaatgttttcattgcagtc
atcattgaaacgtttgcagaaatcagagtgcagttccagcagatgtgggggtccaggagc
agtactacgtcaactgctaccacccagatgtttcatgaagatgctgctggaggttggcag
cttgtggctgttgatgtgaataagccccagggcagagctcctgcttgtctacagaaaatg
atgaggtcatccgtgtttcatatgttcatactaagcatggtggctgtagatgtgattgtt
gctgctagtaactactacaaaggagaaaattttaagagacaatacgatgaattttactta
gctgaggttgcttttacagttctgtttgatttagaagctctcttgaagatctggtgtttg
ggtttcacaggatacatcagctcatctcttcacaagtttgagttgctgcttgtaattgga
accactcttcacatttatccagacctctatcactctcagtttacatattttcaggttctt
agagtagttcggctgataaagatttctcctgctttggaggattttgtgtataagatattt
ggaccaggaaaaaaacttgggagtttggtggtatttactgctagccttttaatcgtgatg
tcagccatcagtttacaaatgttttgcttcgtagaagaactggatagatttacaaccttt
ccccgggcattcatgtcaatgtttcagattctcacacaggagggatgggtagatgtcatg
gatcagacactgaatgctgtaggacatatgtgggcaccagtagttgctatttatttcata
ctatatcatctttttgctactctgattctactcagcttgtttgttgctgttattttggac
aacttggaacttgatgaagatctgaagaaacttaagcaactaaagcaaagtgaagcaaat
gcagatacaaaggagaagcttccactgcgtctacgcatctttgaaaaatttccaaacagg
ccacaaatggtgaaaatctccaagcttccctcagatttcacagttccaaaaataagggaa
agttttatgaagcagtttattgatcgccagcaacaagacaccagctgtttattgcgaaga
cttccttcagcttcttcttcctcatgtgaccactctaaaaaatcagcaattgaagaaaat
aaatatattgatcaaaagctccgtaaatctgttttcagcatcagagcaaggaaccttctg
gaaaaagagacagcaatcaataaaattctaagagcctgcactagacaacgcatgctgagt
ggatcgtttgaggggcagcctgcaaaggaaaggtcaatacttagtgtccagcatcatata
cgacaagaacgcaggtcactgagacatggttccaacagccagcgaatcagcagaggaaaa
tctcttgaaacattgactcaagatcactccaacacagtgagatacagaaatgcacagaga
gaagacagtgagataaagatgatccaagaaaaaaaagaacaagctgaaatgaaaaggaaa
gtgcaagaggaggagctgcgagagaatcatccatattttgataaaccacttttcatagtt
ggtcgtgagcacaaattcaggaatttctgccgagtggtggtacgagctcgctttaatgct
tctaaaacagatcctgttactggagctgtgaaaaataccaaataccatcagctttatgac
ttgctgggtttggttacttacctggactgggtcatgatcattgttactatatgctcctgc
atttccatgatgttcgaatccccctttagaagagttatgcatgctccaacactccagatt
gccgaatatgtttttgtaatattcatgagcattgagcttaatctgaagattatggcagat
ggcttgttttttacaccaacagctgtcattagggactttggaggagttatggacatattt
atatatcttgtgagtttgatattcctgtgctggatgcctcagaacgtccctgccaaatct
ggagctcagctcttaatggtacttcgctgcctccgaccgcttcgaatattcaaactggtc
cctcaaatgaggaaagttgtgcgagagctctttagtggctttaaggaaatatttttggtt
tctattcttttgctgacgttaatgcttgtttttgcaagctttggagtgcaactgtttgct
gggaaactggctaaatgcaatgatccacacatcatctccagggaagattgtcatggcatc
ttcagaattaatgtaagtgtttccaaaaatctcaatttgaagttaagacctggagagaaa
aagcctggattttgggtgccacgagtctgggcaaatcctcggaattttaattttgacaat
gtggggaacgcaatgctggcactattcgaagttctttcattaaaaggctgggtggaagtc
agggatgttattattcatcgtgttggaccgatccatggaatctacattcacgtttttgta
ttccttggctgtatgattggactaacccttttcgttggagtcgtcattgctaatttcaat
gaaaacaaggggacagctttactgactgtagatcagagacgatgggaagatctgaaaagc
agactgaagatagcacaacctcttcatctcccacctcgcccggataacgatggctttaga
gctaagatgtatgatataactcagcatccatttttcaagagaactattgctgtccttgtt
ctggcccagtctgtgttgttatcagtcaagtgggatgctgcagatccagtgactgtgcct
ttagcaacaatgtctgttgttttcaccttcatttttgtccttgaggtcaccatgaagatt
attgccatgtcaccttctggcttttggcaaagccgaagaaatcggtatgatctcttggtg
acatctcttggagttatatgggtgatacttcatttcgccttactgaatgcgtacacatac
atgatgggggcatgcgtaattgtcttcagatttttctcaatttgtgggaagcatgtgaca
ctaaaaatgctactcctgactgtggttgtcagcatgtacaagagtttcttcatcatagtg
ggaatgttcctactgcttctttgttatgcatttgctggagtggttttatttggtacagtg
aaatatggggagaacattaacagacatgcaaatttttcatcagctggcaaggctatcact
gtactcttcagaatagttactggagaagactggaacaaaattatgcatgactgcatggtt
cagcctccgttttgtacaccagataacagcacctactggaaaacagactgtggaaattat
gctggtgctcttatgtatttctgttcattttatgtgatcattgcatacatcatgttaaat
ttacttgttgctattattgtggagaatttctcattgttttattcaacggaagaagaccag
cttttaagttacaatgatcttaggcattttcaaattatatggaacatggttgatgacaaa
agagagggagtgatcccttctttccgagtgaaatttctgctgaggcttctgcggggcagg
ctggaggtggatctggacaaggacaagctgctgttcaagcacatgtgctatgaaatggaa
cggctccataatggtggtgatgtcactttccatgacgtactcagcatgctttcatataga
tctgttgatatcagaaaaagtcttcaactagaagagctgcttgctagggaacaactggaa
tacactatagaagaggaggtggccaaacagaccatacgcatgtggctgaagaagtgctta
aaacgaatcagagcaaaacagcagcagtcatgcagcattattcacagtctacgagagagt
caacagcaggagttgagccgatttctgaatcctcccagcattgagacaacacagccaagt
gaagatatgaatgctattaatcaggataacagtgcgcagccagagacaagtagccagcag
caactccttagcccaacgctttctgacagaggtggctatcgacaagactctgcagatgct
gggaaacctcagcggaaatttggacaatggcgtttgccatcagcccctaaaccaataagc
cattcagtatcttcagtcaacctccgctttggtgggcgttcaactatgaaatctgttgta
tgcaaaatgaatcccatgtctgatgctgcttcttgtggatcagaagtcaagaaatggtgg
acaagacaattaactgtggaaagtgatgagagtggagaggaccttcttgatatctga
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integrated database retrieval system
