Cuculus canorus (common cuckoo): 104065576
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Entry
104065576 CDS
T08597
Symbol
SH3TC2
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 domain and tetratricopeptide repeat-containing protein 2
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104065576 (SH3TC2)
Membrane trafficking [BR:
cuca04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
104065576 (SH3TC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
SH3_1
SH3_2
SH3_9
TPR_1
SNAP
TPR_2
TPR_8
Motif
Other DBs
NCBI-GeneID:
104065576
NCBI-ProteinID:
XP_053935864
LinkDB
All DBs
Position
14:9425009..9445251
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AA seq
1345 aa
AA seq
DB search
MCLHPGQPKGSCTAAESVPPGVHIWSLDSSDLRGEECEYYSPSLPELLPRGDRLEGTTAT
RWGKWWQKKTMASGEAGVVEPSKPPTKAAEYSLETSSVLLAVRECFPSEISLFFCVESRS
SQCLNSQLQEAAKKKLWALQSDDRSVCALFKELSARLVCMKAQENRFILTFKTLEEVWKF
STYLTLGYVGSCLEQLLFDQEYWLDCALMEDTKITVTVDEDRLASIYVGLLLQEGNFFSR
AAASVCQKQEGEEDLQLCRNELIYVKNIGKESKWEGVSLLTNQRGLVPVTAIEQVLHPFY
QWFLKNYAVSFGISQEISGMNSQPIVKGRCIATEDYRGAAGDELSFCKGDSIEVIGFFIP
GLTWFVGKSLSSGNIGFVPARYISLEACEPLGKSLVFLSEEEKSPLLRILCNGGEQRFTT
LLSDLARTDITSVYRLDGFEPTAVFLKVPSKAVLCDCKDIQLLQSWEEINGLATTSTSEL
SSPESESDPAMVKDIFLEKLNDFDDPKFFIDLNAGYMEDADVFDPILTFLNQDSYVTSFQ
SLYDHRFSFHNSTFGGFSDEDELVLYLETSRNRAKRTHAVWAHVRLCFLLGKLCIKKVKL
SQARVYFEEAMSILDRSFGDLPLLAALHVNLASIYLKQNMKSKFSPLLGKTVALLVCLPD
RSFSSANELEFMMYVLREAIAVGNTPLEARVCFLIVNLFLQLGKTDEVLPFTEHLQCLTT
TILSPDTSSVPLDATPVLSYLYDRKYLPNIALASARSFVPSNIKEAPTPIWRAGFILQNA
SKLLGSQLEKSNIPALACYYLKQALHFSCETRAASAQRTLCTILSRMYLQHGVLDGAVCY
AAMAVTLSRLMGEEEAFESSLSLGWMYLLNDQPGPAANIMWQLLRSLHGTESMTQAGAVH
NLLAIALKGDGQVQTAAKNYLQALHKARETGNKRNQAIALANLGQLSLSQGANQLSELYL
LQSTQQYAELQGSEDLEMELVWVLLWLAQAMVNRQKVEDAKLCYELALFFALKWHNVTSQ
LHVTESLCHFYHKVSLNLQACITYHEHWVSLAQQLQDREMEGDVLQTLSQLYQALGTSEA
LRHSLDCTKQSLRIFIDLEETVKAAEAWLQAGRLYYLMQEDELVEMYFQAAIQTALKSKN
FSLAMDLYEKAGDTFFNGSRNRDRAVEFLREGAVPLARKLKATKTELRLFNKLAELQIGL
RGYEKALEFAMLAARLSVRVGDQLQKLVAFHRLATVYYLLHMYEMAEECYLKALAMCPPL
LQCSGEALYYCKVYCHLGNLALHKLKDGQDAAVFFLLALAAAIELGNKDLQDLIRAKLWD
IPIAVXIPDCATYQPRWLSKGSHII
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgtgtctccatcctgggcagcccaagggatcctgcacagcagccgaatcagtccctcct
ggtgttcacatctggagtttggacagttctgatctcagaggtgaagagtgtgaatactac
tctcccagcctgcctgagctcctgccccgtggggaccgcctggagggcaccacagccaca
cgctggggaaaatggtggcagaagaagaccatggcatcaggtgaggctggggtggtggag
ccaagtaaaccccctaccaaggcagcagaatactcactagaaacctcttcagtgctgctg
gctgtcagggagtgctttccatcagagatttcactcttcttctgtgttgagagccgctct
tcccagtgcctcaattcccagctccaggaagcagccaaaaagaagttgtgggccctgcag
agtgatgacagaagtgtctgtgccctgttcaaggagctgtcagccaggctggtctgtatg
aaagcacaggagaatcgcttcatcctcaccttcaaaactctagaagaagtctggaagttt
tccacctatctgacgttagggtacgtgggcagctgcttggagcagcttctctttgaccag
gagtactggctagactgtgctctgatggaggacacaaagatcacagttactgtggatgaa
gatcgcttggccagcatatatgtcggtttgctgctccaggaaggtaactttttttccaga
gcagcagccagtgtttgtcagaagcaggagggagaggaagaccttcagctctgcaggaac
gagctgatctatgtgaagaatattggaaaagagtccaagtgggaaggggtgtccttactg
acaaatcaacgaggcctagtgcctgtgacagccatagaacaagtacttcacccgttttac
cagtggtttctgaagaattatgctgtgagttttggcatctcccaggagatcagcgggatg
aactctcagccaattgtcaaaggcaggtgcatagccacagaggactacagaggagcagca
ggggatgaactgagtttctgcaaaggagacagcatagaagtcatcggcttcttcattcca
ggacttacgtggtttgtgggcaaatccctcagcagtgggaacattggctttgttccagcc
cgatacataagtctggaggcttgtgaacctttgggaaagagcttggtgtttctgagtgaa
gaagaaaaatcacctctcctgcgcatcctctgtaatggtggtgagcagcgcttcaccacc
cttctcagtgacctggcacgcactgatatcacctctgtgtaccggctggatggttttgaa
cccacagccgtgttcctgaaagtgccatcaaaggctgttctctgtgactgtaaggatatc
caattgctccagtcctgggaggaaataaatggcttggctacgactagcacctctgagctg
tctagcccagagagtgaatcagaccctgccatggtgaaagatattttcctggagaagctg
aatgacttcgatgatcccaagttctttattgacctcaatgctggatacatggaagatgct
gatgtctttgacccgatattgaccttccttaaccaagatagttatgtgaccagttttcaa
agtctctatgatcatcgtttttcctttcacaattccacctttggtggtttctctgatgag
gatgagctggtcttgtaccttgagacgtccaggaacagggccaagaggactcatgcagtt
tgggctcatgtcaggctctgttttctcttgggtaagctctgcatcaaaaaggtcaagttg
tcccaggcccgagtctactttgaggaagccatgagcatcctggacaggagttttggggac
ctacccctgctggctgcgttgcatgtgaaccttgcctccatctacttgaaacagaacatg
aaaagcaagttctcccccttgctgggaaaaacagttgccttgcttgtttgcttgcctgat
cgctctttcagctctgcaaatgaattagaattcatgatgtacgtcctaagggaagccatt
gctgtgggcaacactcccttggaggcacgggtttgcttccttattgtcaacctgttccta
cagctgggcaaaacagatgaagttttgccctttactgagcatcttcagtgtctcacaacc
actatactcagcccagatactagttctgtgccattggatgccacccctgtcttgagctac
ctgtatgacaggaagtatttgccaaatattgcactggcctctgccaggtcatttgttccc
agtaacatcaaggaggcaccaacacccatttggagagctggcttcatcctccaaaatgct
tcaaaactcctgggaagccagctggagaagagcaacatcccagcactggcttgttactac
ctgaagcaggcattgcacttctcctgtgaaaccagagctgcgtctgcccagaggacgctc
tgtaccatcttatccaggatgtacctacagcatggtgtgttggacggggctgtttgttac
gcagccatggccgtaaccctcagcagactgatgggcgaggaggaagcttttgagtcttcc
ctctctttggggtggatgtatctcctgaacgaccagcctggcccagctgcaaacatcatg
tggcagctcttgcgctctctgcatggaacggagagcatgactcaggcaggagctgtgcac
aatctcctggccatcgccctcaaaggagacgggcaggtgcaaacagctgcaaagaactac
ctccaggctctgcacaaagccagggagactgggaacaagaggaaccaggctattgctctg
gctaacctagggcagctgagcctctcacagggggcgaaccagctgtctgagctctatctg
ctgcagtcaactcagcagtatgctgagctccagggcagtgaagatctggagatggagttg
gtgtgggtgctgctgtggctagcgcaggccatggtgaacaggcagaaagtggaagatgct
aaactctgttacgaattggcattgttttttgccctgaagtggcataacgtgacaagtcag
cttcatgtcactgagtctctctgccatttctaccacaaagtgtccctcaatctccaggcc
tgcattacctaccatgagcactgggtatctttggcacaacagctgcaggacagagagatg
gaaggcgatgtattacagactctcagccagctctaccaggctttgggcacatctgaggct
ttgagacactcactggactgcaccaaacagagtctaaggatcttcattgaccttgaggag
actgtaaaagcagcagaggcctggctgcaggcaggaaggctctactatcttatgcaggaa
gatgagctggtggaaatgtactttcaggcagccattcagactgctctgaaatccaagaac
ttctccttggccatggatctttatgaaaaagcaggtgataccttttttaatggcagccgg
aacagagatcgagcagtggagtttcttagggaaggtgctgtgcccttggccaggaaacta
aaggccactaagacagagctacggctgtttaataagctggcagagctgcagattgggctg
cggggctacgagaaggcactggagtttgccatgctggcagccaggctgagcgtcagggtc
ggagaccaattgcaaaagctggttgcattccaccgcctggctacagtctactatttgctg
catatgtacgagatggcagaagagtgctacctgaaggcacttgccatgtgccccccattg
ctgcagtgctctggagaggccttgtactactgcaaggtgtattgccaccttggcaacctg
gccctgcacaaactgaaggatggacaggatgcagcagtcttcttcctcctggccctcgcc
gcagcgattgagctgggaaacaaggacctgcaagacctcattcgtgccaagctgtgggac
atccccatagctgtgntgattccggactgtgccacgtaccagcccagatggctgagcaaa
ggcagccacatcatctga
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