Cuculus canorus (common cuckoo): 104066958
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Entry
104066958 CDS
T08597
Symbol
TRAF1
Name
(RefSeq) TNF receptor-associated factor 1 isoform X1
KO
K03172
TNF receptor-associated factor 1
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
104066958 (TRAF1)
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Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
zf-C3HC4
TRAF3_RING
zf-C3HC4_2
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
104066958
NCBI-ProteinID:
XP_053940218
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Position
19:2423069..2453546
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AA seq
558 aa
AA seq
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MAERTTRGPQDVPSSSPDENEFPFGYPTNICEDAPDQKYLCSNCNNVLKKALQTLCGHRY
CSACFSWIVRNNKNAICQKCKEEDPSIISEESLLAEERAFGDAAINKEISELKVHCVTLG
CSWSGIMRNFEEHQSLCEYALIPCHTGCGHMVMREKLADHLENGCVNNVTTCQKCQRSLS
SSEYQEHSCEGNLCKEQTYVQSETSSVEKQNCSIPSIIKGGCRFSEVGCSFRGSKEKIKE
HEKSSVGTHVLLLLQHIKQLKASLCSAAEAAEGFIPLAELNVNSGGKCISDVQIPAGLER
NGYLEADCFPGSSVSEDEPVLPQLVREKMISQLENKLHVFENIVAVLNKEVETSNLEIIA
FQRQSELDQNIIRGLELKIAELHRCLTQKDAGLSSLHNSLLFSEQASYDGVFLWKITDVG
RKLQDSVTGRTVSLHSPAFYTAKYGYKVCLRVYLNGDGTGKGTHVSLFFVIMKGDYDALL
PWPFRHKVTFMLLDQNNREHIIDAFRPDLTSASFQRPVNDMNVASGCPMFLPLSKLQSPK
YAYVKEDTLFLKCIIETN
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggctgagagaacaactagaggcccacaggatgtccccagctcttctcctgatgaaaat
gagtttccttttggatatcccactaacatttgtgaagatgcgcctgatcagaagtacctg
tgcagcaactgcaacaacgtcctgaagaaagccctccaaacgctctgtgggcataggtac
tgctccgcctgcttctcctggatcgtgcgaaacaataaaaatgcgatttgccagaaatgt
aaagaggaagatcccagcattataagtgaggaaagtctattggcagaagaaagggctttt
ggtgatgctgccattaataaagagatttctgagctcaaagtacattgtgtgacccttgga
tgcagttggtctgggatcatgagaaattttgaagaacatcagagcttatgtgaatatgct
ttaatcccttgtcacactggctgtggacacatggtgatgagagagaaactcgcggatcat
ttggaaaatggatgtgttaataacgtgacaacgtgtcagaagtgtcagaggagcttatcc
agtagtgagtaccaagaacattcatgtgaagggaatttatgtaaggaacaaacatatgtg
caatcagaaacatcgtccgtggagaagcagaactgctctataccctcaatcatcaaaggt
ggatgtcgtttttctgaggtcggctgttcatttaggggaagcaaagagaagataaaggag
catgaaaaatcttcagttgggactcacgtgctgcttctgctgcagcacataaagcagctg
aaggcaagcctgtgctctgctgccgaagctgcagaaggtttcatcccactggcagaactg
aatgtgaatagtggaggaaaatgcatctctgatgtacagatcccagcagggctggaacgc
aatgggtatctggaagcagactgttttcctgggtcttctgtttctgaagatgaacctgtt
ctgccacaacttgtgagggagaaaatgatttctcagctagaaaataagctgcacgtgttt
gagaatatcgtggcagtgctcaataaagaagtggagacctctaatttggaaatcatagcc
tttcagagacagagtgaactcgatcaaaatataatacgaggccttgaactgaagattgcg
gagttgcaccggtgcctgacgcagaaggatgccggcctgagcagtcttcataacagcctt
ctgttctctgagcaagcttcctacgatggggtctttctgtggaaaataacggatgttggc
aggaagttacaagactctgtgactggaagaacagtcagtttgcattcaccagctttctac
acggcaaagtatggctacaaggtctgtctgagagtttatctcaatggagatgggacggga
aaaggaacccacgtgtccctgttctttgttattatgaaaggagattacgatgctctgctc
ccgtggcctttcagacacaaggttacgtttatgttgcttgaccaaaataacagggaacac
attattgacgcgtttcgcccagatttgacttctgcttcgtttcagagaccagtgaacgat
atgaatgtcgcaagtggctgccccatgttcctccctttgtccaaactgcagtctcccaag
tacgcctatgtgaaggaagacacgcttttccttaaatgtattatagaaacaaattag
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