Cuculus canorus (common cuckoo): 104068348
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Entry
104068348 CDS
T08597
Symbol
CNGB1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
104068348 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cuca04040
]
104068348 (CNGB1)
Ion channels [BR:
cuca04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
104068348 (CNGB1)
BRITE hierarchy
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GFIT
Motif
Pfam:
cNMP_binding
DDHD
RPN2_C
THOC2_N
Rrn7_cyclin_N
Paf1
SpoIIP
Motif
Other DBs
NCBI-GeneID:
104068348
NCBI-ProteinID:
XP_053935154
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All DBs
Position
13:9491192..9519058
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AA seq
1189 aa
AA seq
DB search
MLGWIERVVPQPPVPHLTEETPTKLVQDPEPAKAPTGKASGSGDAGDHAQIEEIKKKVGF
AVPEDPGSVFESVGSSVLSWLSQGLEKVIPQPVAAPGTLQALGKSFETSIDVPDQTEVQI
LKDEEEDALEITPFDLEEEELDDCESKAGTEEWSGARVLNWLMQGFERMVPQPEVLKKPE
PERKEQKSEAMVGAAQSTQRAVEPVAAEGQPEPVTTLIPRSLAGDGSRVFAWLVQGLEKV
MPQPVTREKQDTQGVATASSSPVEEICIVPTEREETRLVLEEIDDDWINEATCKMLAWGR
EDELVASARPLPTIQEEPQEEENRLWLCALSTAKEGEEEEEQEEQEKQEQQEQEEQEQEQ
EEQEQEQKNEEEEMEESVGPLLQSPCLAVGEGVDEVYFAEEALRFEQLEEAEINDLEGAF
VQVEEETTEAAETDAEGSYPTVDIKDMDSRGDAVEDDGTHLPVPTAGAPNMLAVPGTPLA
SPRRKLLAPSDGLAEGLVSQSPTRTLLGWDEEQKESLPERIGSATSLNINARLQELVKLF
KERTEKVKEKLIDPDVTSDDESPTSSPTKAAPAAAPVPPPKGEPEEDKTAEDEHYCEMLC
CTFKCRPWLDHLKNYRFPSSIDPLTNLMYVLWLFFVVMAWNWNCWLIPVRWAFPYQTPAN
IHCWLLMDYLCDFIYLLDILVFQTRLQFVRGGDIITDKKAMKENYLRSQRFKMDLLCLLP
LDFLYFKVGVNPLLRFPRCLKYMAFFEFNNRLEAIMSKAYIYRVIRTTAYLLYSLHVNSC
LYYWASAYEGLGSTTWVYDGEGNSYIRCYYWAVKTLITIGGLPDPKTLFEIVFQLLNYFT
GVFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTIKYMNFYKIPKPVQNRVKTWYEYTWHS
QGMLDESELLVQLPDKMRLDIAIDVNYNIVSKVALFQGCDRQMIFDMLKRLRSVVYLPND
YVCKKGEIGREMYIIQAGQVQVLGGPDGKTVLVTLKAGSVFGEISLLAAGGGNRRTANVV
AHGFANLFILDKKDLNEILVHYPESQKLLRKKAKKMLKNNNKPKEEKGVPGDSLIIPPKP
DTPKLFQAALAAAGKMGGKGPLAQLRWRLKELKAMQAAQDSSFSPTPPKSPVHRRSPVTS
RKPHTHLGEEIFSKSSDSLVSFHVIPTAQEDEEILAAEISEKEEEKEEK
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgctgggctggattgagcgggtggttccccaacccccagtgccccatctgacggaggag
acacccacaaagctggtgcaggacccagagccagctaaggcaccaacgggaaaggccagt
ggctctggggatgctggtgaccatgcacaaatcgaggaaattaaaaagaaggtgggattt
gcagtccctgaggatccaggctctgtgtttgagagtgtggggagcagtgtgctctcctgg
ctctcccaggggctggagaaggtgattccccaaccagtcgcagccccagggacactacag
gcacttgggaagagctttgagacaagcatcgacgttcctgatcagacagaggtccagatc
ctcaaggatgaggaagaggatgctctggagataaccccctttgatctggaggaggaagaa
ctggatgactgcgagtctaaggccggcacagaggagtggtctggagcacgggtactcaac
tggctgatgcagggctttgagaggatggtgcctcagcctgaggtgctgaaaaagccagag
ccggaacgaaaagagcagaagagtgaagccatggtgggagcagcacagagcacccagaga
gcagtggagccggtagcagccgaggggcagccggaaccagtgaccaccctcatccctcgg
tccctggctggggatggcagcagagtgtttgcctggttggtccaggggctggagaaggtg
atgccacagccagtgacgagggagaagcaggacacacagggagtggccacagcaagctcg
agtcctgtggaggaaatttgtattgtccctacggaacgcgaggagaccagacttgtcctg
gaagagatcgatgatgactggattaatgaagccacatgcaagatgttggcctggggtcgt
gaagatgagctggtggcaagtgctcgtccccttcccaccatacaggaggaacctcaggaa
gaggaaaacaggttgtggttgtgcgccctgagcactgccaaggagggggaggaggaggag
gagcaggaggagcaggagaagcaggagcagcaggagcaggaggagcaggagcaggagcag
gaggagcaggagcaggagcagaaaaatgaagaggaggagatggaggagagcgtaggaccc
ttgctccagtcaccttgtctcgctgttggtgagggtgtggatgaagtctactttgcagaa
gaggccctcaggtttgagcagctggaagaagctgagataaatgacctcgaaggtgctttt
gtacaggtggaagaggagacaactgaagccgctgaaactgatgctgaaggtagttacccc
actgtggacatcaaggatatggacagtagaggtgatgctgtggaggatgatggtacccac
ctaccggtgcccactgctggcgctcccaatatgctggcggtgcctgggacgccactggca
tcccccaggcggaagctgctggccccatccgatggtctggccgagggactggtgagccag
tcacccacccggacactgctgggctgggacgaggagcagaaggaaagcctgcctgagcgc
ataggttcagccacaagcctcaacatcaatgcccggctccaagagctggtgaagctcttc
aaagagaggaccgagaaggtgaaggagaagctgatcgaccctgatgtcacctcagatgat
gagagccctacgtcatcacccaccaaagcagcgcctgcggcagcaccagtacctcccccc
aaaggggaaccagaggaggacaagacagcagaggatgagcactactgcgagatgctgtgc
tgcacgttcaagtgccggccttggctggaccacctgaaaaactaccggttccccagcagc
atcgacccgctcaccaacctgatgtacgtgctgtggctgttcttcgttgtcatggcctgg
aactggaactgctggctgatccctgtacgctgggctttcccctaccagacgccagcaaat
atccactgttggctgctcatggactatctctgcgacttcatctatcttctggacatcctc
gtctttcagacccggctgcagtttgtccgggggggagacataataactgataagaaggcc
atgaaagaaaactacctgcgatcacaacgctttaagatggatttgttatgcctccttccc
ctggatttcttatacttcaaagtcggtgttaacccactcctgcgttttcctcgctgtctg
aagtacatggccttcttcgagttcaacaaccgcctggaggctatcatgagcaaggcatac
atctacagagtgattcggaccactgcctatttactgtacagcttgcacgtgaactcctgc
ctctattactgggcatcagcctacgaaggactgggctctaccacctgggtctatgatggg
gaaggaaacagctacatccgctgctactactgggcagtcaaaaccctcataaccatcggg
ggcctgccagaccccaagacgctgtttgagatcgtctttcagctgctgaactacttcaca
ggcgtctttgctttctccgtcatgatagggcagatgagagatgtggtcggtgctgctact
gcagggcaaacttactatcggagctgcatggacagtaccattaaatacatgaacttctac
aaaatccccaaacctgttcagaaccgggtgaaaacgtggtacgagtatacgtggcattcg
caaggcatgttagatgaatcagagctgctggtgcagctgccagacaagatgaggctggac
attgccatcgacgtgaactacaacatcgtgagcaaagtggccctcttccagggctgcgac
aggcagatgatcttcgacatgctgaagcggctcagatcagtggtctacctgcctaatgac
tatgtgtgtaagaagggagaaatcggccgtgagatgtacattatccaggcgggacaagtg
caggtgctggggggacccgacggcaaaactgtgctggtgactctgaaagccggatccgtg
tttggagaaataagtttgctggcagcaggagggggaaatcgccgaacagccaatgttgta
gctcatggcttcgctaatctcttcattttggataagaaggacttgaatgagattttggtg
cattatccggagtctcagaagctgctgcgtaaaaaggccaagaaaatgctgaaaaacaac
aataaacccaaagaggagaaaggagtgcccggagactcgctgatcatcccccctaaacct
gacaccccaaagctcttccaggctgccctggctgccgcggggaagatgggaggcaaaggg
ccactggcacagctccggtggagactgaaggagctgaaggcgatgcaggcggcacaggat
tccagcttcagtccaacgccaccaaaatccccagtgcaccggagatcacctgtcacctcc
cgcaaaccacacacccacctgggagaggagatattttcaaaatcttctgatagtttagtc
agctttcatgtgattcctacagcacaagaagatgaagaaatccttgctgctgagatttcg
gagaaggaagaagagaaagaagagaaatga
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integrated database retrieval system
