Cheilinus undulatus (humphead wrasse): 121513696
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Entry
121513696 CDS
T07473
Name
(RefSeq) collagen alpha-6(VI) chain-like isoform X1
KO
K06238
collagen type VI alpha
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud04510
Focal adhesion
cud04512
ECM-receptor interaction
cud04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121513696
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121513696
09142 Cell motility
04820 Cytoskeleton in muscle cells
121513696
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cud04147
]
121513696
00536 Glycosaminoglycan binding proteins [BR:
cud00536
]
121513696
Exosome [BR:
cud04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121513696
Glycosaminoglycan binding proteins [BR:
cud00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121513696
Hyaluronan
Extracellular matrix or blood plasma proteins
121513696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
Kunitz_BPTI
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
121513696
NCBI-ProteinID:
XP_041649548
LinkDB
All DBs
Position
8:complement(52308027..52432588)
Genome browser
AA seq
2768 aa
AA seq
DB search
MEGRQGLLLSLILAACFYGNATQRTVCTQEAVADIVFMVDGSWSIGAENFEQIRRFLYTL
VNSFDIGPEHVRIGLVQYSTAPRTEFLLNTHQSKQDILQYISKLPYMGGGTQTGQGLDFM
LRNHFVQSAGSRAHQNVPQIAVVITDGKSQDDVEVHAQNLKKLGIVLYAIGIKDADEEQL
KEIANEPHSQHVYSVSDFAALQGISQSIVQTLCTTVEEVKRQLSQLSKECAQATMADIVF
LVDGSSSIGIANFDAMKQFLRSVVSGLDIGPDKVRVGLAQYSDEPYKEFLLKDHMNKNSL
LDEIDRFPYRTGGTETGKAMDFLRTQYFTEEAGSRASQRVPQIAVVITDGDSTDDVTLPA
QALRKHGVIVFGIGVGQANLKELQSIANRPPERFLSTIENYQALLTLTDGLLRTVCISAE
DQRQALAEKFADIFFLVDSGMAAAQFQQVRTLITRLVNQLNIGASAYRFGLAQYGQDVKV
EFLLNAHQTKRETQAAIRNFRQQRLQAGEKRRLGYALQYASTSFFTSAAGSRADKGFRQF
MVVISGKDSDDSMYQESRVIKSSGITVVAIGAGASKGEMIVVGTSPYVYESISQISAPEL
KAIFEREEVEAIPTLDCKNAKLADIVFIVDESGSITTPNFQLVRTFLHTIVSRLEVGVSR
VRVGIVTYNDRPQAQVHLNSFTDKDELLRFIKILPYNGGGTNTGAALNYTRESVFITAKG
SRKDKGVQQVAVVITDGESQDDVSKAAADLRRTGVTVYAVGVQGAVEAELKQIASYPTNK
HTFIVDSFAKMKSLEQVLQKTVCVNIIRQAVSVNKKKTGIKEGCFQTDEADIFFLIDHSG
SIYPSDFSDMKKFIIEFLHTFRIGPQHVRIGVAKYADAPNLEFDLTDYSDTKALENAVLA
IRQVGGGTETGRALDFMSPQFQRAETTRGHRVPEYLVVITDGKSTDDVKAPAAKLRAQGV
KVYAIGVKAADQDELREIAGDPKRMFFVNDFDALNPIKDDIVTDICSPDACRDQPGDIIF
LIDSSGSIKPDDYSKMKDFMKAVVGKSIIGENDVRVGVMQFSTRQQPEFRLNVHYTQDSL
IQAIDGMVQFGGGTHTGQAITEVSQYFEAAKGGRPSLRQRLVVITDGEAQDEVKSPAAAL
RARRVDIYAIGVVDANTTQLLEISGSPHRMYAERDFDALKDLESEVALELCEQKGDCKKT
EIADIIFLVDGSRSISSEDFKSMKKFMTSLVNQTNVGKDNVRFGAIMFGDDPHNVFTLKE
YQSKREVLRAIAALISLGENTYTSKALEFTLPYFNAEHGGRADLHVPQILLVITDGDATD
AVNLVPPSKALQDARINVFSVGVGKLNQTQLKIMAGNDQSRVFNVDNFKALEGLYKNISQ
ELCNFAVCEKRKADLVFLMDDSGSINPNDFTIMKNFITSVVNSFQVSQDLVHVGCAKFSD
SFENNFFLNEMFTTEAVTKKIMEIGQRGGGTRIGAALHRIKEHFESVHGSRRSEGVSQNL
VLITDGDSEDDVEDVAYSLRKMGIEVFVIGIGDVHDLELLQIAGTPERLFTVEDFGSLEN
IRGEVVKTICKSKPIEELKSCTIEIAMGFDISQPRRAPGELLFSGHTKLQNFLPEIAHYV
STVHGLCCVTSGPVNTKIAYRVVSREGSLLYDTSFEPHSVAIVDKVKALTRQPTYFDVTL
MESFKQKMSLSGAGVKVVVIFSDGLDADLMEMERQSELLRQSGVSALLVVALEGARDPAQ
LQMVEFGRGFGYSLPLSIGMPSVGSTILKQIDAVSDRECCNVLCKCSGHEGIRGLRGNSG
LKGVPGQKGHQGFPGDEGQAGERGFPGPSGPQGVQGCSGIRGLKGYRGIRGNRGENGDDG
LNGVNGEQGVTGPDGGRGDRGHSGNPGIPGIRGEPGLKGQRGLRGDPGEPGPNNNVPGPK
GDPGNPGVPGQPGPEGRPGESGVVGNPGPNGRRGPLGVKGPPGPKGDPGSQGNPGAPGPQ
GPRGVGGQPGPIGIPGLPGPQGASGRPGGPGPGGRRGPNGQKGQPGDPGDKGIPGPPGPI
GMPGQDGTDGYGTGGAKGAKGDAGFPGYPGLPGEDGLKGSKGYPGPKGNQGRPGNAGRPG
ESGILGEPGNPGHKGPRGPPGKMGTECELITYIRDNCACSIGRSECPVFPTELVFGLDMS
EDVTPAAFERQRSALLSLLEGVSIAESNCPTGARVAVVGYSSYTKYLIRFQDYHRKAELI
KSVKNIALERTSNRRHLGAAMRFVGHHVFKRVRAGKMMRKVAVFLSNGPTQDDGDIVTAM
MEYRGFNIIPAVISLRNAPKISRAMEVDDSKKAIFTVLGRDMNADLRRIKNCAICYDPCS
RSEECSFILEPERPQEANMDLVLVLDGSREMKADEYIGAQHLLGSVVEQLVVSPDPSRAG
NQARVALIQQGGSQVREEFGLQSYQSQELMRTHLTQRVQQLGGTSTLGRTLEYALRELLL
KAKNARRRRVLLTVVGTQTAYEDQAKLRYISQKAKCEGVALFVVTVGERYSRTQVEEMAG
LPVNQHLVHVSRMNAEEQGYCQRFFRVFTSILNRGINPYPPPSLKRTCDQLEEQVNGPIF
NSPGQAGFTEVDVVGDEEGGRFQAHTRGQTQQTGQIDIIDTLIRGDGQTATSSSTFNARC
LLGADTGIQCADYVQAWFFDTGIGACSPFWFGGCGGNANRFKTENECLQTCGIHNPDILP
KPELVSFTSKDACFQPQDQGGCQNYTMMWFFDTEQNECSRFWYGGCGGNENRFRTQRDCE
SLCLLKSR
NT seq
8307 nt
NT seq
+upstream
nt +downstream
nt
atggaggggaggcagggtctactcctcagcctcatcctggcagcgtgtttctatggcaac
gccactcagaggacagtctgcacccaagaggccgtagctgacatcgtcttcatggtggac
gggtcatggagcatcggcgccgagaacttcgagcagatccgtcggtttctgtacacgctg
gtcaacagcttcgacatcgggcctgagcacgtgcgcattgggctggtccagtacagcacc
gctccacgcacggagttcctgctcaacacccatcagagcaaacaggacatcctccagtac
atcagcaagttaccgtacatggggggcggaacccagacgggacaaggcctggacttcatg
ctgagaaaccactttgtgcagtcggcagggagccgggcgcatcagaacgtgcctcagatc
gctgttgtgatcaccgatggaaaatctcaagacgacgtggaagttcacgcccagaacttg
aagaaattgggaatcgttctgtacgccatcggtatcaaagacgcagatgaagagcagctg
aaggagattgccaatgagccgcatagtcagcacgtctacagcgtgtctgactttgcagct
ctgcaggggatttctcaaagcatcgtccagactctttgcacgactgtagaggaggtcaaa
cgacaactctcacagttgtctaaagaatgtgcccaagccaccatggctgacattgtcttc
ctggtcgacggctcctccagcatcggcatcgctaactttgacgcgatgaaacagttcctc
cgaagcgtggtctcaggcctggacatcggccctgacaaagtccgggtcggcttggcccag
tacagcgatgaaccgtacaaagagttcctgctgaaggaccacatgaacaagaactccctg
ctagatgagatcgacagattcccgtacaggacaggaggcacagaaaccggcaaggccatg
gacttcctccggacgcagtacttcaccgaagaggcgggaagtcgagctagccagcgggtg
cctcagatcgccgtggtgatcacagacggggactccacggatgatgtgactctgccggcg
caggcgctgaggaagcacggtgtcatcgtgtttggtattggggtgggacaggccaacctg
aaggagctgcagtccatcgctaaccggcctccagagcgtttcctgtcgaccatcgagaac
taccaggccctcctgactctcactgacggtctgctgcgaaccgtgtgcatctctgcagag
gaccagaggcaagctttggcagagaagtttgcagacatcttcttcctggtggacagcggc
atggcagcagctcagttccagcaggttcggaccctcataacccgcctggtcaatcagctg
aacatcggagcatccgcatatcgctttggactggctcagtatggccaagacgtcaaggtg
gagttcctcctcaacgcccaccagaccaaaagggagacccaggctgccattaggaatttt
cgccagcagaggctgcaagcgggtgaaaaacgccgactcggctatgctctgcagtacgcc
agcaccagcttcttcaccagcgcagccgggagccgggctgacaaaggcttcagacagttc
atggtggttattagtggaaaagactcggacgattccatgtatcaagagtcacgtgtgatc
aaatcctctggaattaccgtggtagcgatcggtgctggcgcttcaaagggggagatgatt
gtcgttggaacatcaccgtacgtttacgagtccatcagtcagatctcagcaccagagctg
aaggccatatttgaacgagaggaagtggaagccattcctactttggactgcaaaaatgcc
aaactggcggacatcgtgtttatcgtcgatgagtccggtagcatcacgaccccgaacttc
cagctggttcgtacattcctgcacaccatcgtgagccgcctggaggtcggcgtatcaaga
gtccgagtgggaatcgtgacgtataatgacaggccacaggcacaggtccacctcaactcc
ttcactgacaaggatgagctgctgagatttatcaaaatcctgccttacaacggaggaggc
accaacacgggagcagccctcaactacactagagagagtgtttttatcacagcgaaggga
agcaggaaggacaaaggtgtccagcaggtggcggtggtgatcacagacggtgaatcccag
gacgacgtcagcaaagcagcagctgacctgcgacgcacaggtgtcactgtttacgcagtt
ggagtccaaggtgctgttgaggccgagctgaagcagatagcgtcttatcccaccaacaag
cacacgtttatcgtggacagtttcgccaagatgaagtcgctggagcaggttctgcagaag
accgtgtgtgtcaacatcatccgacaagcggtgtccgtcaataagaaaaaaacaggcatc
aaagaaggctgctttcagacggatgaagcggacattttcttcctgatcgatcactcaggg
agcatttacccctctgacttcagtgacatgaagaagtttatcatcgagtttctgcacact
ttccgtatcgggccccaacacgtccgcatcggcgttgcaaaatacgctgatgcaccaaac
ttagagttcgatctgactgactactcagacaccaaggccttggagaacgctgtgttggcc
ataaggcaagtaggaggtggcacagagacagggagagcgctggatttcatgagcccacag
ttccagcgggcagagaccacccgtggtcacagagtccctgagtacctggtggtcatcacc
gatgggaagtccaccgatgatgtcaaggctcctgcagcgaagctgagggcacagggggtc
aaggtgtacgccatcggagtgaaagcagcagatcaggacgagctgagagagattgccgga
gaccccaagaggatgttctttgtcaacgactttgacgctctgaaccccatcaaggacgac
atcgtcacagacatctgctctccagacgcttgcagagaccaaccaggggacattattttc
ttgattgacagctctggtagcatcaaacctgacgactactccaaaatgaaagacttcatg
aaagccgttgttggaaagtccatcattggggagaatgatgtgcgtgttggcgtcatgcag
ttcagcaccagacagcagccagagttccgactcaacgtccactacactcaggacagtttg
attcaagccatcgatggcatggtgcagtttggcggtggtacacacacgggtcaagccatc
acagaagtgtcgcagtattttgaagcagccaaaggagggcgaccctccctgagacagagg
ctggtggtgatcacagacggagaggcgcaggatgaagtgaaaagccccgccgctgctctg
agggccagaagagtggatatctacgccattggagtggtggacgccaacaccacccagctc
ctggagatcagcgggtcaccgcacaggatgtacgctgagcgggactttgacgctctgaag
gacctggagagtgaagtggctctggagctgtgcgagcagaagggagattgtaagaagaca
gagatagccgacatcatctttctggtggatggctcccggagcatctcgtcagaagatttt
aaaagcatgaagaagtttatgacatccctggtgaaccagaccaatgttggcaaagacaac
gttcgctttggagccatcatgtttggcgacgacccccacaatgttttcaccctgaaggag
taccagtccaagcgagaggttctcagagccatagcggctctgatatccctaggtgaaaac
acatacaccagcaaggccttggaattcactctgccgtattttaatgctgaacacggcggc
cgtgctgatctccacgtgcctcagattctgctggtgatcacagatggagatgctacagat
gctgttaatctggtccctccctccaaggcactacaagacgccaggatcaacgtgttcagt
gttggtgtgggaaaactcaaccagacacaattgaagatcatggctgggaacgaccagtcc
agagtttttaatgtggataactttaaagccttggaaggtctctacaagaacatctctcag
gaactctgcaactttgcagtttgtgaaaaacgaaaggcagacctggtcttcctcatggat
gactccggcagcatcaaccccaacgacttcaccatcatgaagaatttcattacttcggta
gtaaacagcttccaagtcagccaggatttggtgcatgtgggatgtgccaagttcagtgac
agcttcgagaacaactttttcctgaatgagatgttcaccacagaggctgtgaccaagaag
atcatggagattgggcaacgtggaggaggcaccagaattggcgcggctctgcacagaatc
aaagagcactttgagtcggtacacggcagccgcagatctgaaggggtctcccagaatctg
gtgctaatcacagacggggattctgaggatgatgtagaggacgtagcatacagtctccga
aaaatggggatcgaggtgttcgtcatcggcatcggagacgttcacgacctagagctcctg
cagatcgccggcacaccggagaggctcttcaccgtggaggactttggcagcttagaaaac
atcaggggcgaagtcgttaagacaatctgcaaatcaaaacctatcgaagaactcaaaagc
tgcacaattgaaatcgccatggggtttgacatttcccaaccacgccgagctccaggtgag
ctgttgttcagtggtcacacaaagctgcagaacttcctgcctgagatcgcccactatgtt
tccaccgtgcatggcctgtgctgcgttacctccggtcctgtgaacaccaaaatcgcctac
cgtgtggtgagccgagagggaagcctcctgtacgacacgagctttgagccgcacagtgtc
gccatagtggacaaagtcaaagccttgacccggcagccaacgtactttgacgtgaccttg
atggaatcgttcaagcagaagatgagcttatctggagctggggtgaaggtcgtggtgatc
ttctctgacggactcgatgcagacttgatggaaatggagcgacaatcagaactgctccga
cagtctggtgtgagcgccctgctggtcgtagctctggagggagctcgggaccccgcccag
ctgcagatggtcgagttcggtcgaggattcggatacagtcttcccctgtccatcggcatg
ccgagcgtcggcagcaccatcctgaagcagatcgatgctgtgtctgacagggagtgctgc
aacgtcctgtgcaaatgttcggggcacgaaggcatccgaggtttacggggcaactcgggg
ttaaagggtgtgcccggacaaaaaggtcaccaaggattcccaggagatgagggccaggct
ggcgagcgaggtttcccaggaccgagtggacctcagggcgtccagggctgctccgggatc
cgaggactgaagggctacagagggatccgaggaaacaggggcgagaacggagacgacggg
ctgaacggagtcaacggagaacagggagtgacgggaccagacggaggtcgaggagacaga
ggacactcgggaaacccgggtatcccaggtatccgaggagagccggggctgaaaggacag
cgaggactgagaggagatccgggtgaaccaggacctaataacaacgtaccaggacctaaa
ggagaccccgggaacccaggtgtgccgggacaacctggaccagagggacggcccggtgag
agcggagtcgttggaaaccctggtcccaatgggaggagagggcctcttggtgtgaagggt
ccacctggaccaaaaggagacccaggcagccagggtaaccctggagctccaggtccacag
ggtccaagaggagtcggaggacagcctggacccataggaatccccggcctccctggacct
cagggtgcttcaggaagacctggaggacctggacctggagggcgccgtggacctaacgga
cagaagggtcagcctggagatccaggtgataaaggaattccaggacctccggggcccata
gggatgccgggtcaggatggtacagacggttatggaactggaggagccaaaggagcaaag
ggagacgctggttttcctggataccctggtctccctggcgaagacggcctgaaaggatct
aaaggatatccaggacctaaagggaaccaaggaagacccgggaatgcaggccgcccagga
gagtccggtatacttggagagcctggaaatccaggacacaagggtcccagaggtcctcca
ggaaaaatgggcacagagtgtgagctgattacctacatcagagacaactgtgcgtgctcc
attggtcgatcagagtgccccgtcttccccactgagctggtgtttggcctggacatgtct
gaggacgtgaccccagcagcctttgagcgtcagcgctccgccctcctctccctgctggag
ggcgtttccatcgccgagagtaactgtccgaccggcgctcgtgtggccgtggtgggatac
agcagttacaccaagtacctgatccgcttccaagactaccaccgcaaggcagagctgatc
aagtccgtaaagaacatcgccctggagaggacgtccaaccgccgccacctaggcgctgcc
atgcgctttgtgggtcatcatgtctttaaacgtgtcagagcggggaagatgatgaggaag
gtggccgtcttcctctctaatgggccaacacaggatgacggtgatatcgtgaccgccatg
atggaatacagaggcttcaacatcatcccagctgtcatctctctgaggaatgcgcctaaa
attagtcgggcgatggaggtcgatgactccaaaaaagccatcttcaccgtgctggggagg
gacatgaacgctgacctgcggaggatcaagaactgtgctatctgttacgacccttgcagc
cgttcagaggagtgctcgttcatcctggagccagagaggcctcaggaggccaatatggac
ctggttttggtcctggatggatccagggagatgaaggctgatgagtacatcggcgcccag
cacctcctggggtccgtggtggagcagctagtcgtgagccccgatcccagcagagccggt
aaccaggcccgggtggctttaatccagcagggtggcagccaggtcagggaggagtttggt
ctgcagagctaccagagccaagagctgatgaggactcacctgacccagagggtgcagcag
ctgggcgggacctcgacgctgggacggacgctggagtacgctctgagggagctgctcctg
aaggccaaaaacgcccgcaggaggagggtactgctgaccgtggtgggcacccagacggcc
tacgaggaccaggccaagctgcgctacatctcccagaaggccaagtgtgaaggagtggcg
ctgttcgtggtgacggtgggcgagcgctacagccggacgcaggtggaggagatggccggt
ctgcccgtgaaccagcacctggtccacgtgagcaggatgaacgccgaggagcagggctac
tgtcagcgcttcttcagagtctttacctccatcctcaacaggggaattaacccttatcct
ccgccttcacttaaacgaacatgtgaccagctggaagaacaagtcaacgggccgatattc
aacagtccgggtcaggcggggttcacagaggtggacgtggtgggggacgaggaagggggg
cgcttccaggcgcacacgagaggacagactcagcagaccggccagatcgacatcatcgat
acgctgatcagaggagacggccagacagcgacgtcttcgtctacatttaacgcccggtgt
ctgctgggggctgatactgggatccagtgtgccgactatgtccaagcgtggttctttgac
accggcatcggtgcatgctccccattctggtttggcggttgcggcggcaacgccaaccgc
tttaaaacggaaaatgaatgtctccagacatgtggcatccataatccagacatcctgccc
aaaccggagctggtcagcttcacctccaaagacgcctgcttccagcctcaggaccagggc
ggctgtcagaactacacaatgatgtggttctttgacaccgagcagaacgagtgctctcgc
ttctggtacggtggctgcggcggcaacgagaaccgtttcaggacgcagcgggattgtgag
agcctgtgtctgctgaagagccggtga
DBGET
integrated database retrieval system
