Cheilinus undulatus (humphead wrasse): 121514724
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Entry
121514724 CDS
T07473
Symbol
cnot1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121514724 (cnot1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cud03019
]
121514724 (cnot1)
Messenger RNA biogenesis [BR:
cud03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121514724 (cnot1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
121514724 (cnot1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
121514724
NCBI-ProteinID:
XP_041650911
LinkDB
All DBs
Position
9:43496240..43527571
Genome browser
AA seq
2392 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECVSLISKPNFISTLCYAIDNPLHYQKSLKPSAHLFTQLSKVLK
LSKVQEVIFGLALLNSSNTDLRGFAAQFIKQKLPDLLRSYVDADLGGNQEGGFQDIAIEV
LHLLLSHLLFGQKGASGVGQEQIDAFLKTLCRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGELAKTMMESSLAEFMQEVGYGFCANLDECRNIIIQYGVREVTASQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKNDGSQAHTWNVEVLIDVVKEVNPNLNFKEVTYE
LDHPGFVIRDSKGLHIVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLMSPEVFC
FADYPCHTVAIDILKAPPEDDNREIATWKSLDLVESLLRLSEVGQYEQVKQLFGFPIKHC
PDMLVLALLQISTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
SMAEWYMRGEQYDQAKLSRILDVAQDLKSLSMLLNGTPFAFVIDLAALASRREYLKLDKW
LNDKIREHGVSPESDFHLEPFIQACVTFLKRRCPSIMGGLAPDKDQPKSAQLPPETLATM
LVCLQSHAGSVSQEVSETILTMVANCSNVMNKARQPPPGVMPKGRAPSTSSLDAISPVQM
DPLSGMGSLNLGGTATSHTQSMQGFPTSLSSAFSNPQSPAKAFPPLSNPNPSTPFGGIGS
LSSQLPGMDSGPLGSGIGSGLGIPPVNTDPFGTRKMSTPGLNPPTFQQTDLSQVWPEANQ
HFSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEE
YRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPYGSKMYYFGIAAL
DRFKNRLKDYPQYCQHLASIAHFLQFPHHLQECVQYIEYGQQSRDPPVKMQGSITTPGSL
ALAHVQAQSQPGGPKAPQPGQPSTLVTTTTTTTTVAKTTTITRPTPSSFKKDVPPSINTT
NIDTLLVATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQY
LVMKRVSIEPNFHSLYSNFLDTLKNPEFVKMVLNETYRNIKVLLTSDKAAANFSDRSLLK
NLGHWLGMITLAKNKPILYTDLEVKSLLLEAYVKGQQELLYVVPFVAKVLESSLRSMVFR
PQNPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLSLDINDLKPGNLLKDKDKLKSLE
EQLSAPKKETKPPEEMLPVSTTGDFVPFAAPPSTPAATTTTCTTTGPPTPQFSYHDINVY
ALAGLAPHININVNIPLLQAHPQLKQCVRQSVERAVQELVHPVVDRSIKIAMTTCEQIIR
KDFALDSEESRMRVAAHHMMRNLTAGMAMITCREPLLMSIATNLKNSFAAALRAPTPQQR
EMMEEAAARIAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVV
LTYQAERMPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPSNDLSQPTGFLAQPMKQQAWA
TDDVAQIYDKCMADLEQHLHAIPPALAMNPLTQALRSLLEAVVLARNSRDGIAALGLLQK
AVEGLLDATSGADADLLLRYRECHLLVLKALQDGRAYGPQWCNKQITRCLIECRDEYKYN
VEAVELLIRNHLVNMQQYDLHLAQSMENGLHYMAVAFAMQLVKLLLVDERSVSHVTEADL
FHTIETLMRTCAHSRANAPEGLPQLMDVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDD
PPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTE
MCVEISYRAQAEQQHNPAASAAIIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLN
KVLGIVVGVLIQDHDVRQTEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFH
ILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVEL
NKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPD
PFTPNLKVDMLSEINIAPRILTNFTGVMPSQFKKDLDSYLKTRSPVTFLSELRSNLQVSN
EPGNRYNIQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRY
LFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLI
TFIELIKNPAFKFWSHDFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7179 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggctttgtctcaaatcagctatctggtggacaattta
acaaagaaaaattaccgagccagccagcaagaaatacagcatattgtaaatcgtcacggt
cctgaggcagacaggcatctactacgctgtctcttctcccatgtggatttcagtggcgat
ggtaaaagcagtggcaaggactttcaccagacacagtttctgatccaggagtgtgtgtcg
ctgatatcaaagccaaactttatctctactctttgctacgctattgacaaccctctgcat
tatcagaagagtttgaagccatcggcccatcttttcactcaactgagtaaagttctaaaa
cttagcaaggtccaagaggtgatttttggccttgccttgctcaattccagtaacacagac
cttcggggttttgcggcacagttcatcaaacagaaactcccagacctcctgcggtcatac
gttgacgcagatcttggaggaaaccaagaaggtggcttccaagacattgccatagaggtc
ttgcacctactgctctcccatctactgtttggccagaagggagccagtggggtcggccaa
gagcagattgacgccttcctcaagacactttgccgagatttcccccaggagcgctgccct
gtggtgctcgcaccactgctgtaccctgaaaaacgggacattctcatggacaggattctg
ccagactcgggggagctagctaagaccatgatggagagttctcttgcagaattcatgcaa
gaagttggctatggcttttgtgcaaatctggatgagtgcaggaacataatcatccagtat
ggggtaagggaggtgacagccagccaggtagccagggttcttggcatgatggcacgtaca
cactctggcctgactgatggtattccactacagtccatctctgctccaggaagtggtatc
tggagcgatggtaaggataagaacgatggttcacaggcacacacctggaatgttgaggtt
ctcatcgacgttgtgaaagaagtgaatcccaaccttaactttaaagaggtgacctacgaa
cttgaccatccaggctttgtaatccgggacagtaaaggcctgcacatagtggtgtacggc
attcagaggggcttaggcatggaggttttccctgtcgatctcatctatcggccatggaag
catgccgaaggacagttgtccttcattcagcactccctgatgagtccagaagtgttctgc
tttgctgactacccttgccacactgtggctattgacatccttaaggccccaccagaggat
gacaatagggagattgcaacctggaaaagtctggacctggtggagagcctgctcaggctg
tctgaagtgggtcagtatgagcaggtgaagcagctttttggtttcccaatcaagcactgt
ccagacatgttggtgctagcgttgctgcagatctccacctcctggcacacactgcgccat
gaactcatctcaaccctaatgcccatctttctgggcaaccatcccaactcggccatcatt
ctgcactatgcctggcatggacagggacagtctccttccatccgtcagttaattatgcat
tcaatggctgagtggtacatgagaggggagcagtatgaccaggcaaaactttctcgcatc
ctggatgtggcccaggatctgaagtctctatcgatgctgctgaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgccgtgaatacctcaaacttgacaaatgg
ctgaatgacaaaatcagagagcatggagtaagtcctgaatctgattttcatttggaacct
tttatccaggcgtgtgtgacattcctgaagaggcgctgcccatctattatggggggtctg
gccccagacaaggaccagcctaaaagtgcccagcttcctccagagaccttagccaccatg
ctagtctgcctgcagtcccatgctgggagtgtatcccaggaggtgtcggagacgatcttg
accatggttgctaactgcagcaatgtaatgaataaagcccggcagccaccacctggggta
atgccaaaaggtcgtgcccccagcaccagcagcctagatgccatctctcctgtacagatg
gaccctctttcaggcatgggttctttaaacctagggggtactgccacttcccacacccaa
agcatgcagggtttcccaacctctctaagttcagcttttagtaatccccagtccccagca
aaggctttcccaccactttccaaccctaaccccagcacaccatttgggggcataggcagc
ctgtcctcgcagcttcctggtatggactctggtcccttgggctcaggcatcggttctggt
ctggggataccaccagtgaatactgatccttttggcaccaggaagatgagcacaccgggc
ctgaacccacctacctttcagcagactgacctttctcaggtgtggccagaggcaaaccag
cactttagtaaggagatagatgatgaagcaaacagttattttcagcgcatctacaaccac
ccacctcacccaaccatgtctgtggatgaagtactggagatgctgcagaggttcaaggat
tcaaccatcaagcgggagcgagaggtgttcaactgcatgctgcgcaacttatttgaggag
tacagattctttccccagtacccagacaaggagctgcacatcactgcctgcctttttggt
ggcattatagagaagggtcttgtgacctacatggcactgggtttggccctccgatatgtt
cttgaagccttaagaaaaccctatgggtccaaaatgtattattttggaatcgccgccctt
gataggtttaaaaacagactaaaggactaccctcagtattgccaacatctggcttcaatt
gctcacttcttgcaattcccccaccatttacaagagtgtgtgcagtatatcgagtatggc
caacagtcacgggaccctccggtgaagatgcaaggctccatcaccacccctggcagtctg
gcactggcacatgtacaagctcagtcacaacctggtggacctaaagccccgcagccaggt
caacccagcaccctcgtcaccaccaccacaactacaaccacagtggcaaagaccaccacc
atcacaagaccaacacccagcagcttcaagaaggatgtacctccctccatcaacacaacc
aacatcgacaccctgctggtagccactgaccaaacagaaaggattgtagagcctccagag
aatgtccaggagaagattgcctttatcttcaacaacctctctcagtctaacatgacacag
aaggttgaggagttgaaagagacagtgaaggaagaatttatgccatgggtgtctcagtac
cttgtcatgaagcgtgtcagcattgagccgaacttccacagtctctactctaactttctg
gatactctgaagaaccctgaatttgtcaaaatggtcctcaatgagacatacagaaatatc
aaggttctgttgacctctgacaaggcagctgccaatttctctgatcgctccctgctgaag
aacctgggccactggttggggatgataacactggccaaaaacaagcccattctttataca
gatcttgaagtgaaatctctacttttggaagcatatgtgaaaggtcagcaggagctgctg
tatgtagttccctttgttgctaaggttttggaatccagtctccgcagcatggttttcagg
ccccagaacccctggaccatggccatcatgaatgttcttgctgaacttcatcaggagcat
gaccttaagctgaacctaaagtttgagattgaagttctttgtaagaacttgtctctggac
atcaatgacctcaagccaggaaacttgctcaaagacaaggacaagctgaagagtctggaa
gagcagttgtctgcaccaaagaaggagacgaagcctccagaagagatgctgccagtttct
accacaggagactttgttccatttgcagctcctccatcaacccctgctgccaccaccaca
acttgcacaaccacggggccccccaccccacagttcagctaccacgacatcaatgtgtat
gccctggcaggtctcgctccacacatcaatataaatgtcaatatccctctactgcaggcc
caccctcagttaaagcagtgtgtacggcagtcagtagagcgagctgtccaggaactggtg
caccctgtggttgatcgctctatcaaaattgctatgacaacctgtgagcagatcatcagg
aaggactttgctctggactctgaggagtcccgcatgcgtgtggctgcccaccatatgatg
aggaacctgactgcaggcatggccatgatcacctgccgagagcccctgctgatgagcatt
gccaccaacctcaaaaacagctttgctgctgcacttagggcaccaacgccccagcagagg
gaaatgatggaagaggctgcagccaggattgcccaagacaactgtgaactggcgtgctgc
tttattcagaaaacagcagtggagaaggctggtcctgaaatggacaagagacttgccacg
gagtttgagctgaggaagcatgcacgccaagagggacggcgttattgtgatcctgttgtt
ctgacttaccaggcagagcgtatgcctgaacagatcaggctcaaggtgggaggagtggac
cccaaacagctggctgtatatgaggagtttgcaaggaatgttccaggtttcttacccagc
aatgatctctctcagcccactggcttcttggctcagcccatgaagcaacaggcctgggcc
acagatgacgtagctcagatctatgataagtgcatggcagatttagagcagcatcttcat
gccatccctccagcacttgccatgaaccctctgactcaggctctgcgcagtctgctggaa
gctgtggtcttggctagaaactccagagatggcattgctgctcttggccttctgcagaag
gctgttgaaggtcttcttgatgctactagtggggctgatgccgacttgctgcttcgctat
agggagtgccacctgctggtgcttaaagctctacaggatggacgtgcctatggaccacag
tggtgcaataagcagatcaccaggtgtctgatcgaatgccgtgatgagtacaaatacaac
gtagaggcagttgagcttctgattaggaaccaccttgtgaatatgcagcagtatgacctg
cacctggcacagtcgatggaaaatggactgcactacatggcagttgcttttgccatgcag
ttggtgaagctgctgctggtggatgaacgaagtgtgagccatgttacagaagctgacctc
ttccacacaattgagaccttaatgagaacctgtgcacactccagagcaaacgcacctgag
gggcttccccagctgatggatgttgttcgctccaactatgaggccatgattgaccgggcc
cacggtggacctaacttcatgatgcactctgggatttcccaggcttcagagtatgatgat
cctccaggcctgagggagaaagcagagtacctcctcagagagtgggtcaacctgtatcac
tcagctgcagctggcagggacagcactaaagctttctcagcatttgttggccagatgcac
cagcagggaatcctgaagacggatgacctgatcacaaggttcttccggctgtgcacagag
atgtgtgtggagatcagctatcgggcacaagctgagcagcagcacaacccagcagccagt
gcagcaatcatcagagccaagtgttaccacaacctggatgcctttgtaaggctgatagct
ctgctagtcaaacactctggagaggccacaaacacggtgactaaaatcaacctcctcaac
aaggtgctgggaatcgtagttggggtgttgatccaggaccatgacgtccgtcagacagaa
ttccaacagctaccataccatcgcattttcatcatgctgctgctggagctcaacgctcca
gaacatgtcctggagaccatcaacttccagactcttacagctttctgcaatactttccac
attctgagacccaccaaagcacccggttttgtgtacgcctggctggagctcatctcccat
cgaatcttcattgccaggatgctagcacacacaccccagcagaagggttggcctatgtat
gcacagctgctgattgatctcttcaagtacctggccccgttcttgaggaatgtagagctc
aacaaacctatgcaaatcctctacaagggcacactgcgagtgctcctggtcctgctgcat
gacttcccagaattcctgtgcgactatcattatggtttctgtgatgttatcccacccaac
tgcatccagctccgcaacctcatcctcagtgccttcccacgcaacatgaggctcccagac
cccttcacacccaatctaaaggtggacatgctgagtgagatcaacattgctccccgtatt
ctcacaaacttcacaggcgtcatgccttcgcagttcaagaaagacctggactcgtatctg
aagacccgttcaccagtcactttcttgtctgaactgcgcagcaacctgcaggtgtctaat
gagccaggaaaccgttacaacatccagctgatcaatgctctagtgttgtatgtaggcaca
caggcgatcgctcacatccacaacaagggcagcactccctccatgagcaccatcacccac
tctgctcacatggacatcttccagaacctggctgtggacctggacactgaaggtcgttac
ctcttcctgaacgcgattgccaatcagctgcgctaccccaacagtcacactcactacttc
agctgcaccatgctctatctgttcgctgaggccaacactgaggccatccaggagcagatc
accagggttctgctggagaggctgattgtgaacaggcctcacccatggggtctcctcatc
acctttatcgagctgattaaaaatcctgccttcaagttctggagtcatgactttgtgcac
tgtgcccctgagattgaaaagctgttccagtcagtggctcagtgctgcatgggacagaag
caggcccagcaggtgatggagggcaccggtgccagctag
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integrated database retrieval system
