Cheilinus undulatus (humphead wrasse): 121519414
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Entry
121519414 CDS
T07473
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121519414 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cud03041
]
121519414 (prpf8)
Spliceosome [BR:
cud03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
121519414 (prpf8)
Complex C
U5 SnRNP specific factors
121519414 (prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
121519414
NCBI-ProteinID:
XP_041658210
LinkDB
All DBs
Position
2:complement(28241752..28259896)
Genome browser
AA seq
2338 aa
AA seq
DB search
MTATFPYRGVPPGMPPGVPPPAPVPDFMTEEKLQEKARKWQHLQAKRYSEKRKFGFVDAQ
KEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVP
VLYHITGAISFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLD
YADNILDVEPLEAIQMELDPEEDSSCVEWFYEHQPLKDTTKFVNGTTYRRWQFTLPMMST
LYRLANQLLTDLVDFNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFN
DINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLIN
PISHRHSVKSQEPLPDDDEEFELPEYVEPFLKETPLYTDNTANGIALLWAPRPFNLRSGR
TRRAIDIPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFK
ATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKK
SRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYK
LMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLA
RQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSESW
RCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLG
RLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTK
LLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIE
FMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQ
GINNLQDVWETAEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVI
NYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDT
ATESAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRD
ARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRIL
PKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFT
KIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFY
TPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWES
EFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR
VRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPT
WEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDL
TGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPR
KSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIE
RYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSGYGNWFPGSKPLIQQAMAKIMKAN
PALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGN
LTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQ
PKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLF
NLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWI
KVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQS
QLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDI
KETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGTHQTV
HLPNQLPGHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCS
FTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPGQV
SWNYNFMGVRHDPNMKYDLQLANPKEFYHEVHRPSHFLNFASLQEGEIYNADREDMYA
NT seq
7017 nt
NT seq
+upstream
nt +downstream
nt
atgacggctaccttcccctacagaggggtccctcctgggatgccaccaggcgtaccccct
cctgcaccagtcccagattttatgactgaggaaaaactgcaagaaaaagcaagaaaatgg
cagcacttacaagcaaagcgctactcagagaaaaggaagtttggctttgtggacgctcag
aaggaagacatgccacctgagcatgttcgcaaaatcatcagagaccatggagacatgacc
aacagaaagtttcgccatgacaagagggtgtatctcggtgccctgaagtacatgccccat
gctgtgctgaagctgctagaaaacatgccaatgccttgggagcagatcagagatgttcca
gtcctctaccacatcactggagctatttcctttgtgaatgaaatcccctgggtgatagag
ccagtctatattgctcagtggggcaccatgtggatcatgatgcgtcgtgagaagcgtgat
cgtcgacacttcaagaggatgcgttttccaccctttgatgatgaggagccaccgctggac
tatgctgacaacatccttgacgtggaacctctggaggctattcagatggagctggaccct
gaggaggattcatcttgcgtagagtggttttatgagcatcagcctctcaaagacacaacc
aagtttgtgaatggcaccacataccgtcgttggcagttcacactgcctatgatgtccacg
ttgtatcggctggccaatcagctgttgactgacctggtggatttcaactacttttacctg
tttgacctgaaggccttcttcacatcaaaggccttgaatatggccataccaggggggccc
aagtttgagccgcttgtcagggacatcaacctccaagatgaagactggaatgagttcaat
gacatcaacaaaatcatcattcgacagcctatcaggactgagtacaaaattgccttcccc
tacctgtacaacaacctgccacatcatgttcatctcacctggtatcacacaccaaacgtg
gtgttcatcaagactgaggatccagatcttccagcgttctactttgaccctctgatcaac
cccatttcacacagacactcagtcaagagtcaggagcctcttcctgatgatgatgaagag
tttgagctgcctgagtacgtggagcctttcctcaaagagaccccactctacacagacaac
acagctaacggcattgctttgctgtgggcgccaagacccttcaacctccgatctggacgc
acaagacgtgccattgacatccccctgatcaagaattggtaccgtgagcactgccctgct
ggacagccagtgaaagttcgtgtgtcataccagaaactgctcaagtactacgtgctcaac
gctctcaaacacagaccaccaaaggcccagaagaagaggtatctgttccgttcattcaag
gccaccaagttcttccagtccacaaagctagactgggtggaggtgggtctgcaggtgtgc
agacagggctacaacatgctcaatctgcttatccaccgtaagaacctcaactacctgcat
ttggactacaacttcaacctgaagcctgtcaagacgctgaccacaaaggaacgaaagaag
tccagatttggcaatgcattccacctgtgcagagaggtgctgcgtctgagcaagctggtg
gtggacagccatgttcagtacagactgggaaatgttgatgccttccagttggctgatggg
ttgcagtacatcttcgctcatgtgggtcagttgacaggcatgtatcgctacaaatacaag
ttgatgagacaaatccgaatgtgcaaagatctcaagcatctcatctactaccgctttaac
actggccctgttggcaagggtccaggttgtggcttctgggctccaggctggagagtgtgg
ctgttcttcatgagaggaatcactccactgttggagaggtggctgggaaatctgctggcc
aggcagtttgaaggccgtcattcaaagggcgtagccaagacagtgaccaaacagcgagtg
gagtctcactttgacctggagctgcgtgctgctgtgatgcacgacatcttggacatgatg
cctgagggcatcaaacagaacaaggccaggacaatcctacagcacctcagtgagtcctgg
aggtgctggaaggccaacatcccctggaaggtgcctggccttcccacgcccattgagaac
atgatcctgcgctatgtgaaggccaaagctgactggtggacaaacacggcccactacaac
cgtgagcgaatacgtcgtggagccactgtggataagacggtgtgcaagaagaacctgggg
agattgactcgtctgtatctgaaggctgagcaggagagacaacacaactacctgaaggat
ggtccctacatcacagctgaagaggcagtcgccatttacaccaccactgttcactggctg
gagagtcggagattctcacccatcccgttccctccactgtcctacaaacacgacaccaaa
ctgctcattctggccctggagaggctcaaggaggcatacagtgtgaagtctcgtctgaac
cagagtcagagggaggagctagggctgattgagcaggcatacgacaatcctcacgaggcc
ttgtccaggattaaacgtcaccttctcactcagagagccttcaaagaggtgggcattgag
ttcatggacttgtacagtcatctggtgcctgtatatgatgtggagcccctggagaagatt
actgatgcctaccttgaccagtacctgtggtacgaagcagacaaacgacgcttgttccca
ccctggattaaacctgctgacactgaacctccaccactgctggtctacaaatggtgtcaa
ggcataaacaacctgcaggatgtgtgggagactgctgagggggagtgtaacgtcatgctg
gaatctcgatatgaaaagatgtacgagaagatcgatctgacactgcttaacaggctgctg
cgacttattgttgatcacaacatagctgattacatgactgccaagaacaacgtggtcatc
aactacaaggatatgaaccacaccaactcctacggcatcatcagagggctgcagtttgcc
tcattcattgttcagtactacggcctggtgatggacctgctggtgctcggcctgcatcgt
gccagtgaaatggccggtcctcctcagatgcccaacgacttcctgagtttccaggacacc
gccacagagagcgcccacccgatccgactctactgccgctacattgaccgcatccacatc
ttctttaggttttctgctgatgaagccagagatctgattcagagatatctcacagagcac
ccagaccccaacaatgagaacatcgtgggctataacaacaagaagtgctggccccgtgac
gcccgcatgagactgatgaagcatgatgtcaaccttggacgtgctgtgttctgggacatt
aagaaccgcctgcccagatcagtgaccacagttcagtgggagaacagctttgtgtcagtc
tacagcaaagacaaccctaatctgctgttcaacatgtgcggctttgagtgccgcatcctg
cctaaatgtcgcaccagctatgaagagttcacgcacaaggacggagtgtggaacctgcag
aatgaggtaaccaaagagaggacagcccagtgcttcctgcgtgttgacgatgaatccatg
cagcgcttccacaacagagtgcggcagatcctgatggcttctggatccaccacgttcact
aagattgtgaacaaatggaacacagctctgattggactgatgacatacttccgtgaggcc
gtggtgaacacacaggagctcttggacctgctggttaagtgtgagaacaagatccagacc
cgtataaagattggcttgaactccaaaatgccaagccgcttccctccggtggtcttctac
actcccaaagagttaggaggccttggcatgttgtccatgggccatgtgctcatcccacag
tcagacctgcggtggtccaagcagacagatgtgggtatcacccacttcaggtctggaatg
agccacgaagaagaccaactgattcctaatctgtatcgctacattcaaccgtgggagagc
gagttcatcgattctcagagagtttgggcagagtatgctctcaaaagacaggaagccatc
gcccagaacaggcgtctgacgcttgaagatttggaggactcgtgggacagaggaatcccc
cgtatcaacactctgttccagaaggacaggcacacactggcctatgacaaaggctggaga
gtcaggacagatttcaagcagtatcaggtgttgaagcagaatcccttctggtggacccac
cagaggcatgatggtaaactgtggaacctgaacaactaccgcacagacatgatccaggct
ttgggtggcgtggagggcatccttgaacacactctcttcaaaggcacttacttcccaact
tgggagggtctcttctgggaaaaggccagtggttttgaggagtccatgaaatggaagaaa
ctgacaaatgcccagaggtctggtctgaatcaaatccccaatcgtcgcttcactctttgg
tggtcgcccaccatcaacagggcaaacgtgtacgtgggtttccaggtgcagcttgacctc
actggaatcttcatgcatggcaagatccccacactgaagatctctctcattcagatcttc
agagctcacttgtggcagaagattcatgagagcattgtcatggatctctgtcaggtgttt
gatcaggagctggatgccctagagattgagacagtgcagaaggaaaccatccaccccagg
aagtcttacaagatgaactcatcctgtgcagacatcctcctctttgcatcgtacaagtgg
aacgtctcacgaccatctctacttgctgactcaaaggatgtgatggacagcaccaccacg
caaaagtactggatcgacattcagctccgctggggtgactatgattctcatgacatcgag
cgctacgctagagccaagttcctggactacaccactgacaacatgagtatctacccatct
cccactggggtgctcattgctatcgacctggcctacaacctccatagtggctatggtaac
tggttccctggaagcaagcccctgatccagcaggccatggccaaaatcatgaaggccaac
cccgccctgtatgtgctcagggagcgcattcgcaaaggtctccagctgtactcctctgag
cccactgagccgtacctgtcctcgcagaactatggtgaactcttctccaaccagatcatc
tggtttgtcgatgacaccaatgtgtaccgagtcaccatccacaagacctttgagggtaac
ttgaccacgaagcccatcaatggagcaatcttcatcttcaaccccaggaccggtcagctc
ttcctcaagatcattcacacttctgtgtgggcgggacagaaacgtctgggacagctggcc
aagtggaagacagctgaagaagtggctgccctgattcgctctcttcctgttgaagagcag
ccaaaacagattattgtaaccaggaaaggcatgttggatcctcttgaggtccacttgctt
gacttccccaacattgtcatcaaaggctctgagttgcagctgcctttccaggcttgccta
aaagtggagaagtttggagatttaatcctgaaggccacagagcctcagatggtgctgttc
aatctctatgatgactggcttaagaccatctcatcttacacagccttctctcgactcatc
ctgatcctcagagctctccacgtcaacaatgatcgtgccaaggtcatcctaaaacctgac
aaaacaaccatcaccgagcctcatcacatctggcccacgctcacagatgaggagtggatc
aaggtggaagtgcagctcaaagacctaattctggcagattatggcaaaaagaataatgtc
aacgtggcctcgctcacacagtctgagatccgtgacatcatccttggtatggagatctct
gcaccgtcacagcagcgtcagcagattgctgagattgagaagcagaccaaagagcagtca
cagcttacggccacacagacgagaactgtcaacaaacacggtgacgagataatcacctct
accacctccaactatgagacccagactttctcctccaagaccgagtggagagtcagggcc
atttctgctgctaatctccatctccgaacaaaccacatctacgtgtcttctgatgacatc
aaagagacgggttacacctacatcctgcccaagaacgtcctcaagaagttcatctgtatc
tcagatctgagagcacagattgctggctacctttatggcactagcccaccagacaacccc
caggtaaaggagatccgttgtatcgtcatggttccacaatggggtacacaccagaccgtt
cacttgcccaaccagctgcctggccatgaatatcttaaagaaatggaaccccttggctgg
atccacactcaacccaatgagtcaccgcagctgtccccacaagatgtcaccacccatgca
aagatcatggctgacaacccctcctgggatggagaaaagaccatcatcattacttgcagc
ttcacccctggctcgtgcacgctcacagcctacaagctgacccccagcggttatgagtgg
ggcagacaaaacacagacaagggaaacaaccccaaaggctacctgccgtcccactatgag
agagtgcagatgctgctctctgatcgcttccttggcttcttcatggtgcctggccaggtg
tcctggaactacaacttcatgggtgtgcgccatgaccccaacatgaagtatgacctgcag
ctcgcaaaccccaaggagttctaccatgaagtccaccggccttcgcacttcctgaacttt
gcctcactgcaggagggtgagatctacaacgcagaccgagaggacatgtacgcctga
DBGET
integrated database retrieval system
