Cupriavidus necator NH9: BJN34_36590
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Entry
BJN34_36590 CDS
T05121
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
cuh
Cupriavidus necator NH9
Pathway
cuh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cuh00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BJN34_36590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuh03021
]
BJN34_36590
Transcription machinery [BR:
cuh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BJN34_36590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Exonuc_VII_L
Sigma70_r4_2
IFT20
GTP_EFTU
GerE
Motif
Other DBs
NCBI-ProteinID:
AQV99395
UniProt:
A0A1U9V4T2
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All DBs
Position
pENH92:complement(316756..318786)
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AA seq
676 aa
AA seq
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MAATIVGQPVEENVLAKPVRDNSVSRVIAVTSKAARRAPKEKTQAVTTPLDIASMALQDE
ERQRQMRALIALGRERGYLTHADINDHLPDNFTQTAAMETIVSTFSDMGVAVYEQVPNAE
TLLLNDAAAAVASDDQADEEAEAALSTVDSEFGRTTDPVRMYMREMGARELLTRAGEIEI
AIRIEDGLQDMIQAIATCPWIVSTILVDADRIAAGELRIDELVDGINDDVNESEMTLESE
EVEVEADASDDDSDRDDVEMDGDDPEKTNAARLEQLRNDSLAVFARVRALFEQLPDVPVI
GKTRSAAVAQLRSAIQRELAPIRFTARAIDRLCASVHAQVTEVRAIERSILEIAVDRCGM
PRDAFVESFPGHETDLAWTSRMAATSRQFGAALERHLPAIQAGQQKLIDIEARVSLPLQQ
LKQINRQMSAAELKMRQAKRELIEANLRLVISIAKKYVNRGMQFLDLIQEGNIGLMKAVD
KFEYRRGWKFSTYATWWVRQAVTRALADQARTIRVPVHMIELVNKLNRISREFLQQTGQE
AHPAVLAERMEMSEEKVRSILRIAKQPVSLETPVGDDADATLGDMIEDLSASSPTEAAIH
ANMRAAIDEALDELSPREAKVLRMRFGLDTTSDHTLEEVGKQFDVTRERIRQIESKAMRK
LMHPSRADKLRPFLER
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgacgatcgtcggccaacctgtcgaggagaatgtattggcaaagccagttcgc
gacaattcagtgtcccgcgtgatcgcggttacgtcaaaagccgcccggcgcgcaccgaag
gaaaagacccaggccgtcacaacaccgctggacatcgcgtcaatggcgctccaggacgag
gagcgtcaacgccagatgcgcgcgctgatcgcgcttggccgtgagcgcggctatctcacc
cacgcggacatcaacgatcacctgcccgacaactttacgcaaactgctgcgatggagacg
atcgtcagcacgttcagcgacatgggggtggccgtgtacgagcaggtgccgaacgcagag
acgctcctgctaaacgacgccgcggccgccgtggcatccgacgatcaggcggacgaggaa
gcggaagctgcactgtcgaccgtcgattccgaattcggccgcactactgatccggtccgg
atgtatatgcgtgaaatgggtgcccgcgaactgctgacccgcgctggcgaaatcgagatc
gcaatacgcatcgaagacggcctgcaggacatgattcaggcgatcgccacgtgtccgtgg
atcgtgtccacgattcttgtcgatgcggaccgtatcgctgccggcgagctgcgtatcgac
gaactggtcgatggcatcaacgacgacgtgaacgaaagcgagatgacgctggagtccgaa
gaagttgaagtggaagcagacgcctccgacgatgactcagaccgtgacgacgttgaaatg
gacggcgacgatccggagaaaacgaacgcggcccgcctcgaacagctcaggaacgacagt
cttgcggttttcgcgcgcgtgcgtgcactgttcgagcagttgccggatgtacccgttatt
ggcaaaacccgttccgcggccgttgcgcaattgcgctcggcgatccagcgcgaactggcg
ccgatccgctttacggccagagccatcgaccgcctgtgtgccagtgtgcacgcacaggtt
actgaggttcgtgcgatcgaacgcagcatcctggagatcgccgtcgaccgttgcggcatg
ccacgcgatgcgtttgtcgagtcgttcccgggccacgagaccgaccttgcatggaccagc
cgcatggcggcgacttcgcggcaatttggcgcagcgcttgagcgacatctgccggccatt
caggccgggcagcagaaactcatcgacatcgaggcccgggtctcgctgccactccagcag
ctcaagcagatcaaccgccagatgagtgccgcggagttgaaaatgcggcaggccaagcgg
gagctgatcgaagcgaatcttcgtcttgtcatttcaattgccaagaaatacgtgaaccgc
ggcatgcagttcctggatctgatccaggaaggcaatattggcctgatgaaggcggtggac
aagttcgaataccggcgcggctggaagttttcgacgtacgccacttggtgggtccgccag
gctgtcacgcgtgcgcttgctgatcaggcgcgcaccattcgtgtgccggtgcatatgatc
gagctggtcaacaagctgaaccggatttcgcgcgaattcctgcaacagacgggacaggaa
gcgcatcccgccgtgctcgcggagcgcatggagatgtccgaggaaaaagtgcgcagtatc
ctcaggatcgcgaagcaacctgtctcgctcgagacccctgtgggcgacgatgccgacgcg
acgctcggcgacatgattgaggatctctctgcgagttcaccgactgaggccgccattcat
gcgaacatgcgcgccgcgatcgatgaggcactcgacgagttgtcgccgcgcgaggccaag
gtcctgcggatgcggttcgggctcgatacgacctctgaccacacgcttgaagaggtcggc
aagcagttcgacgtgacccgcgagcggatccgtcagattgagagcaaggcgatgcgcaag
ctgatgcatcccagtcgcgctgacaagttgaggcccttcctcgagcgctga
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