Corynebacterium ulcerans 210932: Cul210932_0385
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Entry
Cul210932_0385 CDS
T03406
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cun
Corynebacterium ulcerans 210932
Pathway
cun03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cun00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cul210932_0385 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cun03021
]
Cul210932_0385 (rpoB)
03400 DNA repair and recombination proteins [BR:
cun03400
]
Cul210932_0385 (rpoB)
Enzymes [BR:
cun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cul210932_0385 (rpoB)
Transcription machinery [BR:
cun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cul210932_0385 (rpoB)
DNA repair and recombination proteins [BR:
cun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cul210932_0385 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
DUF6751
Motif
Other DBs
NCBI-ProteinID:
AIT88349
UniProt:
A0ABD7MTX7
LinkDB
All DBs
Position
389839..393375
Genome browser
AA seq
1178 aa
AA seq
DB search
MVVNIAGPPPREVLEGPILAVSRQTKSVADIPGAPERFSFAKITEPIEVPGLLDIQLDSF
AWLIGTPEWRARQQEELGENVRVTSGLEDILEELSPIQDYSGNMSLSLSEPRFEDMKNTI
DECKDKDINYSAPLYVTAEFINNETQEIKSQTVFIGDFPMMTNKGTFIVNGTERVVVSQL
VRSPGVYFDQTIDKSTERPLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLK
ALGWTTEQITERFGFSEIMMSTLESDGVANTDEALLEIYRKQRPGEQPTRDLAQSLLDNA
FFRAKRYDLAKVGRYKVNRKLGLGGDNEGLMTLTEQDIATTLEYLVRLHAGESTMVAPNG
DVIPVDTDDIDHFGNRRLRTVGELIQNQVRVGLSRMERVVRERMTTQDAESITPTSLINV
RPVSAAIREFFGTSQLSQFMDQNNSLSGLTHKRRLSALGPGGLSRERAGIEVRDVHASHY
GRMCPIETPEGPNIGLIGSLASYARVNSFGFIETPYRKVENGVLTDQIDYLTADEEDRFV
VGQAHVEVDANGKITADSVTVRVKNGDIQVVAPESVDYLDVSPRQMVSVATAMIPFLEHD
DANRALMGANMQRQAVPLVRSEAPFVGTGMERRAAYDAGDLIINKKAGAVENVSADFITV
MADDGTRETYMLRKFERTNQGTCYNQIPLVNLGDRVEAGQVLADGPGTHNGEMSLGRNLL
VAFMPWEGHNYEDAIILNQRVVEEDILTSIHIEEHEIDARDTKLGAEEITREIPNVSEDV
LKDLDERGIVRIGADVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVP
HGETGKVIGVRRFSREDDDDLAPGVNEMIRVYVAQKRKIQDGDKLAGRHGNKGVVGKILP
QEDMPFMPDGTPVDIILNTHGVPRRMNIGQVLEVHLGWLAAAGWKIDPEDPANAELLKTL
PEELYDVPAGSLTATPVFDGATNEEVAGLLANSRPNRDGDVMVDENGKAQLFDGRSGEPF
PYPVSVGYMYMLKLHHLVDEKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMQAY
GAAYTLQELLTIKSDDVVGRVKVYEAIVKGENIPDPGIPESFKVLLKELQSLCLNVEVLS
ADGTPMELSGSDDDEFDQAGASLGINLSRDERSDADIA
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcaatattgcggggccaccgccgcgtgaggtgctggaaggacccatcttggca
gtctcccgccagaccaagtcagtggccgacatccccggggctcccgaacgtttttcgttc
gccaaaattacggaacctattgaggtcccgggacttctcgatattcagctagattccttc
gcatggctcattggcacgcctgagtggcgtgcccgccagcaggaggagctgggtgaaaac
gtccgcgtaaccagcggactggaagacatcctggaggagctctctccgattcaggattat
tccggaaatatgtcattgtctctctcggagccacgcttcgaggacatgaagaacactatc
gatgagtgtaaagacaaggacattaactattctgcgccgctttatgtgactgcagaattc
atcaacaacgaaactcaggagatcaagtcccagactgtcttcatcggtgacttcccgatg
atgaccaacaagggaacattcattgtcaacggcaccgagcgtgtcgtggtctcccagctt
gttcgttcgcctggtgtttactttgaccagacgattgataagtccaccgagcgtccactg
cactctgtgaaggtgatcccttctcgcggtgcatggttggaattcgacgtggacaagcgc
gacaccgttggtgtgcgtattgaccgcaagcgtcgccagccggtgacggttctgctcaag
gctcttggttggaccaccgagcagatcacggagcgctttggcttctccgaaattatgatg
tccacgctcgagtcagacggtgtagctaacaccgatgaggctctgctggagatctaccgc
aaacagcgtccgggcgagcagccgactcgtgacctcgcacagtcactgctagacaacgcc
ttcttccgcgcgaagcgttacgaccttgccaaggttggacgttacaaagtgaaccgcaaa
ctcggtcttggtggagacaacgagggcttgatgaccctcaccgagcaggacatcgccacc
accctcgagtacctcgtacgcctccatgcaggcgagagcaccatggttgcaccaaacggc
gatgtgattcctgtggacacagatgacatcgaccactttggtaaccgtcgtctgcgtact
gtcggagaactgatccagaaccaagtccgcgtgggtctgtcccgcatggagcgcgtggtt
cgcgagcgcatgacaactcaggacgcggagtctattactcctacctccctgatcaacgtg
cgcccggtttctgctgccatccgtgagttctttggcacctcccagctctcgcagttcatg
gaccagaacaactccctgtctggccttactcacaagcgtcgtctctccgctctgggccca
ggtggcctttcgcgtgagcgcgctggcatcgaggttcgagacgttcacgcttctcactat
ggccgtatgtgcccgattgagactcccgaaggtccgaacattggtttgattggttccttg
gcttcctatgcacgagtgaactctttcggattcatcgagaccccttaccgcaaggtagaa
aacggcgttctcaccgatcagatcgactacctcaccgcagatgaggaagaccgctttgtg
gtgggccaggctcacgtcgaggtggacgcgaacggcaagatcactgcggacagcgttacc
gtgcgtgtgaagaatggtgacattcaggtcgtcgcaccggaaagcgttgattacctcgac
gtttccccacgtcagatggtttctgtggctaccgccatgattccgttccttgagcacgac
gacgctaaccgtgccctcatgggcgcgaacatgcagcgtcaggctgtgccgctggttcgt
tcggaagctccgttcgttggaaccggtatggagcgtcgtgctgcttacgacgccggcgat
ctcatcatcaacaagaaggctggcgctgtagaaaacgtctccgctgacttcatcaccgtg
atggctgatgacggcacccgcgagacctacatgctgcgcaagttcgagcgcaccaaccag
ggcacctgctacaaccagatcccattggtaaacttgggcgaccgcgttgaggctggacag
gttcttgcagatggccccggtactcacaatggtgagatgtcgcttggacgtaacctcctt
gttgcgttcatgccttgggaaggccacaactacgaggacgctattatcctcaaccagcgt
gttgtggaagaggacatccttacttcgatccacatcgaggagcacgagattgatgcccgc
gacaccaagcttggtgccgaggagattactcgtgagatcccgaatgtgtccgaggatgtg
ctcaaggacctcgacgaacgcggtatcgtccgcatcggcgccgacgtccgcgatggcgac
atcttggtgggtaaggtcactcctaagggtgagaccgagctgacccctgaagagcgtctg
ttgcgtgcaatcttcggtgagaaggcacgcgaggttcgcgatacctctatgaaggttcct
cacggcgagaccggtaaggtcatcggcgttcgtcgtttctcccgtgaagacgatgacgat
ctcgcacctggtgttaacgagatgattcgcgtttacgttgcccagaagcgcaagatccag
gacggcgataaactcgctggtcgccacggtaacaagggtgttgttggcaagattcttccg
caggaagatatgccattcatgcctgacggtaccccggtcgatatcatcctgaacacgcac
ggtgtgcctcgtcgtatgaacatcggccaggttctggaagtccaccttggttggttggct
gctgccggttggaagatcgatcctgaagatcctgctaacgctgagctgctgaagactctg
cctgaggagctatacgacgtccctgctggttcgctcaccgcaaccccagtgttcgacggc
gctaccaacgaggaagttgctggtcttcttgccaactcccgtccaaaccgcgacggcgac
gtcatggtggacgaaaacggcaaggcacagcttttcgacggccgttctggcgagcctttc
ccatacccagtgtctgtcggctacatgtacatgctgaagctgcaccacttggttgatgag
aagatccacgcacgttccaccggcccttactccatgattactcagcagccgctgggcggt
aaggcgcagttcggtggacagcgcttcggcgaaatggaggtgtgggcaatgcaggcttat
ggcgctgcctacacgcttcaggagcttctgaccatcaagtctgacgacgtggtcggccgt
gtgaaggtctacgaggcaatcgttaagggcgagaacattccggatccgggtatccctgag
tccttcaaggtgctcctcaaggaacttcagtcgctgtgcttgaacgtggaagttctttct
gcagacggcactccgatggagctgtccggttcggatgacgacgagttcgaccaggctggt
gcttcactaggcatcaacctgtctcgcgacgagcgttccgacgccgacatcgcctaa
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