Corynebacterium urogenitale: CUROG_06885
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Entry
CUROG_06885 CDS
T07467
Symbol
deaD1
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cuo
Corynebacterium urogenitale
Pathway
cuo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cuo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CUROG_06885 (deaD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuo03019
]
CUROG_06885 (deaD1)
03009 Ribosome biogenesis [BR:
cuo03009
]
CUROG_06885 (deaD1)
Enzymes [BR:
cuo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CUROG_06885 (deaD1)
Messenger RNA biogenesis [BR:
cuo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CUROG_06885 (deaD1)
Ribosome biogenesis [BR:
cuo03009
]
Prokaryotic type
rRNA helicases
CUROG_06885 (deaD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
UvrA_inter
CMS1
Cas3-like_C_2
adh_short
Motif
Other DBs
NCBI-ProteinID:
QFQ02732
UniProt:
A0A5J6Z943
LinkDB
All DBs
Position
complement(1568442..1570604)
Genome browser
AA seq
720 aa
AA seq
DB search
MSDTENVAGDVNKPVEDDLSVTQNSLHSENDGDKPLDVADVLGDTSDASKAPTDQVAETA
AEQEIAEESENDEKAEDVSEENEGPRFGELGLPDDVLDAVSKVGFEQPSPIQAETIPVLM
DGHDVVGLAQTGTGKTAAFALPVLSRIDKSKRHPQALVLAPTRELALQVAESFQSFSEHL
GGISVLPIYGGQSYGVQLSGLRRGAHIVVGTPGRVIDHLEKGSLDISGLRFMVLDEADEM
LNMGFQEDVERILSDTPEDKQVALFSATMPNGIRRLSKQYLNQPVEITVKAAQRTSENIE
QDYLFVNHRNKLDALTRILEVTEFEAMIMFVRTKNETEELAERLRARGFNAAAINGDIAQ
VQRERTVDQLKDGRLDILVATDVAARGLDVDRITHVFNYDIPHDTESYVHRIGRTGRAGR
KGRAILFVTPRERRLLKAIERATKSRLNEIELPTVDEVNDARKEKFYDALTESLGDPQMQ
MFRDLVTSYAKSNEVSMEDIAAALATQLQSGEEFLMKEPPKDERPQRRRGDRYGDDNRRG
GGSARPFEERFNKKAPTVVDRNGKELSVYRLNVGHRQRVRPGAIVGALANEGGMNSRDFG
RISIFAEHSLVELPSDLPEEVFRLLDDTRVSGQLINIEPDPGAPAGRPAHHKRRDRDDRD
DRGGRGGFGRDRGGRGGHRGGRGRFNDRGDRAGRFNDDRGDRGRRNDRGDRRDHRNRGHR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatactgaaaacgtcgccggcgacgtgaacaagccggtcgaagacgatttgtcg
gttactcagaacagtctgcatagcgagaatgatggcgacaagccattggatgtggctgat
gtgttgggggatacctctgacgcgtccaaggcgccgaccgaccaggtagcggagaccgcc
gcagagcaagagatcgcagaagagtctgagaacgacgaaaaagccgaagatgtaagtgaa
gagaacgagggtccacggtttggcgagttgggccttcccgatgatgtcctggatgcggtg
agcaaggttggctttgagcagccatcccccatccaggccgagaccattccagtgctgatg
gatggtcacgatgttgtgggcctggcgcagaccggtaccggcaagactgccgcgttcgca
ctgccagtcctgtcccgaatcgataagagcaagcgccaccctcaagcgctggttcttgcg
cctacccgtgagctggctctgcaggttgcggagtccttccagtctttctcggagcatctt
ggcggaatttccgtcctgccgatctatggtggccagtcgtatggtgtgcagctctccggg
ctgcgcaggggtgctcacatcgtggtgggtacgccagggcgtgtcattgatcacctggag
aagggcagcctggatatctccgggttacgtttcatggttctcgatgaagctgatgagatg
ctcaacatgggcttccaggaggacgttgagcgcattctgtccgatacgccggaggataag
caggttgctttgttttccgcgacgatgcccaatggcatccgccggttgtccaagcagtac
ttgaaccagcctgttgagatcactgttaaggcagctcagcgcacatccgagaacatcgag
caggattatctgttcgtcaatcaccgcaacaagttggacgccctgacccgcatcctcgag
gtcacggagttcgaggcgatgataatgttcgtccgcacgaagaatgagaccgaggagctc
gcggaacgcctgcgagctcgaggtttcaacgcagctgccatcaacggagacatcgcgcag
gtgcagcgtgagcgtaccgtggatcagttgaaggacgggcgtctggacatcctggtggcc
acggatgtggctgcacgcggtttggatgtcgaccgcatcacgcacgtatttaactacgat
attccgcacgacacggagtcctacgtgcaccgcattggccgtaccggccgcgcggggcgc
aaggggcgtgcgattctgttcgtcactccacgcgaacgccgtttgctgaaggccatcgag
cgtgcgacgaagtctcgcctcaatgagattgagttgccgacggttgatgaggtcaacgat
gcgcgtaaggagaagttctacgacgcactgaccgaatccctcggtgatcctcagatgcag
atgttccgcgacctggtcaccagctacgcgaagagcaatgaggtgtcgatggaagacatc
gcagctgcgctggctacacagctgcagtccggcgaagagttcctcatgaaggagcccccg
aaggacgagcggccacagcgtcgccgcggggatcgttacggagacgacaaccgtcggggt
ggtggttccgcccgcccattcgaggagcgtttcaacaagaaggctcctaccgttgtggac
cgcaatgggaaggaactatccgtgtatcgacttaacgtcggccaccgtcagcgtgtccgt
ccgggcgcgatcgtcggtgccttggctaacgaaggtggaatgaattcccgcgacttcggg
cgcatcagcatttttgcggagcattccttggttgagttgccgtctgacctaccagaggaa
gtgttccgcctgttggacgatacccgcgtttccggccagctcattaatatcgagccggat
ccgggagcgccagctggccgcccggcacatcacaagcggcgcgatcgtgatgaccgcgat
gaccgcggtgggcgtggaggctttggccgcgatcgtggtggtcggggtgggcaccgcggt
ggccgaggtcgcttcaacgaccgtggtgaccgagctggtcgctttaacgatgaccgtggt
gaccgtggccgtcgcaatgatcgtggagaccgccgcgatcaccgcaataggggtcaccgc
taa
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