Campylobacter ureolyticus: CUREO_1277
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Entry
CUREO_1277 CDS
T04021
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cure
Campylobacter ureolyticus
Pathway
cure03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cure00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CUREO_1277 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cure03021
]
CUREO_1277 (rpoB)
03400 DNA repair and recombination proteins [BR:
cure03400
]
CUREO_1277 (rpoB)
Enzymes [BR:
cure01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CUREO_1277 (rpoB)
Transcription machinery [BR:
cure03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CUREO_1277 (rpoB)
DNA repair and recombination proteins [BR:
cure03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CUREO_1277 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AKT91120
UniProt:
A0AAU8U069
LinkDB
All DBs
Position
complement(1271601..1275740)
Genome browser
AA seq
1379 aa
AA seq
DB search
MLNSLYSGNRLRVDFSKAKKEIDIPNLLQLQKKSFDSFLYKKDSVESGMERAIKSIFPIH
DPQNRLSLEYVDYEILKPKYSIRECVERGLTYSVSSKMKIRLVIYDKDEKTGEKTGIKEI
KEQEIFLRDIPLMTDRVSFIINGVERVVVNQLHRSPGVIFKEEESPTVSNKRIYTAQIIP
DRGSWLYFEYDAKDILYVRINNKRKMPITILFRALGYGKQDIIKLFYPIKTLRVEKGKFL
TKFDPKDYTTRLEYDIKDPKGNIVHQSGKRLTPSKAKKLIDDGLEYVEYPIDVLLERYLF
DPIINNESGEILYDTLSLLDETKIEKILKSQKEITIINDLADGVDNSVINSFLQDGDTLK
TLQQLEKIDNENDLAAIRIYKVMRPGEPVVKEAAREFVNDLFFNPERYDLTKVGRMKMNH
KLGIEVPEYVTVMTSEDIIKTAKYLIGVKNGKGFIDDRDHLGNRRIRSIGELLANETHLG
LVKMQKTIRDKFTTLSNNVDELMPHDLVNARIITTTLMEFFTVGQLSQFMDQTNPLSEVT
HKRRLSALGQGGLVKERAGFEVRDVHPTHYGRICPIETPEGQNIGLINTLATYAKVNDLG
FVEAPYRKVVNSKVTDDIVYLTATQEEGIVIAPASAKVDEDGNLLDEFLEARKDGENILA
RKEEVGLIDLCSGMIAGVAASLIPFLEHDDANRALMGSNMQRQAVPLLKPIAPIVGTGME
ATIARDSWTAVKAKRAGIVEKVDSKNIFILGEDESGPFIDHYSMEKNLRTNQNTMFSQHP
IINKGDEIKAGQIIADGASMHEGELALGKNALVAFMPWHGYNYEDAVVMSEKMIRNDEYT
SIHVYEKSIEARELKDGVEEITRDIPNVKEEELIHLDESGIVKIGTEVRSGMILVGKVTP
KGEVKPTPEERLLRAIFGEKAGHVVNKSLYANSSTEGVVIDVKIFTKKGYEKDSRAIKAY
EAEKTTLEKEHHDRLLMLDREETLMVSSLLEKKPLKEDGKLGKLEFKKGDFVPRSDLEES
NRFALNSFIKSYEKSIQTEYDDIKNHFQNEKKKLKEDHDEKLEILEKDDILPSGVVKLVK
VYIATKRKLKVGDKMAGRHGNKGIVSNIVPEVDMPYLPSGKRVDIVLNPLGVPSRMNIGQ
IMESHLGLVGVKLGEQIEKMMEEKTGEWIKNLRAKMIDIASTSKLMNAKKTLEKLSDDEL
LKYARDWSHGIKFAAPIFEGIVPEDFEKLFKMANIDPDGKTELYDGRTGEKFKERVNVGC
MYYLKLHHLVDEKVHARSTGPYSLVTQQPVGGRALSGGQRFGEMEVWALEAYGAAYTLRE
MLTIKSDDIDGRLEAYKALIRGENVPSAGVPETFFVLTKELKSLALDINIFKKEDEDNE
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atgctaaatagcctatattctggaaatcgtcttagggttgatttttcaaaagccaaaaaa
gagattgatattccaaatttattacaattacaaaaaaagagttttgatagttttttatat
aaaaaagacagtgttgaaagcggtatggaaagagccataaaatcaatttttcctatacac
gatccacaaaacagacttagtttagaatatgttgattatgaaattttaaaaccaaaatat
tcaattagagaatgcgtagaaagaggattaacctactccgtaagctcaaaaatgaaaatc
agacttgttatttatgataaagatgaaaaaactggagaaaaaacaggaattaaagaaata
aaagaacaagagatatttttaagagatattcctttaatgactgatagagtttcttttatc
ataaatggggttgaaagagttgttgtaaatcaacttcatagaagtcctggtgttattttt
aaagaagaagaaagcccaacagtatcaaacaaaagaatttatacagcacaaataatacca
gatagaggtagttggctttattttgaatatgatgcaaaagatattttatatgtccgtata
aataataaaagaaaaatgcctataactattttgtttagggcacttggatatggaaaacaa
gatattataaaacttttttatcctataaaaacacttcgtgttgaaaaaggtaaattttta
acaaaatttgatccaaaagactatacaacaaggttggaatacgatataaaagatccaaaa
ggaaacattgttcatcagtctggaaaaagacttactccaagtaaggctaaaaaacttatt
gatgatggtttggaatatgtagaatatccaattgatgtattgcttgaaagatatcttttt
gatcctattataaataatgaaagtggagaaattttatacgatactttatcattgcttgat
gaaacaaaaatagaaaaaattttaaaatcacaaaaagaaattaccataataaatgacctt
gctgatggtgttgataatagtgttattaactcatttttgcaagatggcgacaccctaaaa
acgcttcaacaacttgaaaaaatagataatgaaaatgatcttgcagcaattagaatttac
aaagttatgcgtcctggcgaacctgttgtaaaagaagcagcaagagagtttgtaaatgat
cttttctttaacccagaaagatatgatttaacaaaagttggtcgtatgaaaatgaatcac
aagcttggtattgaagttcctgagtatgtaactgtaatgacaagtgaagatattataaaa
actgcaaaatatctaattggtgttaaaaatggaaaaggctttatagatgatagagatcat
ttaggaaatagaagaattagatctattggagagcttttggcaaatgaaactcatttaggt
cttgtgaaaatgcaaaaaactataagagacaaatttacaacacttagcaataatgtagat
gagttaatgccacatgatttagtaaatgcaagaattataacaactacattgatggaattt
ttcacagttgggcagcttagtcagtttatggatcagacaaatccattaagtgaagtaacc
cataaaagaagactctcagctcttggacagggtggtcttgtaaaagaaagagcaggattt
gaagtaagagatgttcacccaactcattatggtagaatttgtcctattgagacaccagaa
ggacaaaatattggtcttataaatacacttgctacttatgcaaaagtaaatgacttaggt
tttgttgaggcaccttatagaaaagtagtaaactcaaaagtaactgatgatatagtttat
ttaacagccacacaagaagaaggaattgtaatagcgcctgcctcagccaaagttgatgaa
gatggaaatttacttgatgagtttttagaggctagaaaagatggtgaaaatatactagct
agaaaagaagaagtaggtttaattgacttatgttctggcatgatagctggtgttgcagct
tcacttattccatttttggagcacgatgatgcaaacagagccttgatgggttcaaacatg
cagcgacaagcagttccacttctaaagccaattgctccaattgttggaacaggtatggaa
gctaccattgcaagagattcttggacagctgtaaaagcaaaaagagcaggaattgttgaa
aaagtagatagtaaaaacatatttattttaggtgaagatgaaagtggtccttttatagac
cattactcaatggaaaaaaacttaagaacaaatcaaaacacaatgttttctcagcatcca
attattaataaaggcgatgaaataaaagctggtcaaatcatagcagatggtgcaagtatg
catgagggtgaacttgctcttggtaaaaatgctcttgttgcatttatgccttggcatgga
tacaactacgaagatgccgttgttatgagtgaaaagatgattagaaatgatgaatataca
agtattcatgtttatgaaaaaagtattgaagcaagagaattaaaagatggtgttgaagag
ataactagagacattcctaatgtaaaagaagaagagcttatccatcttgatgaaagtgga
attgtaaaaattggtactgaggtaagatctggaatgattttagttggtaaagtaacccca
aaaggtgaagttaagccaactcctgaagaaagacttttaagagcaattttcggagaaaaa
gcaggccatgttgtaaataaatcattatatgcaaactcctcaactgaaggtgttgttata
gatgttaagatatttacaaaaaaaggatatgaaaaagactcaagagctataaaagcatat
gaggctgaaaaaacaacccttgaaaaagaacaccatgatagacttttgatgttggataga
gaagaaactttaatggtttcatctttgcttgagaaaaagccattaaaagaagatggaaaa
cttggtaagttggaatttaaaaaaggtgatttcgttccaagaagtgatcttgaagaaagt
aatagatttgctttaaatagctttataaaatcttatgaaaaatcaattcaaactgaatat
gatgatataaaaaatcacttccaaaacgagaagaaaaagctaaaagaagatcatgatgaa
aagcttgaaattttagaaaaagatgatattttaccaagtggtgttgtaaaacttgtaaaa
gtttatattgcaacaaagagaaaactaaaagttggtgataaaatggctggtcgtcacgga
aataaaggtattgtttctaatatcgttccagaagttgatatgccatatcttccaagcgga
aaaagagttgatatagttttaaacccattaggtgttccaagccgtatgaatattggacaa
attatggagagccacttaggtttagttggtgtaaaacttggcgaacaaattgaaaaaatg
atggaagaaaaaacaggtgaatggattaaaaatttaagagcaaaaatgattgatatcgca
agtacttcaaaacttatgaatgccaaaaaaactttagaaaagttaagtgatgatgagctt
ttaaaatatgcaagagattggagtcatggtattaaatttgctgcacctatttttgaaggt
attgtgcctgaggattttgaaaagctatttaaaatggcaaatattgatccagatggtaaa
accgaactttatgatggaagaactggtgaaaaatttaaagaaagagtaaatgtaggttgt
atgtattatctaaaacttcatcaccttgttgatgaaaaagttcatgcaagaagcacaggg
ccatattctcttgttacacaacaacctgtaggtggtagagcgctaagtggtggtcaaaga
tttggagaaatggaagtttgggcattagaagcttatggtgcggcttatacattaagagaa
atgctaacaattaaatcagatgatattgatggcagacttgaagcttataaagctttaatt
agaggtgaaaatgttccatcagcaggtgttcctgaaacattttttgttttaacaaaagag
cttaaatcattagcacttgatataaatatatttaaaaaagaggatgaggataatgagtga
DBGET
integrated database retrieval system
