Curtobacterium sp. C1: LQK89_15770
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Entry
LQK89_15770 CDS
T10648
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
curz Curtobacterium sp. C1
Pathway
curz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
curz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LQK89_15770 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
curz03021
]
LQK89_15770 (rpoB)
03400 DNA repair and recombination proteins [BR:
curz03400
]
LQK89_15770 (rpoB)
Enzymes [BR:
curz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LQK89_15770 (rpoB)
Transcription machinery [BR:
curz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LQK89_15770 (rpoB)
DNA repair and recombination proteins [BR:
curz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LQK89_15770 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
UFU13934
LinkDB
All DBs
Position
complement(3283736..3287224)
Genome browser
AA seq
1162 aa
AA seq
DB search
MAAAPNASTNPKNGRNHSRLSFAKITDTLTVPDLLALQTESFDWLVGNDVWKARLAEGQE
QGRTDLALHSGLEEIFEEISPIEDLGETMQLSFTSPELEDPKYSIDECKERGKTYAAPLY
VNAEFMNHMTGEIKTQTVFMGDFPLMTERGTFIINGTERVVVSQLVRSPGVYFERQQEKT
SDKDIYSARIIPSRGAWLEFEIDKRDQVGVRIDRKRKQSVTVFLKALGLTSEEIMEEFQG
FASIESTLEKDAVLTKEEALKDIYRKLRPGEQVAAEAARALLDNFYFNPKRYDLAKVGRY
KLDRKLGIDAPLSDSVLSVQDIVRTIKYLVSLHAEKTTLDGVRDGEPVQLRLDVDDIDHF
GNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDIEAITPQTLINVRPVVAAIKEFFGT
SQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRERAGVEVRDVHPSHYGRMCPIETPEGPN
IGLIGSLASFGRINSFGFIETPYRRVVNGQVTTQIDYLTASEEDDFVVAQANAPLTDSFH
FADDKVLVRKKGGEVELVGKDEVDYMDVSPRQMVSVATSLIPFLEHDDANRALMGANMQR
QAVPLLRSESPLVGTGMEGYTAIDAGDVVTADKAGVVSEVSADAVTLQLDEGGTQTYYLR
KFDRSNQGTSYNHRVIVSAGERVEQGEVIADGPATENGELALGKNLLVAFMPWEGYNYED
AMILSQNLVKDDTLSSIHIEEYEVDARDTKLGKEEITRDLPNVSPDLLADLDERGIIRIG
AEVRPGDILVGKVTPKGETELSAEERLLRAIFNEKSREVRDTSLKVPHGEEGTIIGVKVF
DAQDGDDELGSGVNQRVVVYIAQKRKITAGDKLAGRHGNKGVISTILPVEDMPFLADGTP
VDIVLNPLGVPGRMNFGQVLEIHLGWLAKQGWNVEGIQEWASALPEAARHAEPGTKVATP
VFDGAYEREIEGLLDSTLPNRDGERLIGSSGKAQLFDGRSGEPFPEPVSVGYMYILKLHH
LVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
ILGRVKVYEAIVKGENIQEPGIPESFKVLMKEMQSLCLNVEVLSADGQAVSLRDTDDEVF
RAAEELGINISSRFESSSVDDI
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
ttggctgctgcgcccaacgcatccaccaaccccaagaacggtcgcaaccactcgcgactc
tcgttcgccaagatcacggacacgctcacggtccctgatctgctcgcactccagacggag
agcttcgactggctcgtcggcaacgacgtctggaaggcccgcctggccgagggacaggag
cagggtcgcaccgacctcgcactgcactccggcctcgaggagatcttcgaggagatctcc
ccgatcgaggacctcggcgagacgatgcagctctcgttcacgtccccggagctcgaggac
ccgaagtactccatcgacgagtgcaaggagcgcggcaagacctacgccgctccgctctac
gtcaacgccgagttcatgaaccacatgaccggtgagatcaagacgcagaccgtcttcatg
ggcgacttcccgctcatgaccgagcgcggcacgttcatcatcaacggcaccgagcgcgtc
gtcgtctcgcagctcgtccgctcgccgggcgtgtacttcgagcgccagcaggagaagacg
tccgacaaggacatctactccgcgcgcatcatcccctcgcgcggtgcctggctcgagttc
gagatcgacaagcgcgaccaggtgggcgtgcgcatcgaccgcaagcgcaagcagtccgtg
accgtcttcctcaaggccctcggcctgacgagcgaggagatcatggaggagttccagggc
ttcgcctcgatcgagtcgacgctcgagaaggacgccgtcctgacgaaggaagaggcgctc
aaggacatctaccgcaagctgcgtccgggcgagcaggtcgccgccgaggccgcgcgtgcg
ctcctcgacaacttctacttcaacccgaagcgctacgacctggccaaggtcggtcgctac
aagctcgaccgcaagctcggcatcgacgcgccgctgtcggactcggtgctctccgtgcag
gacatcgtccgcacgatcaagtacctcgtctcgctgcacgccgagaagaccacgctcgac
ggtgtccgcgacggcgagcccgtccagctccgcctcgacgtggacgacatcgaccacttc
ggcaaccgtcgcatccgcgcggtgggcgagctcatccagaaccaggtccgcacgggtctg
tcccgcatggagcgcgtcgtccgcgagcgcatgaccacgcaggacatcgaggccatcacg
ccgcagacgctcatcaacgtgcgtcccgtcgtggctgcgatcaaggagttcttcgggacg
tcccagctgtcgcagttcatggaccagaacaacccgctcgcgggtctgacgcacaagcgt
cgcctgtcggccctcggcccgggtggtctgtcccgtgagcgtgccggcgtcgaggtccgc
gacgtccacccgtcgcactacggccgcatgtgcccgatcgagaccccggaaggcccgaac
atcggcctgatcggctcgctcgcgtccttcggtcggatcaactcgttcggcttcatcgag
acgccgtaccgccgggtcgtgaacggtcaggtcaccacccagatcgactacctgacggca
tcggaagaggacgacttcgtcgtcgcccaggccaacgcgccgctcaccgactccttccac
ttcgcggacgacaaggtcctcgtgcggaagaagggcggcgaggtcgagctcgtcggcaag
gacgaggtcgactacatggacgtctcgccgcgccagatggtgtcggtcgcgacctcgctc
atcccgttcctcgagcacgacgacgcgaaccgcgccctcatgggtgcgaacatgcagcgc
caggccgtgccgctcctgcgttccgagtcgccgctcgtcggcaccggcatggagggctac
accgccatcgacgccggtgacgtcgtcaccgccgacaaggccggtgtggtctccgaggtc
tcggccgacgccgtgaccctgcagctcgacgagggcggcacgcagacctactacctgcgc
aagttcgaccgctcgaaccagggcacgagctacaaccaccgcgtcatcgtctccgcaggc
gagcgcgtggagcagggcgaggtcatcgccgacggccccgcgacggagaacggcgagctc
gcgctcggcaagaacctcctcgtcgcgttcatgccgtgggagggctacaactacgaggac
gcgatgatcctgtcgcagaacctcgtgaaggacgacacgctctcctcgatccacatcgag
gagtacgaggtcgacgcccgcgacaccaagctcggcaaggaagagatcacccgcgacctg
ccgaacgtcagcccggacctcctggccgacctcgacgagcgcggcatcatccgcatcggt
gccgaggtccgccccggcgacatcctggtcggcaaggtcacgccgaagggcgagaccgag
ctctccgccgaggagcgcctgctccgtgcgatcttcaacgagaagtcgcgcgaggtgcgc
gacacctcgctgaaggtgccccacggtgaagagggcacgatcatcggcgtcaaggtcttc
gacgcccaggacggtgacgacgagctcggctccggtgtgaaccagcgcgtggtcgtctac
atcgcccagaagcgcaagatcaccgccggtgacaagctcgccggtcgtcacggcaacaag
ggcgtcatctcgacgatcctgccggtcgaggacatgccgttcctggcggacggcaccccg
gtcgacatcgtgctcaacccgctcggcgtccccggccgcatgaacttcggccaggtcctc
gagatccacctcgggtggctcgcgaagcagggctggaacgtcgagggcatccaggagtgg
gcgtccgccctccccgaggccgcccgccacgcggagcccggcacgaaggtcgccaccccg
gtgttcgacggtgcgtacgagcgcgagatcgagggcctcctcgactccacgctcccgaac
cgcgacggggagcgcctgatcggctcctccggcaaggcgcagctcttcgacggccgctcc
ggcgagccgttcccggagcccgtctcggtcggctacatgtacatcctcaagctgcaccac
ctggtcgacgacaagatccacgcccgttcgaccggtccgtactcgatgatcacgcagcag
ccgctgggtggtaaggcgcagttcggtggccagcgattcggtgagatggaggtgtgggcg
ctcgaagcgtacggcgccgcctacgccctccaggagctcctgacgatcaagtccgacgac
atcctcggccgcgtgaaggtctacgaggcgatcgtcaagggcgagaacatccaggagccg
ggcatccccgagtcgttcaaggtcctcatgaaggagatgcagtcgctctgcctgaacgtc
gaggtcctctcggccgacggccaggcggtcagcctccgcgacacggacgacgaggtcttc
cgtgccgctgaagagctcggcatcaacatctcctcgcggttcgagtcgtcctccgtcgac
gacatctga
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