Cupriavidus sp. USMAA2-4: BKK79_08960
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Entry
BKK79_08960 CDS
T05072
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cuu
Cupriavidus sp. USMAA2-4
Pathway
cuu03420
Nucleotide excision repair
cuu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cuu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BKK79_08960
03430 Mismatch repair
BKK79_08960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuu03400
]
BKK79_08960
Enzymes [BR:
cuu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BKK79_08960
DNA repair and recombination proteins [BR:
cuu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BKK79_08960
MMR (mismatch excision repair)
Other MMR factors
BKK79_08960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
Peripla_BP_2
AAA_11
RecR_HhH
AAA_12
ResIII
Motif
Other DBs
NCBI-ProteinID:
AOY91909
UniProt:
A0A1D9GWA8
LinkDB
All DBs
Position
1:2036883..2039009
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AA seq
708 aa
AA seq
DB search
MPASPDLDLLPADAGTDAATATVLPEPAPAAHLADLNPEQRAAAEHDGERPLLIIAGAGS
GKTNTLAHRVAHLVLSGTDPRRILLLTFSRRAAAEMGRRVERIVDRAVGGSGAGRAALQW
SGTFHAIGARLLREYAETIGLSPAFTISDRGDAADLMHMVRHDLGLSEQTARFPRKETCL
AIYSRAVNTQAPLDEVLRRHFPRYAMWEEALRTLFAAYVEAKQDQQVLDYDDLLLYWAQA
LGEPALAADMGARFDHVLVDEYQDTNALQASILLALKPDGRGLTVVGDDAQSIYAFRGAT
VRNILDFPEHFSPPAARVTLERNYRSTQPILAAANAVIAQAAERYSKELWSERASAEKPG
VVVVADEAEQARYVVERILERREAGLALLSQAVLFRAADHSAQLEIELTRRNIPFVKFGG
LKFLESGHVKDVLAMLRWLQNPRDRIAGFRALQLLPGFGPKTAGRMLDAIAVATQPLFAL
ESFTPPAAAEPAWADLLALARALLAPASSWPAGFEQVVAWYLPHLERMHDDAAARQADLQ
QLERIAATYASRERFLTELTLDPPDASSDESGVPLRDEDYLILSTIHSAKGQEWKAVYLL
NAVDGCLPSDLATGTTEEIEEERRLLYVAMTRARDHLDVVVPQRFYVHQQPGYGDRHVYA
SRTRFLPNRVMGNFHSRAWPPPPPVDAAPARSALPAVDLAAKMRKMWR
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgccagcctctcccgacctcgatctacttcctgccgacgccggcacggacgccgccacc
gcgaccgtgctccctgagcccgcgccggccgcgcaccttgccgacctcaatccggagcag
cgcgccgccgccgagcacgatggcgagcgcccgctgctgatcatcgccggcgccggctcc
ggcaagaccaacacgctcgcgcaccgtgtcgcccacctggtgctgtcgggaaccgacccg
cgccgcatcctgctgctgaccttctcgcgccgcgccgccgccgagatgggccggcgcgtc
gaacgcatcgtcgaccgtgccgtcggcggcagcggcgccggacgggcggcactgcaatgg
tcgggtaccttccacgcgatcggcgcccgcctgctgcgcgaatacgcggagacgatcgga
ctgtcgcccgccttcaccatcagcgaccgcggcgacgccgccgacctgatgcacatggtg
cgccacgatctcggcctgtccgagcagaccgcgcgctttccacgcaaggaaacctgcctg
gccatctattcgcgcgcggtgaatacccaggcgccgctggacgaggtgctgcggcgccat
ttcccgcgctatgcgatgtgggaagaggcgctgcgcaccctgttcgccgcctacgtcgag
gccaagcaggaccagcaggtgctcgactacgacgacctgttgctctactgggcgcaggcg
ctgggcgagcccgcgctggcggcggacatgggcgcacgcttcgaccatgtgctggtcgac
gagtaccaggacaccaacgcgctgcaggcctccatcctgctcgcgctcaagcccgacggg
cgcggcctgaccgtggtcggcgacgacgctcagtcgatctacgccttccgcggtgccacg
gtgcgcaacatcctcgacttccccgagcacttctcgccccccgcggcgcgcgtcacgctg
gagcgcaactaccgttccacccagcccatcctcgccgccgccaacgccgtcatcgcccag
gccgcggaacgctacagcaaggagctgtggagcgagcgcgcctcggccgagaagcccggc
gtggtggtggtggccgacgaggccgagcaggcacgctatgtggtcgagcgcatcctggag
cggcgcgaggccgggctggcgctgctgtcgcaggcggtgctgttccgtgcggccgaccac
agcgcccagctcgagatcgaactgacccggcgcaacatccccttcgtgaagttcggcggg
ctcaagttcctcgagtccggccacgtcaaggatgtgctggccatgctgcgctggctgcag
aacccgcgcgaccgcatcgccggcttccgcgcgctgcagctgctgccgggcttcggcccc
aagaccgccgggcgcatgctcgacgccatcgccgtggccacccaaccgctgttcgcgctg
gaatccttcacgccccccgcggccgcggaaccggcctgggccgacctgctggcgctggca
cgcgcgctgctggcaccagcctcgtcctggcctgccgggttcgagcaggtggtggcctgg
tacctgccgcacctcgaacgcatgcatgacgatgccgcggcgcgccaggccgacctgcag
caactcgaacgcatcgccgcgacctacgcctcgcgcgaacgcttcctcaccgaactgacg
ctcgatccgcccgacgcctccagcgatgaatccggcgtgccgctgcgcgacgaggactac
ctgatcctgtccaccatccactcggccaagggacaggaatggaaggcggtctacctgctc
aatgccgtggacggctgcctgccctcggacctggccaccggcaccaccgaggaaatcgag
gaagagcgccgcctgctctacgtggcgatgacgcgcgcgcgcgaccacctcgacgtggtg
gtaccgcagcgcttctacgtgcaccagcagccaggctacggcgaccgccacgtctacgcc
tcgcgtacgcgcttcctgcccaatcgcgtgatgggcaacttccacagccgcgcctggcca
ccgccccccccggtggatgccgcaccggcacgcagcgcgctgccggcggtggacctggcg
gcgaagatgcgcaagatgtggcgctag
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