Congregibacter variabilis: R0135_03405
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Entry
R0135_03405 CDS
T10777
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
cvb Congregibacter variabilis
Pathway
cvb00541
Biosynthesis of various nucleotide sugars
cvb01100
Metabolic pathways
cvb01250
Biosynthesis of nucleotide sugars
Module
cvb_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
cvb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
R0135_03405 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cvb01005
]
R0135_03405 (kdsB)
Enzymes [BR:
cvb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
R0135_03405 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
cvb01005
]
Lipid A
R0135_03405 (kdsB)
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
WOJ94219
UniProt:
A0ABZ0I6L9
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Position
complement(754453..755250)
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AA seq
265 aa
AA seq
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MSFVVVIPARYASTRLPGKPLSMIAEKTMLQHVWERARTSVASRVVIATDDTRIAAVCGD
FGAEALMTSPDHASGTDRLAEVVQALGLSDDQIVVNVQGDEPLIPATVINQVASNLAREE
TASIATLCEAITDVEVLRDPNAVKVVFDEAGRALYFSRAIIPWPRDHLWESAEMPLGNWY
RHIGLYAYRAGFLRRYTQWQPAPIELAESLEQLRALHKGEGIHVETACEPVPGGIDTPED
LHRLRQQFADLSVSTAATITTSTGE
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgttgtggttattcccgcgcgatacgcttccacacgcctgccgggtaagcct
ttgtcgatgattgccgaaaaaaccatgctccagcacgtttgggaaagagccagaacttct
gtcgccagccgtgttgtcatagccacggatgacacacgcattgcagcggtatgcggtgat
tttggcgccgaggctttaatgacaagtccagatcacgccagcggtacggatcgattggct
gaggtggttcaggcgctggggttgtccgatgatcaaattgtagtgaacgtgcagggtgat
gagcctttgatccctgcgacagtgatcaatcaggtcgctagtaacctggcgcgcgaagag
actgccagcattgcgacgctgtgcgaagctatcacggacgtcgaagtactccgtgatccc
aacgctgtcaaagtcgtgttcgatgaagcaggccgagcactttactttagccgcgcaatt
attccctggccccgggaccatctgtgggagtcagcagaaatgcctttgggtaactggtat
cgccatatcggcctgtatgcctacagggccgggtttctgcgtcgttatactcagtggcaa
ccagcccccatagagcttgcagaatcgcttgagcaattgcgtgcgcttcataagggcgaa
ggcattcacgtagagaccgcttgcgagccagtacccggtggcatcgatacacccgaagac
ttgcacagactgcggcaacagtttgctgatttgagcgtgagtactgcagcgactattaca
acgtcgactggtgagtaa
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