Carnobacterium viridans: LHA31_01730
Help
Entry
LHA31_01730 CDS
T08019
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
cvd
Carnobacterium viridans
Brite
KEGG Orthology (KO) [BR:
cvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cvd03110
]
LHA31_01730 (clpB)
Chaperones and folding catalysts [BR:
cvd03110
]
Heat shock proteins
HSP100
LHA31_01730 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
Clp_N
AAA_16
AAA_22
Sigma54_activat
ATPase_2
AAA_14
nSTAND3
TniB
RuvB_N
IstB_IS21
AAA_7
AAA_18
bpMoxR
NACHT
AAA_28
Zeta_toxin
Mg_chelatase
Roc
RNA_helicase
NBD_SMAX1
ResIII
Torsin
AAA_33
AAA_3
DUF815
DNA_pol3_delta2
TIP49
ABC_tran
AAA_19
DUF87
Exonuc_VII_L
ATG14
Motif
Other DBs
NCBI-ProteinID:
UDE95532
LinkDB
All DBs
Position
complement(360598..363210)
Genome browser
AA seq
870 aa
AA seq
DB search
MDIEKMTTTMQQTLGEAQSIAVTRKHQEIDLLHLWKVFLTPDHFARGLYQSLGIDTDDFE
FFVDQELDNYPTVEGSNVQYGQGMSQNLFRLLTEADTLRAEFQDDFLSTEIILLALMKLK
NHSLTKYLSKNGLTEKALKAEIEKIRGGDRVTSQNQEETYQALEKYGTDLVKAVRSGDQD
PVIGRDDEIRDVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPENLKGKTIF
SLDMGALIAGAKYRGEFEERLKAVLKEVKKSEGQIILFIDEIHTIVGAGKTEGSMDAGNL
LKPMLARGELHCIGATTLDEYRKYMETDKALERRFQKVLVDEPTVEETISILRGLKERFE
IHHSVNIHDNALVAAATLSNRYITDRFLPDKAIDLIDEACATIRVEMNSRPTELDQVSRR
LMQLEIEEAALKKEKDDASIRRLDIIQEELSNLREEANQLKMKWETEKEEVAKLRNKRAE
IEKARHELEEAESNYDLERAAVLRHGQIPALEKELKKLEEEQLAAQGNSIRLVQESVTDE
EIAVVIGRMTGIPVSRLVKGEREKLMHLDTSLSERVIGQDEAVQSVSDAVIRARAGIQDP
NRPLGSFLFLGPTGVGKTELAKALAENLFDSQDHMVRIDMSEYMEKHTVSRLIGAPPGYV
GYDEGGQLTEAVRRSPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRMVDFKNTVL
IMTSNIGSDLLLEGTDEQGQIKEATKEHVMSLLKTSFKPEFLNRIDDTILFAPLSIQVVK
KIVLKLVHNLSKRLAEQDIELTISNEAQIWIAEKAYDPMYGARPLKRFITKEVETPLAKG
IISGEIPPKSKVTITLKEDQLSYETVMLND
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggatatagaaaaaatgaccacaacaatgcagcaaactcttggtgaagctcaaagtatt
gccgtaacgagaaagcatcaagaaattgatcttctccatttatggaaagtgtttttgact
cctgaccattttgcacgtggactttatcaatctctcggaatcgatacagatgattttgaa
ttttttgtagaccaagaattagacaattatccaactgtggaaggctcaaatgttcaatat
ggacaaggaatgagccaaaatttatttcgattgctaacggaagctgatactttaagggct
gaatttcaagatgatttcctttcaaccgaaattattttgctagcacttatgaaattaaag
aaccacagcttgacaaagtatttaagcaaaaatggattaactgaaaaagcattaaaagct
gaaattgaaaaaataagaggaggagatcgcgtgacctcacaaaatcaagaagaaacttat
caagcacttgaaaaatatggaactgatttggttaaggcggtaagaagcggagaccaagat
ccagtcattggaagagatgatgaaattcgtgatgtgattcgtattttatctcgtaaaaca
aagaataaccctgtactgattggagaacccggtgttggtaaaacggccatagtagaaggg
ttggcacaacgaatcgttcgaaaagatgttcccgaaaacttaaaaggaaaaactattttt
tcattagatatgggcgcgttgatcgcaggagctaaataccgtggtgaatttgaagaacgg
ttaaaagcagtcttaaaagaagtgaaaaaaagcgaagggcaaatcatcttatttattgat
gagatccacactattgtaggtgcaggtaaaacagaaggcagcatggatgcaggaaatcta
ttgaagcctatgttagctcgtggcgaattgcactgtattggtgcaaccacactagatgaa
taccggaaatacatggaaacggataaagcgctggaaagacgcttccagaaagtactcgtt
gatgagccaactgtagaagaaaccatcagtattttaagaggactaaaggaacgttttgaa
attcaccatagtgtaaatatccatgacaatgctttagttgctgctgcaacgttatcgaac
cgctacattacggatcgttttttaccggataaagccattgatttaatagatgaagcttgt
gcaacgattcgagtggagatgaattcacgacctactgaattggatcaagtttcgcgtcgt
ttgatgcagctggaaatcgaagaagcagcgttgaaaaaagagaaagatgatgctagcatc
cgaagattagatatcattcaagaagaattatctaatcttcgtgaagaagccaatcagttg
aaaatgaaatgggaaactgaaaaagaagaagtcgctaaattgcgtaataaacgtgctgaa
attgaaaaagcgcgtcatgagttagaagaagctgaaagtaactatgacctagaacgtgcc
gctgttttaagacatgggcaaattcctgctttagaaaaagaattgaaaaagctggaagag
gaacaattagctgcccaaggcaattcaatcagacttgtgcaagaatcggtaacggatgaa
gaaattgctgtcgttattggtcggatgacgggtattcctgttagtagattagttaaggga
gaacgtgaaaaattaatgcacttagatacgtcattaagtgaacgcgttatcggtcaagat
gaagcggtacaaagtgtatcagatgcggttatccgggctcgagctggtatacaagatcct
aatcgtccgctaggttcattcctgtttctaggacctactggtgtagggaaaaccgaatta
gctaaagctttagccgaaaacttgtttgactcgcaagatcatatggtgcgaatcgatatg
agcgaatatatggaaaaacatactgtttcaagattgataggagcacctccaggttatgtt
ggatatgatgagggagggcaattgaccgaagcggtaagaagaagtccgtatactattgtc
ttgttagatgaaattgagaaagctcatccggatgtatttaatattttattacaggtatta
gatgatggacgcctaaccgattctaaaggcagaatggtcgattttaaaaataccgtttta
attatgacaagtaacattggttctgatttattgttggaaggcacggatgaacaaggacaa
ataaaagaagcgacaaaagaacatgtgatgtcattattaaaaacatcctttaaaccagag
ttcttaaatcgaatcgatgatacaattttatttgcaccacttagcatacaagttgtgaag
aagattgttctcaaattagtacacaatttgtcaaaacgtctagcagaacaagatattgaa
ctgactatttcaaatgaggcacaaatatggatagcggaaaaagcttatgatcctatgtat
ggtgcgagaccgttgaagagatttattactaaagaagtggagacacctttagctaaagga
atcatttctggagaaatcccaccaaaatctaaagtaacaattacactaaaagaggatcaa
ctatcttatgagacagtgatgttaaatgattaa
DBGET
integrated database retrieval system
