Carnobacterium viridans: LHA31_05845
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Entry
LHA31_05845 CDS
T08019
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cvd
Carnobacterium viridans
Pathway
cvd03030
DNA replication
cvd03430
Mismatch repair
cvd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cvd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LHA31_05845 (dnaX)
03430 Mismatch repair
LHA31_05845 (dnaX)
03440 Homologous recombination
LHA31_05845 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvd03032
]
LHA31_05845 (dnaX)
03400 DNA repair and recombination proteins [BR:
cvd03400
]
LHA31_05845 (dnaX)
Enzymes [BR:
cvd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LHA31_05845 (dnaX)
DNA replication proteins [BR:
cvd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LHA31_05845 (dnaX)
DNA repair and recombination proteins [BR:
cvd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LHA31_05845 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
AAA_5
RuvB_N
AAA_22
AAA_30
AAA_assoc_2
AAA_19
AAA_24
AAA_14
AAA_18
AAA_2
AAA_7
AAA_16
Mg_chelatase
TniB
Rad17
DUF815
T2SSE
TIP49
Sigma54_activat
PIF1
DUF6779
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
UDE96212
LinkDB
All DBs
Position
complement(1180552..1182369)
Genome browser
AA seq
605 aa
AA seq
DB search
MSYQALYRVWRPQRFQDIAGQKAITQTLRNALAQEKTSHAYLFTGPRGTGKTSAAKIFAK
AINCPNLKDGEPCNECDMCQSITQGQLNDVIEIDAASNNGVEEIRDIRDKAKYAPTSAEY
KVYIIDEVHMLTTGAFNALLKTLEEPPKNVIFILATTEPHKIPLTIISRTQRFDFKRISV
RDSCERMAYILGQEKIDYQEEALTVIARAAEGGMRDALSILDQAISYGDDSVTVENAMSV
TGSLTQELVLDYFDSIIQHNTEKGLSLLQSILAEGKDASRFVEDLILFSRDLLVYQQAPQ
MTDLLEGANVDEGFKSLSQTITAQQLYKVIELLNDTQQEIRFTNHAEVYLEVATVKLTQL
TDIQVSNNVSVEKTNGNELGQDEQQKMIDMEKELSQMRKQLKELAKNGNTPQPAKKAPKA
TAKPGNNQFKTNTTIIYKVLSEATKGNLAQLIDIWPDLLNMLSVTQRAIMKASTPVAASP
NGLIVSFEYDILCQKATNDNELLEAVREDLRRLVGYSPQMICVPSEQWPVIREQFLKQNK
ELLKNRPAEKVDSSATKKSNQTASDFEQENLNSLESALPEPDEEETIVTEAMQLFGEEIV
EVKND
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagcactttatcgagtatggcgtccacaacgatttcaagatattgctggg
caaaaagcgattacacaaacgttaagaaatgctttagcccaagagaaaacaagccatgct
tatctctttactgggccacgcggaacaggaaaaacgagtgcagcaaaaatttttgctaaa
gcaatcaattgccccaacttaaaagatggcgaaccttgtaatgagtgtgacatgtgtcag
tctattacacaaggtcagctaaatgatgtgattgagattgatgcggccagcaacaatgga
gtagaagaaattcgagatattcgggataaagctaaatacgctcccactagtgcagaatat
aaggtttatattattgatgaagtccatatgttaactactggagctttcaatgcgttatta
aaaacactagaagaaccgcctaaaaatgttatttttatattagctacaacagagcctcat
aaaattccattaactattatttctcgaacacagcgttttgatttcaaacggatcagtgtt
cgagatagttgcgaacgcatggcttatatcttaggccaagaaaaaatagattaccaagaa
gaggcgttaaccgtcattgctagagctgctgagggtggcatgcgagatgcattgagtata
ctagaccaagctatctcatatggagacgattcagtgaccgttgaaaatgcaatgagtgtg
actggaagtttgacgcaagaattagttttagattatttcgattctattattcaacacaat
acggaaaaaggattgtctcttttgcagagtatcttagcagaaggaaaagatgccagtcgt
tttgtagaggatttgattctatttagtcgagatttgttggtttatcaacaagctcctcag
atgactgatttactggaaggcgcaaatgttgatgaaggatttaaaagcctaagtcaaacg
attacagctcaacagctgtataaagtgattgaacttttaaatgatactcaacaagagata
cggtttacgaaccatgcagaagtttatttagaagttgctactgtaaaattgacccaatta
acggatattcaagtatcaaacaatgtgtcagttgaaaaaacaaatggcaatgaactcggg
caagatgagcagcaaaaaatgatagatatggaaaaagaactcagtcaaatgaggaaacaa
cttaaagaactggctaagaatggcaatacgcctcaaccagcaaagaaagcgcctaaagcg
actgccaaacctggaaataatcaatttaaaacaaatacaacaattatctacaaagtattg
agtgaagccacaaagggaaatttagcacagttgattgatatttggcctgatttattaaat
atgctatctgtcactcaaagagccataatgaaagcttctacaccagttgcagcgagtcct
aatggcttgattgtttcatttgaatatgatattttgtgtcaaaaggccactaatgataat
gaattgcttgaagccgtgagagaagatttaagacggttagtgggctattctccacagatg
atctgtgttccatcagaacaatggcccgttattcgagaacaattcttaaagcaaaataaa
gagttgttgaagaatcgtccagctgaaaaagtcgattcttctgctactaaaaagtctaac
caaacggcctcagattttgagcaagagaatttgaatagcttagagtcggccttgcctgag
cctgatgaggaagaaacgattgttacggaagctatgcagttatttggagaagaaatagtt
gaagtgaaaaatgattaa
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