Cebidichthys violaceus (monkeyface prickleback): 137867185
Help
Entry
137867185 CDS
T10484
Symbol
kdm2ba
Name
(RefSeq) lysine (K)-specific demethylase 2Ba isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
137867185 (kdm2ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cve03000
]
137867185 (kdm2ba)
04121 Ubiquitin system [BR:
cve04121
]
137867185 (kdm2ba)
03036 Chromosome and associated proteins [BR:
cve03036
]
137867185 (kdm2ba)
Enzymes [BR:
cve01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
137867185 (kdm2ba)
Transcription factors [BR:
cve03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
137867185 (kdm2ba)
Ubiquitin system [BR:
cve04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
137867185 (kdm2ba)
Chromosome and associated proteins [BR:
cve03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
137867185 (kdm2ba)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
137867185 (kdm2ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
F-box
DUF7885
PHD
LRR_4
Motif
Other DBs
NCBI-GeneID:
137867185
NCBI-ProteinID:
XP_068559747
LinkDB
All DBs
Position
Unknown
AA seq
784 aa
AA seq
DB search
MALSLSGDDEEYDSESEQQRAANRPKPKVGTSSSSAVKLPSNRSSSGARRRRTRCRKCEA
CLRTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCVVCKEAGKEDTLEEEE
DKFNFMLMECSICNEIVHPNCLKVSEASGVVNDELPNCWECPKCNHAGKSGKVLKQKRGP
GFKYASNLPGSLLREQKPVKEEGGDVSSAAKRRPDREETPRYRPEESLHRQPPLLSPSNL
PRARPEDKLRKKRKLFDDDEEEDLSVRKKEKSDDPYFSKLLHQIKTEEEDEDAYYEEEDE
EGRGLHFRGLVERKGHFGDTEEEGDERDSKNALLNPCIKTPVGDSDQSLCSSPQAGPSSE
GGSETQEKGPCPKARRKRRLPNRELSRELSKALNQEIQKTEDCLANENRQPLKVEPETEN
EEPKRLFRNGSELGDQRPHLKTKEMNGTPWELRHFYPSQITPLGFNRSTPTNRPVPPHSP
PKCVQMERHVIRPPPISPPPDRLPLKDGKTHMIQREVWMKIFGYLTHQELCVCMRVCKTW
NRWCCDKRLWTKIDLNRCTSITPLMLSGIIRRQPLSLDLSWTNISKKQLSWLINRLPGLR
VLRLSGCSWAAVSALCTSSCPLLRTLDVQWVEGLKDPQMRDLLSPPTDNRPGQLDNRCKL
RNVEDLRLAGLDITDTSLRLISRQMPSLSMLDLSYCNHINDQSVNLLTAAGTTTRDSLTD
INLSVCNRVTDHSLNFFKRCGSICQIDLRFCKQVTKTACERFIAEMSVSVPFRLKEDKLL
QKTS
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggccttgtcattgagcggagacgatgaggaatatgattcagagtctgagcagcagcga
gcggccaaccggccgaagcctaaggtggggacatcgtcatcgtcggccgtgaagctgccg
tccaatcgcagctcatccggagcgagacgccggaggacacgatgtcggaagtgcgaagcg
tgcctccggaccgagtgtggagaatgtcacttctgcaaggacatgaagaagtttggaggg
ccggggcgcatgaagcagtcgtgcattatgagacagtgcattgcgccggttctgcctcac
acagcggtgtgtgtggtgtgtaaagaggcggggaaagaggacacgctggaggaagaggag
gacaagttcaacttcatgctgatggagtgctccatctgcaacgagatcgtccatcccaac
tgtctcaaggtgagcgaagcctcgggagtggtgaacgatgaacttcctaactgctgggaa
tgtcccaaatgcaaccatgctgggaaaagtggaaaagtattgaagcaaaaaaggggtccg
gggttcaagtacgcctccaacctccctggctctctgctgagggagcagaagcctgtgaag
gaggaggggggggacgtttcttctgcagccaagaggagaccagacagagaggagacgccc
aggtacagacccgaggagtctctccaccgacagccaccgctgctctctcccagcaacctg
ccccgggccaggcctgaggacaagctgaggaagaagaggaagctgtttgatgacgatgag
gaagaggatctcagtgtgaggaagaaggaaaagtcagatgatccttatttttccaaactt
ctacaccaaatcaagacagaggaggaggacgaagatgcttattatgaggaggaggatgaa
gaaggaagggggcttcacttccggggccttgtagagaggaaagggcattttggagacact
gaagaagaaggggatgaaagggactccaagaatgcacttttgaatccctgcattaaaaca
cccgttggagacagcgaccagtccctctgcagctctccgcaggccggccccagcagcgag
ggcgggagtgagacccaggaaaaagggccgtgtcctaaagctcgccgcaagcgccgatta
cccaacagagagctgagccgggagctgagcaaagcactgaaccaggaaatccagaagacg
gaggactgcctggccaacgagaaccgccaacctctcaaggtggagccggagacggagaac
gaggagcccaagaggttgttccgcaacggcagtgaactcggggaccagaggccccacctc
aagaccaaagagatgaacgggaccccctgggagctgcgccacttctacccgagtcagatc
actccactgggcttcaaccggagcaccccgaccaaccggccggtacccccacactcccca
cccaagtgtgtccaaatggagcggcacgtcatccggccccctccgatcagcccgcctccc
gaccgacttcctctaaaagacggtaaaacacacatgatacagcgcgaggtctggatgaag
atctttggctatctcacgcaccaggagctgtgtgtctgcatgagagtttgcaagacgtgg
aacagatggtgttgtgataagagactttggacgaagattgatctgaaccgctgcacctcc
atcactccactcatgctaagtgggattatccgccgacagccgctttctctggatctcagt
tggaccaacatttccaagaaacaattaagctggctcattaatagattgccaggtttgcga
gtgttgcggttatcggggtgttcttgggctgctgtgtctgcgctctgcacctccagctgc
cctctgctgcgcaccttggatgtccagtgggtggagggcctgaaagacccacagatgagg
gacctcctttcaccccccacagacaacagaccaggtcagttggataaccgttgcaagctg
cggaatgtggaggacctgcggctcgcggggctcgacatcaccgacacgtctttacgtctc
atcagtcggcagatgccctctctgtccatgctggacctgagctactgcaaccacatcaac
gaccagtcagtcaacctgctgacagcagcagggaccacgaccagagactccctcacagat
atcaacctgtcagtttgtaaccgagtcacagatcattccctaaacttttttaagcgctgt
ggaagcatctgtcagatcgaccttcgcttctgcaagcaggtgaccaagacggcctgcgaa
cggttcatcgcagagatgtctgtcagcgtaccgttcagactgaaagaggacaaactgctg
cagaagaccagctag
DBGET
integrated database retrieval system
