Cebidichthys violaceus (monkeyface prickleback): 137875538
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Entry
137875538 CDS
T10484
Symbol
kdm2ab
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
137875538 (kdm2ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cve03000
]
137875538 (kdm2ab)
04121 Ubiquitin system [BR:
cve04121
]
137875538 (kdm2ab)
03036 Chromosome and associated proteins [BR:
cve03036
]
137875538 (kdm2ab)
Enzymes [BR:
cve01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
137875538 (kdm2ab)
Transcription factors [BR:
cve03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
137875538 (kdm2ab)
Ubiquitin system [BR:
cve04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
137875538 (kdm2ab)
Chromosome and associated proteins [BR:
cve03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
137875538 (kdm2ab)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
137875538 (kdm2ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
JmjC
F-box
LRR_6
DUF7885
Cupin_8
C1_1
Cupin_1
LRR_4
Motif
Other DBs
NCBI-GeneID:
137875538
NCBI-ProteinID:
XP_068570986
LinkDB
All DBs
Position
Unknown
AA seq
1307 aa
AA seq
DB search
MEDPHTRYSKRLRTGTRRRYQDDGISDDEIEGKRMFDLDEKLQCVRFKSDLVKHMEGKDF
TFEYIQREGLRDPIIFDTADGLGIQMPDPDFSVSDVKLFVGSRRIVDVMDVNTQKGIEMS
MAQWRRYYETPPSEREKLYNVISLEFSHTRLENLVKRPASVDLIDWVDNMWPRHLKERQR
DSTNAIIDMHYPKVQKYCLMSVQGCFTDFHIDFGGTSVWYHILRGGKVFWLIPPTPPNLE
MYENWVLSGKQGDIFLGDKCYDCQRIELKQGNTFIIPSGWIHAVYTPEDTLVFGGNFLHS
FNIPMQLNIYSIEDRTRVPAKFRYPFYFEMCWYVLERYLYCQTNVSHLTPEFQKYSLGIG
LTQTDLETNDQTKNGTSDGVECDTVIKEVIIKAEVEEEETAEVTTPQQMLTPFELEGLWN
LLGKLEELPDQKKCVPAGIMDAAALIEDMRTLLKGHSNDNPKLSYTGEPIVKWPERPSWY
QPPTPPPPVIYRPRLGPTLHKPLGQRPTKRSSISALRRRRVRCKRCSACCRKECGTCQFC
HDMRKFGGPGRMKKGCIMRRCLMPALPNTARCAICGEGELDESNPSTYSLMECSVCSQIV
HHQCIKEPGEGKINKDLPSCWECPKCYQGKDLESSSDEESEESEGSTSLPPSKLAYREGI
GVGEGVRRGTLSRSSSRSTAPPPSQKLLLQHQQNRKRANALELRLKKRIKLERSKILSKQ
SSLERSPRLLRSRVLSRLRSPTSRLSQGRGRGSSWASGSSYHSSSGGTGSFQQQSSLGLA
FEPKGESRRGRGRGVRLRGGGAGRGIRGGRSHEELEEESEDSSSSSSSTNSSSTNSSSSD
DDNEEEETGRNIGRGLDKENQPQSRRGRRAAKEREEEASEVANQNGAEEDDEEEAEQDSE
TRGKDGSFLKVTLQRPTRAKHDPSAIVPKLEAIAPQTATSTIHNQTRVLVRPPIRSRGPC
PDQLPSRHTPPHTRSRHTDTRTSHPERLEDSKKTRPSRPAKLSNGASSSSTSELPHLRIP
LSALQEGGSEADRENSGSGPGCEREVWVSVFRYLSRADLCVCMAVCKNWYKWCLDKRLWA
RIDLSIKRTVTPQALTGIIKRQPVTLDLSWTNISKKQLNWLVGRLPGLKDLMVAGCSWLT
ISALCSSGCPLLRSLDLRYADGVKDSQIRDLVTPPGCDNRSQFRTMQCLRLAGLDISDST
LRLVIRHMPHLTKLDLSHCNSLTDHSINLLTAVGSSTRNTLTELNLGGCSKLTDTSLKYL
RRLSCISLLDLRGCKGVSRKACESFISELSVNTLYCLSDEKLIQRIS
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccctcatacacggtacagcaaacgcctgcgtacagggacgcggcgccgctac
caggacgatggaatctcagatgatgagattgaaggcaaacggatgttcgacctggacgag
aagttgcagtgtgtcaggtttaagtctgacttggtcaaacacatggagggtaaagatttc
acatttgagtacatccagagggaagggctcagggaccccattatctttgacacagctgat
ggcctcggcatacaaatgccagaccctgatttcagtgtgagtgatgtcaagttgtttgtt
ggtagtcgacgcattgtggatgtgatggacgtgaacacccagaagggaatcgagatgtcg
atggctcagtggcgacgctactatgaaacgccaccatctgaaagagagaaactgtacaac
gtcatcagtctggagttcagccacaccaggctggagaatctggtcaaacggccggcgtcg
gtggacctgattgactgggtggacaacatgtggccccgccatctcaaggagagacagaga
gactccactaatgctatcatagacatgcattatcccaaagtacagaagtactgtctcatg
agtgtgcagggctgcttcacagacttccacattgactttggaggcacttcagtgtggtac
cacatcctgcgaggaggaaaggtgttctggctgattccacccacaccaccgaacctggag
atgtacgagaactgggttttatcaggaaaacaaggggacatcttcttgggggacaagtgt
tacgactgtcagaggatcgagctcaagcaaggcaacaccttcataatcccgtcagggtgg
atccatgccgtgtacacaccagaggacacgctggtgtttgggggaaatttcctccacagc
tttaacatccccatgcagctcaacatctacagcattgaggatcgcacacgggtgccagca
aagttccgctacccattctactttgagatgtgctggtacgtcctggagagatacctctac
tgtcagaccaacgtctcccacctcactcctgagttccagaaatactccctaggcatagga
ctgacacagactgaccttgaaaccaatgatcaaaccaagaatggcacctctgatggagtt
gaatgtgacactgtaatcaaggaggtcataatcaaggcagaagtggaagaagaagagaca
gctgaagttaccacacctcagcagatgctgactccctttgagctggagggactgtggaac
ctcttagggaagctggaggagctgccggaccagaagaagtgtgttcctgcaggcatcatg
gatgctgcagccctgattgaagacatgaggactcttctgaaagggcattccaatgataac
cccaagttgtcctacactggagagcccattgtcaagtggcccgaaaggccgtcatggtac
cagccccccactccccctccccccgtcatttaccgtcctcgcttgggacccaccctccac
aagcctctgggtcagaggcccaccaaacgctcctccatctcggccctgaggcgcaggcgg
gtgaggtgtaagcgctgctccgcctgctgcaggaaggagtgcggcacctgccagttctgc
cacgacatgaggaagttcggtggccctggacgcatgaagaagggctgcatcatgagacgg
tgtctaatgcctgccttaccgaacacagcgcgatgtgccatatgtggagaaggggagttg
gacgaatcgaatccgagcacttactcgctcatggagtgctccgtctgctcgcagattgtc
catcatcaatgcattaaggaacccggtgaagggaagatcaataaagatttgcccagctgc
tgggaatgtcccaaatgttaccaaggcaaagacttggagtcttccagcgatgaggaaagc
gaagagtcggagggctccacctccttgccaccgtccaagctcgcctaccgggaaggcatc
ggtgtaggtgaaggggtgaggcgagggacactgagcagatcctcatcccgatccacagca
ccaccaccttctcagaaacttctactgcagcatcagcagaaccgcaaaagagcaaatgca
ctggagctcagacttaagaagaggataaaactagagcgcagcaaaatcctatcgaaacag
tcgtctctggagcgctctcccaggctgctgcgctccagggtgctgtcccggctgcgctct
ccaaccagcagactatctcagggccgaggtcggggctcctcctgggcgagtggctcctct
taccacagctcttcaggagggaccggttccttccagcagcagtcttcccttggtctggca
tttgagcccaaaggagagtcccgcagagggagggggagaggggtgaggctgcggggagga
ggagcaggaagaggaatccgaggtggtagaagccatgaagagttggaggaggaaagcgag
gacagcagcagcagcagcagcagcaccaacagcagcagcaccaacagcagcagcagcgat
gatgacaacgaggaagaagagacagggcggaacattgggaggggattggataaagagaac
cagccacagtcgaggcgaggacgacgggcagccaaagagagggaagaggaagcgagcgag
gtggccaaccaaaacggcgcagaggaggatgacgaggaggaggcggagcaggacagtgaa
acgaggggcaaagatggctcatttcttaaagtgacactccaaaggccaaccagagccaaa
cacgacccgtcagccattgtccccaaattagaagctatcgcccctcaaaccgccacttcc
acaatacacaaccagaccagagtcctcgtcagaccccccattagaagccgcggtccctgt
cccgatcaactccccagtaggcacacacctcctcacactcgtagtagacacacggacact
cgcacctcccacccagagaggctggaggactctaaaaaaacgaggccaagcagacctgct
aaattgagcaatggcgcctcctcttcttcgacctctgagcttccccatctccgcatccct
ctgtccgccctgcaggaaggagggagcgaggccgaccgggagaacagtggcagcggacca
ggctgcgagagggaggtgtgggtatccgtcttccgttacttaagtcgagccgatctctgc
gtctgcatggctgtctgcaagaactggtacaaatggtgtttagacaagcggctttgggca
cggattgacctgagcatcaaacgcaccgttacccctcaggccctaaccggcatcatcaag
agacagccggtcacgctggatctgtcctggaccaacatctctaaaaaacagctcaactgg
ctcgttggccgcctgcctgggctgaaggatctgatggtggcaggttgttcctggttaact
atttcagctctctgctcctctggttgccctctcctccggtctctggatctgcggtatgca
gacggcgtcaaagactctcagatcagggatctagtcacccctccaggttgtgacaatcgc
agtcagtttcggaccatgcagtgtttgcgactagcaggcctggacatcagcgactccact
ctgcgcctggtgatccgccacatgccccatttaacaaaactggacctctcccactgcaac
agcctcaccgaccactccatcaacctgctgaccgcagtgggctcgtccacacgaaacacg
ctcacagaactcaacctgggaggttgcagtaaactgactgacactagtcttaagtatctc
cgccgcctctcttgcatctcactgctcgacctgcgaggctgtaaaggcgtctcccgcaag
gcctgcgagtccttcatctccgagctgtcggtcaacacactctactgcctgtcggatgaa
aaactgatacagaggatttcctaa
DBGET
integrated database retrieval system
