Cebidichthys violaceus (monkeyface prickleback): 137877781
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Entry
137877781 CDS
T10484
Symbol
col9a1b
Name
(RefSeq) collagen, type IX, alpha 1b
KO
K08131
collagen type IX alpha
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve04510
Focal adhesion
cve04512
ECM-receptor interaction
cve04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137877781 (col9a1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137877781 (col9a1b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
137877781 (col9a1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cve00535
]
137877781 (col9a1b)
Proteoglycans [BR:
cve00535
]
Extracellular matrix (ECM) proteoglycans
Others
137877781 (col9a1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
137877781
NCBI-ProteinID:
XP_068573988
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MARAPSVRGSLLGLLLQLVLICSAQRSQGPAGPPGPAGVPGIDGIAGERGEDGEEGLHGP
DGDAGKPGSSGLPGIPGNDGLTGPVGEAGPDGPPGQKGEPGKSGPRGATGVGPDGPPGPP
GPGGLLGEVGKVGVLGSIGVRGPQGPRGPTGARGAAGMQGSADLCPNACPPGTSGHPGLP
GMKGHKGVKGEAGEPGKQGHKGEEGDQGSLGEVGSQGPMGPQGIRGAMGMMGPKGEMGAR
GLDGDPGPQGVAGATGDHGQRGVMGELGPKGETGILGQRGITGVPGPKGGVGLSGVDGRE
GIPGMPGAKGGIGKSGVPGEVGLQGLPGLPGAPGPKGLSGLKGDAGQAGLPGTMGPAGKA
GERGEQGELGPIGPIGEPGAVGEQGPIGSAGKPGARGPKGDPGLPGLPGPSGLPGVKGER
GERGEGGPKGEQGTQGDEGNPGDKGDHGEPGESGSKGEVGNLGEVGNRGPEGSRGQPGIE
GPPGTPGPRGMQGNRGPPGVRGSQGPAGKEPSDQHIKQVCMRVMQEQLAQLAASLRRPET
GVAGLPGKPGPPGQPGPPGDNGFPGQGGSRGLPGLKGPSGSIGTKGPKGEMGDRGSRGPT
ARGPKGQPGPPGLPGEPGKPGYGQDGRDGQRGPPGVPGQSGVPGPPGAAGPNGYCDPSSC
NLQAGAAHQSLDVKGPAGN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggctcgggcccccagcgttagagggtcacttttgggtctgcttctgcagcttgtcctt
atctgctccgctcaaaggagccaaggacctgctggccctcctggacctgcaggtgtccca
ggaattgatggcattgctggggaaaggggagaagatggcgaggagggacttcatggacct
gatggagatgcaggtaaacccggctcttcgggattacctggaattcctggaaatgacggt
ttgaccggccctgttggagaagctgggcccgacggtccccccggacagaaaggcgaacct
ggaaaatctggacctcgtggagccactggtgttgggcctgatggaccccccggaccaccc
gggcctggaggacttctgggtgaagtgggaaaagttggagtacttgggtccataggtgtg
agagggccacagggaccccgtggaccaacgggggccagaggtgcagctggaatgcaaggc
agtgctgacctgtgtccaaacgcttgtccacctgggacctcgggacatcctggccttcct
ggcatgaagggtcacaaaggtgtaaaaggtgaagcgggagaacctgggaaacaagggcac
aagggtgaggagggagaccagggaagtcttggagaggtcggatctcaaggaccaatgggc
cctcagggaattcgtggagccatgggaatgatgggccccaagggagaaatgggagctcga
ggtcttgatggagatccaggtccccagggtgttgcaggggcaactggggatcatggccag
agaggcgtgatgggcgagcttgggcctaaaggtgaaacgggtattctagggcagagagga
atcacaggtgttccaggtcccaagggaggagttggcttgtcgggtgtggacggtcgcgag
ggtattcctgggatgcctggagcaaagggaggcattgggaagtcaggcgttcctggagag
gtcggacttcaggggcttccaggtttgcctggtgcacctggaccaaaaggcttgagtggc
cttaagggagacgctggtcaagcaggcctccctggaacaatgggacctgccggcaaagca
ggtgagcgcggagaacagggagagctaggacctatcggaccgattggtgaacctggagct
gtaggagaacaaggccctataggttcagctggcaagccaggtgccaggggacccaaaggt
gaccctggccttcccggtctccctggtccttctggcttgcccggggtgaagggagagagg
ggagaacgtggagagggaggacccaaaggagaacagggaacacaaggggatgagggaaac
cctggagacaaaggggatcatggtgagccaggagaatctggatctaaaggagaggtcggt
aacctcggcgaagttggcaatagaggtcccgagggaagtcgaggccagccgggaatcgag
gggccgcctggcacacctggaccgaggggcatgcaggggaacaggggtccacctggagtc
agagggtcccagggccctgcgggtaaagagccaagtgatcagcacatcaaacaagtttgc
atgcgagtcatgcaagaacagctggcccagttagctgctagtttaaggaggccagagact
ggcgtagctggtttacctggaaaacctggacctccagggcaacctggtcctccgggagac
aatggtttccctgggcagggtggatcaagaggccttccaggacttaaagggccatcggga
tctattggaacgaaaggacccaaaggtgaaatgggagacagaggctccagggggcccact
gcgcgaggacctaaaggtcagccaggacctcccggacttcctggtgagccaggcaaacct
ggctacggccaggatggtcgggacgggcagaggggacctcctggcgttcccggacagtcc
ggtgtacctgggcctcccggtgcagccggtcccaatggttactgcgacccgtcatcttgc
aacctccaggcaggggccgcccaccagtctctggatgtgaagggacctgcagggaactaa
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