Cebidichthys violaceus (monkeyface prickleback): 137880598
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Entry
137880598 CDS
T10484
Symbol
sdc4
Name
(RefSeq) syndecan-4 isoform X1
KO
K16338
syndecan 4
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve04512
ECM-receptor interaction
cve04514
Cell adhesion molecule (CAM) interaction
cve04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137880598 (sdc4)
04514 Cell adhesion molecule (CAM) interaction
137880598 (sdc4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
137880598 (sdc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cve00535
]
137880598 (sdc4)
Proteoglycans [BR:
cve00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
137880598 (sdc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Glycophorin_A
Dsc3_C
Motif
Other DBs
NCBI-GeneID:
137880598
NCBI-ProteinID:
XP_068578132
LinkDB
All DBs
Position
Unknown
AA seq
225 aa
AA seq
DB search
MLNICLVLILSASVLSESQVRETETWMPMKTTQTVDMSTRREHLEASGDSVNGSDFGFTD
DNEDDDEDEDEDYYSDPTYDDEDEDEDDEFSGSGDGETTVSPVRDSKPSVKPEVNDNKIP
ELERPVRPTVDQVDLVQNRNEIQVTEEEDEEAEPSNVLMSHASEDSVFNKTEVLAALIAG
GAVGLMFAVLLILLLIYRMKKKDEGSYELGKKPIYKKAPTTEIYA
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacatctgcctcgtgttgattttatccgcctccgttctttccgagtcgcaggtg
agggagacggagacatggatgcccatgaagaccacgcagacggtggacatgtcgacgcgc
cgtgaacacctggaggcatcgggagactcggtcaacggctccgacttcggcttcacggac
gacaacgaagacgacgatgaagacgaggacgaagactactactccgacccgacgtacgac
gacgaggacgaagacgaggacgacgagttctccggatctggtgacggagaaacaaccgtg
tctcctgttagagactcaaagccgtccgttaagcctgaagtcaacgacaacaagatccca
gagctggagcgcccggtgcggccgaccgtggaccaggtggacctggtccagaaccgcaac
gaaatccaagtgacagaggaggaggatgaggaggcggagccgtccaacgtcctcatgtcc
cacgccagtgaagacagcgtctttaacaagacggaggtcctcgcagctctgatcgcaggc
ggtgccgtcggcctgatgttcgccgtgctcctcatcctcctcctcatctaccgcatgaag
aagaaggacgagggcagctatgagctggggaagaaacccatctacaagaaagcccccacc
acggagatctacgcatag
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