Cebidichthys violaceus (monkeyface prickleback): 137885305
Help
Entry
137885305 CDS
T10484
Symbol
col9a1a
Name
(RefSeq) collagen, type IX, alpha 1a
KO
K08131
collagen type IX alpha
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve04510
Focal adhesion
cve04512
ECM-receptor interaction
cve04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137885305 (col9a1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137885305 (col9a1a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
137885305 (col9a1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cve00535
]
137885305 (col9a1a)
Proteoglycans [BR:
cve00535
]
Extracellular matrix (ECM) proteoglycans
Others
137885305 (col9a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
137885305
NCBI-ProteinID:
XP_068583621
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MALSRICRESLLVILLQMMLICSAQRGPVGPRGPQGPIGVAGVPGVDGIDGDRGEDSTVN
GGPGPDGDNGRNGTAGAAGLPGAEGPVGPPGDPGPVGLKGPKGDSGPRGPTGEPGVGPDG
LDGIPGTDGLPGELGKVGQPGARGKRGQVGLPGAAGPRGPPGVYQGEDLCPNACPAGLNG
HSGLPGMKGHKGVKGESGEPGRQGHKGEEGEQGLPGEVGAQGLPGQGGPRGLQGITGSKG
DRGPRGKPGDGGPRGIQGGPGDVGQRGAIGEPGPAGVLGDQGPSGIKGVPGPKGEPGLAG
PDAREGIPGLPGSKGLTAKNGSPGDAGPQGLPGLPGAYGQKGVSGAAGTTGDPGIVGVMG
SPGKQGERGDQGEVGPVGARGGPGGRGERGPDGPLGSPGPRGGKGNPGLPGLPGPAGYHG
QKGDRGAVGLDGPKGDQGSAGAEGTAGDAGELGDQGEPGEKGSTGPPGETGNKGSEGGRG
QQGKEGKLGQPGPRGMQGDMGVPGLPGPQGPAGKSPTDTHIKQVCMRVMHEQLAQLAASL
SRPESGISGIPGPPGPPGPPGPSGENGFPGHTGSRGLPGLKGPAGLLGRKGPKGDMGDRG
DRGPTARGPKGAPGAPGQPGEAGRAAYGSDGRDGERGPRGVPGVPGVPGPPGTAGVNGYC
ESSQCVLPMVASPVSAKDSGMKGPGDM
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggctctctctaggatctgtcgggagtctttgctggtgattttgctgcagatgatgctg
atttgctcggctcagaggggcccggtcggtcccagaggcccccaggggccgatcggagta
gcaggcgtgcccggagtggacggcattgatggcgacagaggagaagactccacagtgaac
ggaggaccgggtcctgatggtgacaacggcagaaacggaactgcaggagctgcaggcctt
ccgggcgcagaaggacctgttggacctcctggagatccaggcccagtgggcctcaaagga
ccaaaaggagattctgggccacgtgggcctactggagaaccgggtgtaggacctgacggg
ctggatggcatcccgggtacagacgggctaccaggtgaactgggcaaagttggacaacct
ggagcaagaggcaagagaggtcaagtgggtcttcctggtgctgctgggccgcggggtcct
ccgggtgtgtatcagggcgaggacctgtgtcccaacgcctgtcccgccggactcaacgga
cattctggtctccccggcatgaaaggccacaagggggttaaaggggaatccggtgagccc
ggaagacaaggacacaagggagaggaaggcgaacagggactgccgggtgaagtcggagct
caaggactaccaggccaaggtggaccaagaggtctccaaggaataaccggctccaaagga
gacaggggacctcgtgggaaaccaggtgacggaggtcctcgtgggatccagggaggccca
ggcgacgtgggtcaaagaggagccataggtgagcccggaccagcgggagtgctgggggat
caaggtccgtcgggaatcaaaggagtgccagggccaaaaggagagcctggcctcgctggt
ccagatgcccgtgaggggatacctggtctgccaggatccaagggtcttacagctaaaaat
gggtctccaggtgatgctggcccacaaggacttcctggtttgccaggcgcttacggacaa
aaaggagtcagcggtgcagcgggtaccacgggtgatcccggcattgtaggagtgatgggg
tctccggggaaacaaggcgagcgaggcgaccagggagaagtgggaccagtcggagcccga
ggaggaccaggtggacgaggagagagagggcctgacgggccactaggatcaccaggaccc
aggggaggcaaagggaacccaggccttcccggacttcctggccctgctggttatcatggc
cagaagggcgacaggggagcagtcggcctcgatggtccaaaaggagaccagggatctgca
ggtgctgaaggaacagcaggagatgccggagaactgggcgatcaaggagaaccaggagag
aaaggatcgacgggcccgccgggagagacggggaataaaggatctgagggcggcagaggt
cagcaggggaaagagggcaagctgggccaaccgggaccgcgcggcatgcagggcgacatg
ggagtaccaggcctgccggggccgcagggaccagcgggaaaatcaccgacagatacgcac
atcaagcaggtctgcatgagagtgatgcatgagcagctggcccagctagcagctagcctg
agcaggcccgagtccggcatctccggaatacccggaccccccggcccacctggacctccg
ggcccctccggagagaacggtttccccggacacaccggatctcgaggactgcccggtctg
aagggtccagctgggctattgggtcgcaaaggacccaaaggggacatgggggacagaggg
gacagaggacccacagcgagaggacccaaaggagcgccaggtgcccccggtcaaccaggt
gaagccgggcgagcggcctacggctcggacggccgtgacggagagcgggggccccgcggc
gtccccggtgtccccggtgtccccgggcctcccggcaccgccggcgtgaacggctactgc
gagtcgtcacagtgcgtcctccctatggtggcgtcaccggtttccgcaaaggactccggc
atgaagggccccggtgacatgtga
DBGET
integrated database retrieval system
