Cebidichthys violaceus (monkeyface prickleback): 137886957
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Entry
137886957 CDS
T10484
Symbol
col9a3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve04510
Focal adhesion
cve04512
ECM-receptor interaction
cve04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137886957 (col9a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137886957 (col9a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
137886957 (col9a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cve00535
]
137886957 (col9a3)
Proteoglycans [BR:
cve00535
]
Extracellular matrix (ECM) proteoglycans
Others
137886957 (col9a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
137886957
NCBI-ProteinID:
XP_068585788
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MAVFSALWVLLLCQLLTSSSAQRPGPRGAPGPQGPAGLPGKDGTDGKPGPAGLPGKIGPK
GKSGIPGGAGKPGLPGLPGVDGLTGPDGPAGKDGPSGETGDAGPAGPAGPPGRGRTGAAG
LPGTNGLPGGVGPRGSAGAEGLSGLPGPSGADGPPGLPGTLQDLSGDLLCPAICPPGPSG
PSGMPGFKGHTGHKGDKGELGKNGEKGDAGPSGPPGIPGTVGLQGPRGLRGLQGTMGSVG
DRGLPGFRGKHGIAGVIGKTGDAGEKGPQGFRGPKGGIGKIGPKGGPGGAGPKGEPGIPG
RDGKDGTPGLDGEKGDAGRHGVVGEKGPNGLPGLQGKAGTKGHKGQVGDPGKDGETGPYG
EPGIPGDVGVPGERGLAGPRGVAGGIGPTGIAGPQGVKGFQGVTGALGDPGLPGPTGIRG
EFGERGPVGAYGAKGDMGVAGSDGLPGENGEPGPFGPVGQKGAEGKRGELGPKGVTGPQG
ELGARGLPGKTGVMGFQGEQGMPGIAGKTGVPGKLTSEQHIRELCGSMIDDQIAQLAANL
RRPLAPGMVGRPGPAGTPGKTGVAGSFGHPGQRGPPGYRGLPGELGDPGPRGNVGEQGDK
GSIGKAVDGPTGDQGYQGLPGVPGIVKDGRDGSPGDPGEPGESGRVGRTGHQGPPGICDT
TACQGASPAGKSSNPKNH
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgttctctgcgctttgggtgctcttactgtgccagcttttgacatcatcctct
gcccagaggccgggccccagaggagctcctgggccccaaggacccgcagggctaccggga
aaggatggcactgatggcaaacctggacctgctggactaccggggaaaataggtcccaaa
gggaaatcaggaataccagggggagcaggaaaaccaggcctgccaggacttccaggggtg
gacgggttgacgggtcccgatggtcccgctgggaaggatggaccctcgggggaaacgggt
gacgctggacctgccgggccagctggacctcctggcagagggagaacaggagctgcagga
ctacccggaaccaacgggttgccaggcggagtcggaccacgaggttcagcgggtgctgag
ggtctttcaggacttcccggaccttccggcgctgacggaccgccgggtcttcctgggacc
cttcaggatctcagcggggaccttctgtgtcccgctatctgtccccctggtccctctggt
ccttccgggatgccgggattcaagggtcacacgggacataaaggagacaagggagagctt
ggaaaaaatggagagaagggcgacgctggtccatccggcccaccgggtattcctgggact
gtgggtctgcagggcccacgcggtctcagaggtttacaaggcacaatgggatccgtagga
gacagaggcctgcctggtttcagaggcaaacatggcatcgctggcgtcattggaaagaca
ggcgacgcgggagaaaaaggaccgcagggattcagaggacccaaaggaggaattggcaaa
attggccccaaaggaggtcccggaggagctggacccaaaggggagcctggaatccccggc
agagacggcaaagatgggacgccaggattagatggcgagaagggtgatgctggacgccac
ggagtagtcggagagaaaggaccaaacggacttcctggtctacaaggaaaggctggcacg
aaggggcataaaggacaagttggtgatccagggaaggatggggagacaggaccctatgga
gagccaggtattcctggcgatgtcggcgtcccgggagagagggggctagccgggcccaga
ggagtggctggaggcatcgggccgacgggcatcgccggacctcagggagtcaaaggcttc
cagggggtaactggagccttgggggatccaggtcttccgggtccaacaggtatccgtgga
gagtttggtgaaaggggtcccgttggagcttatggagctaaaggagacatgggcgtggca
ggaagtgacggcctaccaggagagaacggagaacctggtccttttggtccagtcggacaa
aaaggagcggaaggaaagcggggtgaacttggacctaagggcgtgacgggtccacaagga
gagcttggggcgagaggacttccaggaaaaacaggagtaatgggcttccaaggggagcag
ggcatgcctggaattgcaggaaagacaggtgtacctggtaaactgacgagcgagcagcac
atcagagagctgtgtggctcaatgatcgatgaccagattgcacagctggcggctaacctc
cggagacccctggcccccgggatggtgggccgccccggccccgcggggactccgggaaag
acgggagtcgccggctctttcgggcatccaggtcaacgtggaccgccagggtacagaggc
ctgccaggagaactcggagacccaggtcccagaggtaatgttggtgaacaaggagataag
ggatccattggcaaagctgttgatgggcccactggagaccaaggataccaaggtctaccg
ggagtacctggaatagtcaaagacgggcgtgacggatctccgggagacccgggcgagcct
ggagagtcaggcagggtgggtaggacggggcaccagggacctcctggaatctgtgacaca
acagcctgccagggagcgtcgcccgctgggaaatcctccaaccccaaaaaccattaa
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