Cebidichthys violaceus (monkeyface prickleback): 137888033
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Entry
137888033 CDS
T10484
Name
(RefSeq) collagen alpha-1(IX) chain
KO
K08131
collagen type IX alpha
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve04510
Focal adhesion
cve04512
ECM-receptor interaction
cve04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137888033
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137888033
09142 Cell motility
04820 Cytoskeleton in muscle cells
137888033
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cve00535
]
137888033
Proteoglycans [BR:
cve00535
]
Extracellular matrix (ECM) proteoglycans
Others
137888033
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
137888033
NCBI-ProteinID:
XP_068587404
LinkDB
All DBs
Position
Unknown
AA seq
932 aa
AA seq
DB search
MAACCSPVCVALLSLLLAPAFGQLDLNRLDGDTVCPPMRSGQDDLPGFDLITQFQLDVIP
LKGVRKVDGSTTLQVAYRLDKEANFQIPTMLNFPRGFPDEYSVMVTFRMIKNTVNKVWNV
WQIVDEDGYKQAGLRLNGDQQALEYFLMGADGNLQTVTFPGLSVLFNTKWHKVMIGVERD
QVTLYVDCQPVDQRPIKGKGPINTEGDTLIGRLDADPDASVVFELQWMLIHCDPKRAQRE
SCNELPATEMYANAEPDKSVQGPPGVPGPEGPRGPPGENGRDGRDGLPGSTGSPGGPGTK
GEKGEIGLPGQRGLPGLQGSGGSSGPMGPRGPVGERGLPGFPGPPGPAGPESEGPAGPPG
KPGIPGDEGNIGPEGQPGPRGVAGTSGLPGPPGPPGPAGPPGASNEESGEPCPAACPAGR
QGMPGLPGMKGHAGLAGEPGKDGVAGDKGDDGEQGPQGPPGRMGDDGQRGPIGFPGTLGE
KGDRGPPGFNGVPGPTGPPGAPGVEGIRGRQGLEGPKGDEGAMGPQGEQGPVGGKGDTGE
PGKDGLDGLPGSDGAKGESGTAGAAGLRGIVGIPGLPGKQGLVGPTGPKGDTGGEGPIGP
VGLTGKTGEPGKDGEDGEQGDKGTTGEAGKQGPVGATGPPGIQGDKGDKGYTGDKGLKGH
PGYKGDQGPMGPMGPKGSLGDTGIAGDSGVKGDQGPPGVTGIKGERGEKGIRGATGDEGR
PGQTGHGGLAGPMGARGLDGEPGLPGATGPRGLPGPKVNDENLREMCSAVVEEQLAEFMK
EFLKKPAAIGSPGIPGPAGLPGPAGPAGVAGAAGAPGLNGVKGHPGFYGLPGAPGKKGDA
GDKGEKGDKGEDGLGIKGSPGAPGAPGAPGAAGIGKDGKNGQRGEAGSPGVPGAAGPRGP
LGQPGLCDPSTCIGRLPPLYMVSGKKSASYKN
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttgctgctcacctgtctgcgtggctctgctgtccctcctcctcgctccagca
tttggacaactggacctcaaccgattggatggcgacaccgtctgcccaccaatgagaagt
ggacaagacgacctcccaggttttgatctgatcacacagttccagctggatgtgatccca
ctgaaaggtgtgaggaaggtggacggctccactacccttcaggtggcctaccgccttgac
aaggaggccaacttccaaattccaaccatgctgaactttcctcgcggcttccccgacgag
tactccgtcatggtgaccttccgcatgatcaagaacacggtgaacaaggtgtggaacgtc
tggcaaatagtggacgaggacggctacaaacaagccggactgaggctcaacggggaccag
caggctctggagtacttcctgatgggcgctgatggcaacctgcagaccgtcaccttcccc
ggcctctccgtgctcttcaacaccaaatggcacaaagtgatgatcggcgtggagcgcgac
caggtcactctgtacgtggactgccagcccgtggatcagagacccatcaagggcaaaggc
cccatcaacacggagggagacacgcttatcggcaggctggacgctgaccccgacgcctcc
gtagtgttcgaactccagtggatgttgattcactgtgacccaaagagggcccagagagag
agctgcaacgagctgcctgccaccgagatgtatgccaatgctgagcctgacaaatcagtc
caaggccccccaggagtccctggcccagagggccccagagggcccccaggagaaaacggc
agggatggaagagatggtcttccaggttctactggcagtccaggcggtcctggcaccaaa
ggagagaagggtgagatcggtcttcctggacagagaggcctgcctggccttcaaggatct
ggtggttcttctggtccaatgggtcccagagggcctgtaggggagagaggacttcctggc
tttcctggacccccaggtcctgctggcccagaaagtgaaggacccgctggaccgccgggg
aaaccaggaatcccaggagacgaaggaaacatcggacctgagggtcaacctggacccaga
ggggtagccggcacctcaggacttcccggtcctcctggtccaccagggcctgcgggaccg
cctggtgccagcaatgaggaaagtggggaaccttgtcctgctgcctgccctgctggccga
cagggaatgcctgggctcccagggatgaagggacatgctggtttggctggtgaacctgga
aaagatggagtggcaggagataagggagacgatggagagcaaggtcctcaggggccacca
ggacgcatgggagatgatgggcaaagagggcccattggattccctggaaccctgggagaa
aagggagaccgaggtcctcctggtttcaacggtgtccccggaccgaccggcccacctgga
gctcctggtgtggagggaattcgtggacgtcaaggtttggaggggcccaagggtgacgag
ggagctatgggacctcaaggagagcaaggtcctgtaggaggaaaaggagacactggagaa
cctggtaaagatggcttagatggactccctggttctgatggagctaagggagagtctggt
actgctggagctgctggtctcagggggattgtgggtattccagggctgccaggaaagcag
ggactagttggacccactggtccaaagggcgataccggtggtgagggacccatcgggcct
gttggacttaccggaaagactggtgagcctggaaaagatggagaagatggggaacaagga
gataaaggaacaactggggaagcgggaaaacaggggccagtgggggctactggtcctcca
ggcatccagggtgacaaaggagataaaggttacactggtgacaaaggactgaagggtcat
cctgggtacaaaggggatcaggggcctatgggaccaatgggaccaaaaggaagtctgggg
gacacgggtatagcaggagattcgggggtcaagggagaccagggcccgcctggtgttact
ggaatcaaaggagagcgtggtgagaagggcatacgaggagctacaggagatgagggcaga
ccaggccaaacaggccacgggggtttggctggtccaatgggagctcgaggactggacggt
gaaccaggtcttcctggagcaacaggccccagaggtctacctggcccaaaagtgaatgat
gagaatcttcgggaaatgtgctcagctgttgttgaagaacaattagcagagtttatgaaa
gagtttctgaagaagccggcagccattggttcccccggtattcctggaccggcaggactt
cctggtcccgctggaccagcaggagttgcaggagcagcaggggctccagggctgaacggc
gtcaaaggccatccagggttttatggacttccaggcgcaccgggcaaaaaaggtgatgct
ggggacaagggagaaaagggagacaagggagaggacggtttaggaatcaaaggaagccca
ggcgcaccaggtgcaccaggtgcaccaggtgctgctggcattggcaaggatggcaaaaat
ggacaacgtggtgaggcaggaagccctggtgtccctggagcagctggtccacggggacct
ttagggcagcccggcctttgtgatccatcgacctgtataggcagacttccgcctctctat
atggtcagtggaaagaagtctgccagctacaaaaactaa
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