Cebidichthys violaceus (monkeyface prickleback): 137890116
Help
Entry
137890116 CDS
T10484
Symbol
sf3b1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137890116 (sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cve03041
]
137890116 (sf3b1)
03036 Chromosome and associated proteins [BR:
cve03036
]
137890116 (sf3b1)
Spliceosome [BR:
cve03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
137890116 (sf3b1)
Complex B
137890116 (sf3b1)
Complex C
U2 SnRNP specific factors
137890116 (sf3b1)
Chromosome and associated proteins [BR:
cve03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
137890116 (sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
TPR_DNAAF5
HEAT_EF3_N
HEAT_MROH2B_C
HEAT_ECM29
TPR_IPO5
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
TPR_IMB1
VPS15-like_hel
Adaptin_N
Phage_T7_Gp15
UNC45-central
GST_N_4
Motif
Other DBs
NCBI-GeneID:
137890116
NCBI-ProteinID:
XP_068590320
LinkDB
All DBs
Position
Unknown
AA seq
1318 aa
AA seq
DB search
MAKIAKTHEDIEAQILEIQGMKATLLEEGDQGVGLDSTGFFDQEIYGGSDSRFAGYVTSI
AANEQEDDDEEDSSTSLLGQKKPGYHAPVAILNAIPQSDEQYDPFAEHRPQKIAEREDEY
KARRRQMIISPERLDPFADGGKTPDPKLQVRSYVDVMLEQNLSKEEREIRLQLVEKAKSG
DLKVVNGSAASQAAAKRKRRWDQTADQTPTNTTPKKMSSWDQADSSAETPGHTPGHTPAH
TPSSTRWDETPGRAKGSETPGATPSTRMWDPTPSHTPAGAATPGRDTPGHATPGHGGATG
SVRKNRWDETPKTERETPGHGSGWAETPRTDRGDESVGETPTPGASKRKSRWDETPASQM
GSSTPLLTPGKTPIGTPAMNMATPTPGHLMSMTPEQLQAWRWEREIDERNRPLTDDELDA
MFPEGYKVLPPPAGYVPIRTPARKLSATPTPIGGMTGFHMQVEDRTTKQMNDQPSGNLPF
LKPDDIQYFDKLLVEVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREF
GAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDED
YYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLP
FLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISA
LAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYT
REVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALD
RRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDH
KLEEQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAK
VRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGM
HKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELL
KAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPF
TVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQ
TASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRM
LQYCLQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPQVYNDDKNMYVRYELDYAL
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaaaacgcacgaagatatcgaggcccagatcctggagatccagggg
atgaaggccaccctgctggaggaaggagatcagggagtgggcctcgattccaccggcttt
tttgaccaggagatctatggaggcagcgacagccgctttgctggatacgtcacgtccatc
gccgccaatgaacaggaagatgatgatgaagaggattcatcaacgagcttgttgggacaa
aagaagccagggtaccacgcaccagtggcaatactcaacgccattcctcagtcagacgag
caatacgacccatttgcagagcatcgtccgcagaagatcgcagagcgggaagatgaatac
aaagcccggcgcagacagatgatcatctcacccgagcgtctcgacccttttgcagacggg
ggcaaaacgccggaccccaagctgcaggtcaggtcgtacgtggacgtcatgttggagcaa
aacctgtccaaagaggagagggagatccgtctgcagctggtagagaaggccaaatcgggg
gacctgaaagtcgtcaacgggtccgctgcctcccaggctgccgcgaaacgaaagcgtcgc
tgggaccagaccgctgaccagacccccactaatactacacccaaaaagatgtccagctgg
gaccaggctgactcctctgctgagactccaggacacaccccaggacacacccccgcgcac
acaccctcaagcacccgatgggatgaaacccctgggcgcgctaagggcagcgagacccca
ggggccactcccagcacccgcatgtgggaccccactcccagtcacacgcctgctggcgcc
gccacccctggcagggacacgccgggccacgccacgcccggccacgggggcgccacgggg
agcgtgcgcaagaaccgctgggacgaaaccccgaagacggagcgggagaccccgggacac
gggagcggctgggctgaaacgccgcgcacagacagaggggacgagtcggtgggcgagact
ccgaccccaggggccagcaagaggaagtctcggtgggatgaaacccctgccagtcagatg
ggatcctctacaccgctgctgaccccggggaaaactcccataggaacgccagccatgaac
atggccaccccaacaccaggtcacctgatgagcatgactccagagcagctgcaggcgtgg
aggtgggagcgggagatcgacgagaggaaccggcctctcacagacgacgagcttgacgcc
atgttcccagagggatacaaggttttgcctccaccggccggctacgtgccgatccgcact
ccggcccgcaagttgtcggccacaccgacccccatcggaggcatgacgggcttccacatg
caggtcgaggaccgcaccaccaaacagatgaatgaccagccctcaggaaacctgcccttc
ctcaaacccgacgacatccagtactttgacaaactcctggtggaggtggacgagtccacg
ctgagccctgaggagcagaaggagaggaagatcatgaagctgctgcttaagattaaaaat
ggaacaccgcccatgaggaaggccgctctgcgtcagatcaccgataaagctcgtgaattc
ggagcgggtccgctgttcaaccagatcctgccgttgctcatgtcgcccaccctggaggac
caggagcgccacctgctggtgaaagtcatcgaccgcatcctctacaaactggacgacctg
gttcgaccatacgtacacaagatcctggtggtgattgagccgctgctgattgatgaggac
tactatgccagagtagaaggccgagagatcatctccaacttggcaaaggctgccggtttg
gcgaccatgatctccacaatgcgacccgatatcgacaacatggacgagtacgtcagaaac
accacggcccgagccttcgccgtggtggcctccgctctgggcattccctctctcctgccg
ttcctcaaagctgtgtgtaaaagcaagaagtcctggcaggcccggcacacgggcatcaag
atcgtgcagcagatcgccatcctcatgggctgcgccattctgccccacctccgcagcctg
gtggagatcatcgaacacggtctggtagacgagcagcagaaggtgaggaccatcagcgct
ctggctatcgccgccctcgccgaagccgctactccctacggtatcgaatccttcgactcg
gtcctcaagccgctctggaagggtatcagacagcacagaggaaagggtctggccgctttc
ctcaaagccatcggttacctgatcccgctgatggacgccgagtacgccaactactacacc
agagaggtgatgctgatcctcatcagagagttccagtcccccgatgaggagatgaagaag
attgtcctcaaggtggtgaagcagtgctgtggcactgatggtgtggaagccaactacatc
aagactgagatcctgcctcccttcttcaagcacttctggcagcacaggatggctctggac
agacgtaactacagacagttggtggacaccacagtggagctggccaacaaagtgggagcg
gcagagatcatttctcgcatcgtcgacgacctgaaagacgaggcggagcagtacaggaag
atggtgatggagaccatcgagaaaatcatgggcaacctgggcgccgccgacatcgaccac
aagctggaggagcagctgatcgacggcatcctgtacgccttccaggagcagacgaccgag
gactccgtcatgctgaacggtttcggcaccgtggtgaacgccctcgggaagcgcgtgaag
ccctacctgccccagatctgtggtacggtgctctggcgtctcaacaacaagtccgccaaa
gtccgtcagcaggccgccgacctgatctcccgtaccgccgtggtgatgaagacgtgccag
gaggagaagctgatgggtcacttgggtgtggtgctgtacgagtacctgggagaggagtac
ccggaggttctgggtagcatcctgggagcactgaaggccatcgtcaacgttatcggtatg
cacaagatgactccgcccatcaaagacctgcttcctcgtttgactcccatcctgaagaac
agacacgagaaagtgcaggagaactgcatcgacctggtgggccggatcgccgacaggggg
gctgaatatgtgtcggccagggagtggatgaggatttgttttgagctgctggagctgctg
aaggctcacaaaaaagccatccgcagagccaccgtcaacacgttcggttacatcgccaaa
gccatcggcccccacgatgtcttggccactctgctcaacaacctgaaggtccaggagcgt
cagaaccgagtctgcaccaccgtggccatcgccatcgtggccgagacctgttccccgttc
acggtgctgccggcgctcatgaacgagtaccgcgtgccggagctcaacgtgcagaacggc
gttctcaagtcgctctccttcctgttcgagtacatcggagagatgggcaaggactacatc
tacgccgtcacgccgctgctggaggacgcgctcatggacagagacctggtccacagacag
acggccagcgcggtagtccagcacatgtctctgggcgtctacggcttcggctgcgaggac
tccctcaaccacttgctgaactacgtgtggcccaacgtgttcgagacgtcgccgcacgtg
atccaggccgtcatgggcgccctggaggggctgcgggtcgccatcgggccctgccgcatg
ctgcagtactgcttacagggtttgttccatccggccaggaaggtgcgagacgtctactgg
aagatctacaactccatctacatcggctcccaggacgccctcatcgctcactacccacaa
gtctacaacgacgacaagaacatgtacgtccgctacgagctggattacgccttgtaa
DBGET
integrated database retrieval system
