Charadrius vociferus (killdeer): 104281874
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Entry
104281874 CDS
T08577
Symbol
TSEN54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvf03016
]
104281874 (TSEN54)
Transfer RNA biogenesis [BR:
cvf03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
104281874 (TSEN54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_end_N2
HOOK
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
104281874
NCBI-ProteinID:
XP_009878235
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MNKSLSFEHKPFDQRPSEVSPYLGGKEFIVGHGSNNKLIFNLLRTSLVKAEWKPGQGIVE
LQSPAGKFWHTMGFTEHGKQCLLPEEALYLLECGSVQLFYRDLPLSIQEAYEILLSQEAM
SLPHYQVFSHLKQLGYIVLRFDPSTVLSPYERQLNLESHCQSSGKHHRKRRRSSSPRLHE
KKYKVSEDLPEAEGTSKKAGDDCGDSSCLPMDEQPLSDQPKESHAGSGEGESNPVPLDTG
QKDSLSPSWSRAGDHKESSTGTRAPRWDFTTIVLPNVAPDQPCTHLPSPDNGLLPENVPG
REVDAACWCTRINQKQEKLSRKEREQRERESRYKSSVNADREVRHCSNWQEYKALLAQRS
RQRVWKRPPHLWDQAVTPLLRPDEATSPAALLQQISVLQPSHILDGASRLQEDPEGMKID
FNVYQADAVAKFKKTNPGKPYVRMCVRSFDEQIPSLRALKQVTYQSGDVPVVFALVDHGE
IAFYSLKEFKLPVDLNH
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaagcctctcctttgaacacaaaccttttgatcaaaggccttcagaggtgtcc
ccctacctaggaggtaaggagttcatagtaggacacggtagtaataacaaactaatcttt
aaccttctcaggacaagtctggtgaaagctgagtggaagccaggacagggcatcgtagag
ctgcagtcccctgcggggaagttctggcacaccatggggttcacagagcatggcaaacag
tgcctgctgcccgaggaagctctatacctgctggagtgtggctctgttcagctgttttac
agagatctgcccttgtcaatccaggaagcctacgagatcctgctgtcccaggaggcaatg
agcctgccccattaccaggtgttcagccacttgaagcaactgggttatattgtactgaga
ttcgaccccagcactgtcctgtctccctacgagaggcaactgaacctggaaagtcactgc
cagagctctgggaaacaccatcgcaaaaggaggaggagttccagcccccggttgcatgag
aagaaatataaggtgtcggaggaccttccagaagctgaagggacctccaaaaaagctgga
gatgactgtggagactccagctgccttcccatggatgaacaacccttgtcagaccagcca
aaggaatcacatgctggcagtggagagggagaatcaaacccagttcctcttgatacagga
caaaaggactccctgagcccctcctggagccgtgctggagaccataaggagagcagcact
ggcacccgtgcaccccgctgggattttaccaccattgtcttgccaaacgtggccccagac
cagccatgtacacatctgccctcacctgacaatggactcttgccggagaacgtgccgggg
agggaggttgatgcagcttgctggtgtacacgcatcaatcagaaacaggagaaactgtca
cggaaagaaagggagcagcgagaaagggagagcaggtacaagagcagtgtcaatgctgac
cgggaggtgaggcactgctccaactggcaggagtacaaagcccttctggcacagaggagc
cggcagagggtttggaaacgaccgccacatctctgggaccaagctgttacaccgcttttg
cggccagatgaagctacctcaccagctgcgctcctccagcagatcagcgtgctgcagccc
tcccacatcctggatggagcctcccggctgcaggaggacccagagggcatgaagatagac
ttcaacgtgtatcaagcagatgctgtggccaagtttaagaagacaaaccctgggaagcca
tatgtcaggatgtgtgttcggagctttgatgagcagattccgtcccttcgggctttgaag
caggttacgtatcagagtggggacgtcccagtggtctttgcgctggtggatcacggagaa
attgccttttattcgctaaaggaattcaaactgccggttgatcttaatcactga
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