Charadrius vociferus (killdeer): 104285832
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Entry
104285832 CDS
T08577
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104285832 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104285832 (TTC37)
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
104285832 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_2
TPR_14
TPR_16
TPR_12
TPR_17
TPR_8
TPR_11
TPR_CcmH_CycH
TPR_9
ANAPC3
TPR_15
ARM_TT21_C
BTAD
Fis1_TPR_C
HAT_PRP39_N
ARM_TT21
TPR_5
HAT_Syf1_M
TPR_20
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
104285832
NCBI-ProteinID:
XP_009882639
LinkDB
All DBs
Position
Unknown
AA seq
1564 aa
AA seq
DB search
MSNKEVKAALKSARDAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPDQAK
GAYKKAIELEPNQLLAWQGLANLYEKSNQTDVRGDLADVYQKLLQLYESGDKQKWCDVCN
KLVDLYHQEKKYVEVAETWQKLIRMKQEEGAEKAELHQLWKKMIQLLKDGTQNQDNKTEQ
SLLTAFEHAVNSADPVPGEDHQNLYKDFIQCLSKFPHETARLEKACHDMMALYPTVSYPL
EVLCLHFVQSGTLSEEALHYFSRLLEMDADSGPGIIGFGIKCLQERKYKEAVKSLTEGLQ
KTSQCPPAWHYLAEAQLKIHKHRDAVLCCNRALEALGTPEGPSLRWKNLILQLKAEALIK
IGDSDAAEEAIKSLEQIVDASSDPVVLAIRGQAYLNKGLMDQASKISQELLLSHPDLAES
HALEGFVHYSQKNYEQAERSFLNAIERKAETAEYHQYLGLTYWFMSDETKKDKGKALTQF
LKAAKLDSYLGSVFCYLGNYYRDIAGDKSRARGCYKKAFELDGTDEESGTAAVDLSVELG
DMDTALSILNEVTEKASTGTAKWAWLHRGLYYLRTGQPSQAVADLQAAVRADPKDSNCWE
SLGEAYLSRGSYSTALKSFRKASELNPGLVYSIYKAAAVEQILGKYENAIATYQQILKKT
EDYVPALKGLGECYLMLARSALDDYLDRKAVGYIEQALDFFTRATKHRPDVSCLWKLLGD
SCTSVHVISPTKVNVQVPGSLLGKNAGKQVLKKSELLRLGGRCYGRALKLMPLPSIWCDL
GINYYRQAEDLTALGTDMNEISELLEKSLQCLKKAVRLDSKNHLYWNALGVVASCSAIGN
YALAQHSFIKSVQAEQINVVAWTNLGVLYLSTGNIEQAHEAFKVAQSLEPSYLLCWIGQA
LIAENIGSYDTMDLFRHTAELSMHTEGAKGYAHWVCSTLQDKSNRNTELYLYNIVQMNAI
PAAQVVLSKYTERNPDDASAFTMLGYLNEYLHLKKQAADAYERAASLLKNSEDTEKYNIA
MQNYGRSLCALGQCDKAIEVYTSTPLTDFDGIVGIALAYFKKGLLQESIKAYEKALSVAE
SEQDKAHILTALAIIEYKQNKVDAAKTLLFKCSLKEPSTESLKALCTLGLVKQDATLATA
ALKELLKHETGDDRIYERCLIASAVYALQGRDVGVQREVSKAIHSHPDNPALWSLLSRLV
PLYASQKAKGGAVAGNIAHVLDVNHGKEALLNIAVNQLAAGCHMLEHEKNNPLRNIQKAI
HLCPDNPAAWAVLMAACHAENTVVCLNNTQPKRTDLEMTLVSTVSAKTGENNLPHNYIRT
LEDWCLCQAISSLEETGKLSEAEALCTKGLKSCPEHPALFLLLRQVQCKQLLQSHKELPD
NILEELRKTVMTSSTSVAAWQWLAKVYQSQRMMVGAEMCYRKSLQLASQQGSWNGKLSSL
LRLAMLALEVCMANVSNEHWPSLVQEATTEALKLSSCPLAALLQALLQYNRKMGARYALS
VNHAFDLDYVLVMLLTIVSVARWYLLRHLYAKDDHELIDVLIENAKANGDVRALELHEKL
SASA
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacaaggaagtgaaggcagcattgaagagtgctagagatgcaatacgaaataaa
gaatataaggaagccttaaaacattgcaaggcagttttgaagcaagaaaaaaataactac
aatgcttgggtatttattggcctggcagctgctgagttggagcagcctgatcaggccaaa
ggagcatataagaaggctattgaacttgaaccaaaccagttactggcatggcagggatta
gcaaatttatatgagaaatccaaccaaacagatgtcagaggagacttagcagatgtttac
caaaagctcttgcaactctatgaaagtggtgacaagcagaaatggtgtgatgtatgtaac
aagcttgtggacctatatcatcaagaaaagaaatatgtagaggtggctgaaacatggcag
aaactaatacgaatgaaacaggaggaaggtgcggaaaaggcagagcttcatcaactttgg
aagaagatgatccagttactgaaagacggtacacagaaccaggataataagactgagcag
tcgcttttgaccgcatttgaacacgcggtgaactctgctgaccctgttcctggtgaagac
caccaaaatctttataaggactttattcagtgcttgtcaaagttccctcatgaaacggct
aggttggaaaaggcctgtcatgatatgatggctttgtatcctactgtgagttatccttta
gaagtactttgcttgcactttgttcagtcaggtactttgtcagaagaggccctgcactat
ttttctaggcttttggagatggatgcagatagtggtccaggcatcattggttttggtata
aaatgcctgcaagaaaggaaatacaaggaggctgttaagagtcttactgaaggtttgcag
aagactagccagtgtccaccagcatggcattatttggcagaggcacagctgaaaattcat
aaacacagggacgctgtcctgtgctgcaatcgagctcttgaggctcttggaactcctgag
ggtcctagccttcggtggaagaaccttatccttcagttgaaagcagaggctttgattaaa
ataggtgattccgacgctgcagaagaagccattaaatcacttgagcagattgtggatgca
agcagtgatccagtggttttagctatcagaggtcaggcttatctaaacaaaggtttaatg
gatcaagcttcaaagatttcacaagaacttctgttgtcccaccctgatctggctgagtcc
catgctctagagggtttcgtccattactcccaaaagaattatgaacaggcagaaagaagt
tttctaaatgctattgaaaggaaggctgaaactgcagagtatcatcagtacctggggctc
acatactggtttatgagcgatgagacaaaaaaagacaaaggaaaagcactcactcagttc
ttgaaggctgcaaaattggacagctacttgggaagtgtcttttgttatttaggtaactac
tacagagacattgctggagacaaaagcagagctcgtggttgctataaaaaggcttttgaa
ctggatggaactgatgaagaatctggaacagcagctgtagacttaagtgtggaacttgga
gacatggacactgctctgtcaatcctgaatgaggtaactgaaaaagcgagtactggtaca
gcaaaatgggcctggcttcatcgtggactttactacctgagaactggtcagccgtcacaa
gcagtggctgatttgcaggcagctgtcagggctgatccaaaggattccaactgctgggag
tctctaggagaggcttacttgagcagaggtagctattcaacagctctaaagtccttcagg
aaagccagtgagctgaacccagggcttgtgtacagcatttacaaagctgcagcagtcgag
cagattctaggcaaatatgaaaatgctatagctacctatcaacaaatcttaaagaagaca
gaagattatgtgcctgcactgaaaggacttggtgagtgctatctcatgctggcaagatca
gcccttgatgactatcttgacaggaaggctgtgggttacatagagcaggctctcgatttt
tttacaagggccacaaagcaccgtcctgatgtctcttgcctctggaaactgctcggagat
agctgtactagcgtgcacgttatttcaccaaccaaagtgaatgttcaagttccaggatcc
cttctgggtaaaaatgcaggaaaacaggtgctgaagaaaagcgagctgctcagactggga
ggaaggtgttacggcagagctttaaaactgatgcctttgcctagcatatggtgtgatctt
ggaataaattattatcgacaagcagaggacctcacagcattgggcactgacatgaatgag
atcagtgaactcctagagaagtctttacagtgtctcaaaaaagctgtgaggcttgacagc
aaaaatcatctttattggaatgcacttggtgtagttgcttcctgtagtgctattggaaat
tatgctcttgctcaacattcgttcatcaaatctgttcaagctgagcaaatcaatgttgtt
gcctggaccaacttgggggttttgtatctgtcaactggaaacattgagcaagctcatgaa
gccttcaaggtagcccagtctctggagccttcttacttactgtgttggattgggcaggct
cttattgcagagaacataggcagctatgacactatggatctcttcaggcacacagctgaa
ctcagtatgcatactgagggagcaaaaggctatgcccactgggtatgttcaacgctgcag
gataaaagcaacagaaacactgaactatatctgtacaacattgttcaaatgaatgctatt
ccagcagcccaggtggtcttgagcaaatatacagaaagaaatccagacgatgcatctgct
ttcacaatgcttggttatttgaatgagtatctgcatctaaaaaagcaggcggcggatgcc
tatgagagggcagcttcattgctgaaaaactccgaggacactgagaaatacaatatagca
atgcaaaactatggcaggtcactgtgtgccctgggtcagtgtgataaggccattgaggtt
tacacatcaacacccctaactgattttgatggcattgtggggatagcattagcctacttc
aagaaaggactcttacaagaaagtatcaaggcctatgaaaaagccttgtctgttgctgag
tctgaacaagataaagcgcatatcctgactgccttggcaataatagagtataaacagaat
aaagtggatgctgcaaagacactgctgtttaaatgctcattaaaggaacctagtacggaa
agtctgaaggctttgtgcacactaggactggtaaagcaggatgctacacttgcaacagca
gccctaaaagaattactgaagcatgaaacaggggacgataggatttatgagaggtgcctt
attgcatctgctgtttatgcattgcaaggtagagatgtgggggtccagagagaagtctcc
aaagcaatacacagtcaccctgataatcctgccctctggtctcttctgtctcgactagtt
ccactgtatgcatcacaaaaggcaaaagggggagctgtggcaggaaacattgcacacgta
cttgatgtaaaccatggaaaggaagccctactcaatattgcagttaatcagttggcagca
ggatgtcacatgttagaacatgagaaaaacaatcccctgagaaatattcagaaggcaatc
cacctctgtccagataatcctgctgcctgggcagtgctaatggcagcctgtcatgctgaa
aacaccgttgtctgtctaaacaacactcagccaaagcgaacagatctagagatgacactt
gtatctacggtttcagccaaaactggagaaaataatcttccacataattatatacggact
cttgaagactggtgtctgtgtcaagctattagcagtctagaggagactggtaaactctca
gaagctgaagcgctttgtaccaagggtttaaaaagctgccctgagcacccagctctgttt
ttgcttttgagacaagttcagtgtaagcagctgttgcagtctcacaaagaacttccagac
aacatcctggaggagcttcgcaagacagtcatgaccagttctacttcagttgcagcctgg
caatggctggcaaaagtatatcagtctcaaaggatgatggttggagcagagatgtgttac
agaaagagtctgcagttggcgtcacagcagggcagctggaatgggaagttgtccagtctg
ctcaggctagctatgctcgcactggaagtctgcatggctaatgtctcaaatgagcactgg
ccatccttggttcaggaggcaacaactgaagctttgaagctttcttcttgccccctggca
gctctcctgcaagcactgctgcagtataatcgcaaaatgggagcaaggtatgcattatct
gttaatcatgcatttgatttggattatgttttggttatgcttttaaccatagtgtccgtg
gcacgctggtacctcctgcgacatctgtatgccaaagatgatcacgagttaatagatgtg
cttatagaaaatgccaaagctaatggagatgttagagctctggaactacatgagaaattg
tcagcaagtgcctag
DBGET
integrated database retrieval system
