Charadrius vociferus (killdeer): 104285900
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Entry
104285900 CDS
T08577
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvf03036
]
104285900 (SMC4)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
104285900 (SMC4)
Condensin II
104285900 (SMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_23
AAA_21
AAA_29
THOC7
ABC_tran
Motif
Other DBs
NCBI-GeneID:
104285900
NCBI-ProteinID:
XP_009882713
LinkDB
All DBs
Position
Unknown
AA seq
1309 aa
AA seq
DB search
MEGEQPREIMPSRSTKTSTAAHRKGREPLEESTSDMEVENEGDKQLGEVPPQAVSNEVLD
NRSLEEILGSISPPPPPAMTNEAGAPRLMITHIVNQNFKSYAGEQTLGPFHKRFSCIIGP
NGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHRDIQSCSVEIHFQKIIDKEEDD
YEVVPNSNFCVSRTAYRDNSSVYHINGKKKTFKDVGILLRSHGIDLDHNRFLILQGEVEQ
IAMMKPKGQTEHDEGMLEYLEDLIGSARLKEPIQTLCRRVEILNEQRGEKLNRVKMVEKE
KDALEADKNKAIEFLCLENKMIKEKNHICQYYIYDLKKRINDTEMQKEKINEETKDINEK
SSKLADEMKNKTKALKELEKKLDKITKFVEENKEKFNQLDLQDVKVREKLKHAKSKAKKL
EKQLQKDKEKVEEWKNVPSNSEKVISEATSKRELLEETKEKEEEKLKQVMDSLKKETQGP
QKEKERKEKELMEFSKAVNEARSKMDVAQSELDIYLSRHNNAVSQLNQAKEALMNASETL
KERKAAIKDIGIKLPQAEQELKEKEKELEKLQRQESDAKNLVRNLRQKVEEARSSLAQSR
SRGKVLEALLQQKKSGNIPGLYGRLGDLGTIDEKFDVAISSCCGSLDHIVVDTIDTAQQC
VNFLKAGRIGVATFIALDKMTVWEKRMEKIPTPENTPRLFDLVKVEEEKVLPAFYFALRD
TLVANNLEEGTRVAFQSNKRWRVVTLKGHIIEQSGTMIGGGSKIMKGRMRSSFLMDVSEE
EVSKMESQLQKDSKRAVQYEEEKLQLEEAIRKLHQEVQEMRNTLEKYTASIQNLSDQEIH
LKAQVKELEANVIATAPDKNKQKELEKVLNSYKKDYECVAEKAGKMENEVKRLHNLIIEI
NNHKLKTQQDKLDKINKEIDECTSTITKAQVAVKTADRSLKKSEESVLRTEKEIESNDKE
IKDLTEELAVLEDKATEVMNDCKQAEVSXXXXXXXQQERRSLLQDIKTIQDNEHVLQKEA
LNIKLKIEQVDNHISAHQSKIKYWQKEISKLALHRIEDKPPEELPVLSEEELEAIKDPNV
ITNQIALLETQCHEMKPNLGAIAEYKKKEEQYLKRVAELDHITNERDKFRQAYEDLRKQR
LNEFMAGFNVITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNL
SGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISL
RNNMFEIADRLIGIYKTHNTTKSVATNPKVIASKGLAELGTPACAVAQK
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggaacagccaagggagatcatgccaagtaggagcaccaaaacctctacagca
gcccatcggaaaggcagagagcccttagaggagtccaccagtgacatggaagtggaaaat
gaaggtgacaaacagcttggtgaagtacctccacaagcagtctcaaatgaggtgcttgat
aatcgaagtttagaagagattttgggtagcatctctcctcccccacctccagcaatgacc
aatgaagccggtgctcctcgtctcatgataactcatattgtaaaccagaacttcaaatcc
tatgcaggggagcaaactttgggaccttttcataagcgtttttcatgtattattgggcca
aatggcagtggaaaatccaatgtcattgattcaatgctttttgtgtttgggtatcgagca
caaaaaatcagatccaaaaaactctctgtgctgatccataattctgatgaacatagggac
atccagagttgttctgtggaaatccacttccaaaagatcattgacaaggaagaagatgat
tatgaagtcgttcctaacagcaatttttgtgtatctagaactgcctatagagataattct
tctgtctaccacatcaatggaaagaaaaagacattcaaagatgtcggtattcttcttcga
agccatggaattgatctggaccataacaggttcttaattttacagggggaagttgaacaa
atcgcaatgatgaaaccgaaaggccagactgaacatgatgaaggcatgcttgaatacttg
gaagacctgataggatctgctcgactaaaagagcctatccaaactctgtgtcgcagagta
gagattctaaatgaacagagaggagaaaagttaaatagagttaaaatggtggaaaaagaa
aaggatgccttggaagccgacaaaaataaagctattgaatttctttgtttggaaaacaaa
atgattaaagaaaagaatcatatctgtcaatactatatctatgacctaaagaaacggata
aatgatacggaaatgcagaaagaaaaaattaatgaagaaacaaaagatattaatgagaag
agtagtaaacttgcagatgaaatgaaaaacaagactaaagctttgaaagaacttgaaaaa
aaacttgataaaattacaaagtttgtagaggaaaacaaagaaaaatttaatcagttggat
ctgcaggatgttaaagtaagggaaaaactaaaacatgccaaaagcaaggctaaaaaactg
gagaagcaacttcaaaaggacaaagaaaaggtagaagaatggaaaaatgtgccttccaat
agtgaaaaagttatcagcgaagcaacatctaagagagagcttctggaagagacaaaagag
aaagaagaagaaaaactcaaacaagtcatggatagccttaagaaagaaacacaaggacct
cagaaagaaaaagagcgcaaagagaaagagcttatggagttcagtaaagcagtgaatgaa
gcacgttcgaagatggatgtagcccagtcagagctcgatatctatctcagtcgtcacaat
aatgctgtgtctcagctaaatcaggcaaaggaagctctgatgaatgcttcagaaaccctt
aaggaaaggaaagctgctatcaaagatatagggataaaattacctcaagctgaacaggaa
ttaaaggagaaagagaaggagcttgagaagctgcaaagacaagaatcggatgctaagaat
cttgttcgaaacctgcgtcaaaaagtagaagaagcccgaagttctttagcacagagtcgc
agtcgaggaaaagtgcttgaggctctgcttcagcagaagaaatctggaaatattcctggg
ttatacggaagactgggagacttgggaactattgatgaaaagttcgatgtcgctatttca
tcgtgttgtggttccttagaccacattgttgttgatacgattgatactgcacagcaatgt
gtgaatttcttaaaggcaggaagaattggggttgccacatttatagccctggacaaaatg
actgtttgggaaaaaagaatggaaaaaattccaactcctgaaaatactcctcggttgttt
gacctggtgaaagtagaagaggagaaggttctcccggctttttactttgcgttacgtgat
accctagtagctaataacttggaagaaggtaccagagtagcattccaaagcaataaaaga
tggagggtggtaaccctaaaaggacacatcattgaacagtcaggaacaatgattggcggc
gggagtaaaataatgaagggcagaatgcgttcctcgtttctaatggatgtttcagaggaa
gaggtcagtaaaatggaatctcaactgcagaaggattctaaaagagcagtacagtacgaa
gaagagaaattacaacttgaagaagccataagaaaactgcaccaagaagttcaggaaatg
agaaatactttagaaaagtatacagcaagtatccagaatttatctgaccaagaaattcat
ctaaaagcccaagttaaggaacttgaagcaaacgtaattgctactgctccggacaaaaac
aaacaaaaggaattggaaaaagtccttaacagttataaaaaagattatgagtgcgttgct
gagaaagctggcaaaatggaaaatgaagttaaacgattacataacctcataattgagatc
aataatcataaactaaaaacacaacaagacaaacttgataagatcaacaaagaaatagat
gaatgtacttcaactattactaaagcccaagtggcagtcaagactgcggacagaagcctg
aaaaaatcagaagagtctgttcttcgcacggagaaggaaattgaaagtaacgacaaagaa
attaaagacttaacagaagagctggctgtgctagaagacaaagctactgaggttatgaat
gactgcaagcaagctgaagtaagcnnnnnnnnnnnnnnnnnnnntcagcaggagcgtcgc
agtctgctccaggatattaaaactattcaagataatgaacatgtacttcaaaaggaagct
cttaatattaagctaaaaattgaacaagttgataatcatatttctgcacaccagtcaaag
attaaatattggcaaaaagagatatcaaaattagcactgcaccgcatcgaagataaacca
cctgaagaacttccagtactaagtgaagaagagcttgaggcgatcaaggatccaaatgtt
atcactaatcagatagctctcctggaaacccagtgccatgaaatgaaacccaaccttggt
gcaattgcagaatataagaagaaggaagagcagtacttgaaacgtgtggctgaactggat
cacattaccaatgagagagacaagttcagacaagcttatgaagaccttaggaaacagagg
ctaaatgaatttatggcaggatttaatgtaataacaaataaactgaaggaaaactaccag
atgcttactttgggaggggatgctgaactggaacttgtggacagtctggatcccttctct
gagggaatcatgtttagtgttcggcctccgaagaaaagctggaagaagatatttaactta
tcaggaggagagaagactcttagttcactggctctggtctttgctcttcatcattacaag
ccaacaccactttattttatggacgagattgatgcagcacttgacttcaaaaatgtatct
attgtagcattttacatatatgagcaaacaaaaaatgcacaatttatcatcatctccctc
cgaaacaacatgtttgagatcgcagacagattaattggaatttataagactcacaatacc
acgaaaagtgtggcaacaaaccccaaagtgattgcatcgaaaggactggctgaactcggc
actcctgcgtgtgctgtagctcaaaaatag
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