Charadrius vociferus (killdeer): 104292071 Help Entry 104292071         CDS       T08577                                  Symbol COL6A1 Name (RefSeq) collagen alpha-1(VI) chain   KO K06238   collagen type VI alpha Organism cvf  Charadrius vociferus (killdeer) Pathway cvf04510   Focal adhesion cvf04512   ECM-receptor interaction cvf04518   Integrin signaling cvf04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cvf00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     104292071 (COL6A1)    04518 Integrin signaling     104292071 (COL6A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     104292071 (COL6A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     104292071 (COL6A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cvf04147]     104292071 (COL6A1)    00536 Glycosaminoglycan binding proteins [BR:cvf00536]     104292071 (COL6A1) Exosome [BR:cvf04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    104292071 (COL6A1) Glycosaminoglycan binding proteins [BR:cvf00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104292071 (COL6A1)  Hyaluronan   Extracellular matrix or blood plasma proteins    104292071 (COL6A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  VWA Collagen VWA_2 DUF1194 VWA_3 vWA-TerF-like DUF5507 Motif Other DBs NCBI-GeneID:  104292071 NCBI-ProteinID:  XP_009889695 LinkDB All DBs Position Unknown AA seq 1023 aa AA seqDB search MRLRGFLLTLLLPAVFLAGGSWAQRPEITTRVANAEDCPVDLFFVLDTSESVALRVKPFG DLVAQVKDFTNRFIDKLTNRYYRCDRNLVWNAGALHYSDEVVLIKSLTSMPSGRNELKNR VSAVNYIGKGTYTDCAIKRGIEELLISGSHHKENKYLIVVTDGHPLEGYKEPCGGLDDAA NEAKHLGIKVFSVAISPNHLDQRLNIIATDHAYRRNFTATSLKPTRELDVEDTINTIIDM IKVNTEQSCCSFECQPPRGPLGPPGDPGNEGERGKPGLPGQKGEAGDPGRPGDMGPVGYQ GMKGDKGSRGEKGSRGAKGAKGEKGRRGIDGIDGMKGEAGYPGLPGCKGSPGFDGAQGPP GPKGDPGAYGRKGGKGEPGDDGKPGRQGIPGSPGEKGAPGNRGEPGPAGEMGDEGAPGAD GPPGERGNNGERGPPGSPGDRGPRGEPGEPGPPGDQGREGPLGPPGDQGEAGPPGPKGYR GDDGPRGNEGPKGLPGAPGLPGDPGLMGERGEDGPPGNGTIGFTGAPGQPGDRGDPGING TKGYVGPKGDEGEAGDPGNDNSNPGPRGTKGAKGHRGPEGRPGPPGPVGPPGPDECEILD IIMKMCSCCECTCGPVDLLFVLDSSESIGLQNFQIAKDFIIKVIDRLSKDERVKFEAGES RVGVVQYSHDNTQELVAMGDANIDNIGALKQAVKNLKWIAGGTYTGEALQFTKDNLLRRF TSDKRVAIVITDGRSDTLRDPTPLNSLCDVTPVVSLGIGDIFRNPPNPDHLNDIACLSRP TRPGLSIQRDNYAELLDDTFLQNITSYICQEKKCPDYTCPITFAGPADITLLVDSSTSVG SKNFETTKKFVKRLAERFLEAGKPADDSVRVSVVQYSGRNQQKVEAQFQYNYTVIAKAID NMEFINDATDVNAALRYVTGLYQQSSRAGVKKRVLVFSDGNSQGITARAIERAVQEAQQA GIEIYVLAVGSQANEPNIRVLVTGKSADYDVVYGERHLFRVPDYTSLLRGVFYQTVSRKI AVD NT seq 3072 nt NT seq  +upstreamnt  +downstreamnt atgaggttgcgaggctttctactcactttgctgctcccagccgtcttcctggcgggtggc tcgtgggctcagcgcccagaaatcaccacccgggttgcaaacgcagaagactgccccgtg gacctgttctttgtcctggacacctcagagagcgttgccttgagggtgaagccctttggg gacctggttgcccaagtgaaagatttcaccaaccggttcatcgataagctgacaaacagg tactaccgctgtgaccgcaatctggtgtggaatgctggggcactgcactacagtgatgaa gttgtgctcatcaaaagcctcacctcgatgcctagcggccggaacgagctgaagaaccgt gtctcagctgtgaactacattgggaagggcacctacactgactgcgccataaagcggggc attgaggagctgctcatcagtggctcccatcacaaggagaataaataccttatcgtggtg actgatggacaccccttggaagggtacaaggagccctgcggaggcctggatgatgctgcc aatgaagccaaacatttagggatcaaagtgttctccgttgccatctcccccaaccacctg gaccagcggctcaacatcattgccacggaccatgcctaccgccgcaacttcaccgccacc agcctgaagccaacccgggagcttgacgtggaagatacgatcaacaccatcattgacatg attaaagttaacacggaacaatcatgctgctcctttgagtgccagcctccccgagggccc ctcggacctcctggcgacccaggcaatgagggagaaagaggcaaaccaggtcttcctgga cagaaaggagaggctggagacccaggcagaccaggggacatgggacctgttggctaccaa ggaatgaagggtgacaaaggaagtcgaggagaaaagggctcaagaggagccaaaggagcc aagggtgagaagggcaggcgtggaattgatggcatcgacggcatgaagggtgaagctgga taccctggtctacctggatgcaaaggctcacccggatttgatggagctcaaggcccacct ggaccaaagggagaccccggtgcttatggacgcaagggaggaaagggggagcctggggat gacggaaaacctggccgacaggggattcccggcagtcctggagaaaagggtgcgcctgga aaccggggtgagcctggaccggcaggagagatgggtgatgagggtgctccgggtgcagat ggtcctcctggagaacggggcaacaatggagaaagagggcccccaggctcgcccggcgac cgtgggccaagaggagagccgggagagcctggaccacctggtgaccaagggcgggaagga cccctcggaccacctggtgatcagggtgaggctggacctccaggacccaagggttacaga ggagatgacggcccccgtggcaatgagggcccaaagggattgcctggagcacctgggctg cctggagaccccggcctgatgggagaaaggggggaggatggccctcctgggaatggcaca attggattcacaggcgccccagggcaaccaggagacagaggtgaccctggcattaatgga acaaaaggctatgttggtcctaaaggtgatgaaggagaagctggagaccctggaaatgat aactcaaaccctggccccaggggcaccaaaggagcgaaggggcacaggggacctgaaggc cgcccgggaccaccaggacctgtggggcctccaggaccagatgaatgtgaaatcttggac atcatcatgaagatgtgctcttgctgcgagtgcacctgtggtcccgtcgacctcctcttt gtgttggacagctcggagagcatcggcctgcagaacttccagattgccaaggacttcatc atcaaagtcatcgaccgcctgagcaaggatgagcgtgtgaagtttgaagctggggagtcc cgtgtgggcgttgtgcagtacagccatgacaacacacaggagctggtggccatgggggat gccaacatagacaacattggggcgctcaaacaggcagtgaagaacctgaaatggatagct gggggcacctacactggagaagccttgcagttcaccaaagataacctgctgcggagattc acctctgacaagcgcgttgccattgtcatcacagatggacgctctgacacgctgcgggac cctactccactcaactctctgtgtgatgtcaccccagtggtttcacttgggataggcgac attttccggaaccctccaaatccagatcacctgaatgacatcgcttgtttaagtagacca accaggccaggactgtccattcaaagggacaactacgccgagctcctggatgacaccttc ttgcagaacatcacctcgtacatttgccaagagaagaaatgtccggactatacctgccca atcacctttgctgggccggcagatatcacactgttggtggacagctccaccagtgtgggg agcaagaacttcgagaccaccaagaagttcgtgaagcggctggcggagcggttcctggaa gctggcaagcctgctgacgattctgtgcgtgtctcagtggtccagtacagcggcaggaat cagcagaaagtggaagctcagttccagtacaactacacagtcattgccaaagccatcgac aacatggagttcattaatgatgccacagacgtcaacgccgctctgcggtatgtcacaggg ctataccagcagtcctcccgtgctggggtgaagaagagggtgctggtgttttctgatggc aactctcaagggattactgcaagggccattgagagagctgtgcaggaagcccaacaggct ggcatcgagatttatgtgctggcagtgggcagccaagccaacgagcccaacatccgtgtc ctggtcacagggaagagcgcagattacgatgtggtctatggagagcgccacctcttccgt gtgcctgattatacctctctgctgcgtggtgtcttctaccaaaccgtctccaggaagata gctgttgactga

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