Charadrius vociferus (killdeer): 104293047
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Entry
104293047 CDS
T08577
Symbol
SLC8A1
Name
(RefSeq) sodium/calcium exchanger 1 isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04020
Calcium signaling pathway
cvf04260
Cardiac muscle contraction
cvf04261
Adrenergic signaling in cardiomyocytes
cvf04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
104293047 (SLC8A1)
04020 Calcium signaling pathway
104293047 (SLC8A1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
104293047 (SLC8A1)
04261 Adrenergic signaling in cardiomyocytes
104293047 (SLC8A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvf02000
]
104293047 (SLC8A1)
00536 Glycosaminoglycan binding proteins [BR:
cvf00536
]
104293047 (SLC8A1)
Transporters [BR:
cvf02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
104293047 (SLC8A1)
Glycosaminoglycan binding proteins [BR:
cvf00536
]
Heparan sulfate / Heparin
Others
104293047 (SLC8A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
104293047
NCBI-ProteinID:
XP_009890792
LinkDB
All DBs
Position
Unknown
AA seq
971 aa
AA seq
DB search
MSRATHPPTFPVSFQLLGVVLVLLFHVDGIHAESPSELPVNDTEECTGSYICKKGVILPI
WEPQDPSFGDKIARATVYFVAMVYMFLGVSIIADRFMSSIEVITSQEREITIKKPNGETS
KTTVRIWNETVSNLTLMALGSSAPEILLSVIEVCGHGFTAGDLGPSTIVGSAAFNMFVII
AICVYVVPDGEIRKIKHLRVFFVTAAWSIFAYTWLYIILSVSSPGIVEVWEGLLTFFFFP
ICVVFAWIADRRLLFYKYVYKKYRAGKQRGMIIEHEGDRPSSKADIEMDGKVANSHVENF
LDGTLVLEVDEKDQDDEEARREMARILKELKQKHPDKEIEQLIELANYQVLSQQQKSRAF
YRIQATRLMTGAGNILKRHAADQARKAVSMHEVNSEVAENDPISKLYFEQGTYQCLENCG
TVALTIIRRGGDLTNTVYVDFRTEDGTANAGSDYEFTEGTVVFKPGETQKEIRVGIIDDD
IFEEDENFLVHLSNVRVSTDASDEGILEASRVSTLACLGSPSTATVTIFDDDHAGIFTFE
EPVTHVSESVGTMEVKVLRTSGARGNVIVPYKTIEGSAKGGGEDFEDTCGELEFQNDEIV
KTISIKVIDDEEYEKNKTFYLEIGEPQLVEMSEKKALLLNELGNFSVLEGKLWKGKPIFR
KVQARDHPLPCTVVTIQEENEEKQPLTSKEEEERRIAEMGRPVLGEHTKLEIIIEESYEF
KNTVDKLIKKTNLALVVGTNSWREQFIEAITVSAGEDDDDDECGEEKLPSCFDYVMHFLT
VFWKVLFAFVPPTDYWNGWACFVVSILMIGLLTAFIGDLASHFGCTIGLKDSVTAVVFVA
LGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYHAAHGQAFQV
SPGTLAFSVTLFTIFAFISVGVLLYRRRPEIGGELGGPRTSKLLTSSLFILLWLLYIFFS
SLEAYCHIKGF
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgagcaactcacccacccaccttcccagtgagcttccaactcctcggcgttgtg
ctggtgttgctcttccatgtagacggcatacatgcggagagccccagcgagttgcctgtg
aacgacaccgaggagtgcactggctcatacatctgcaaaaagggtgtgattctaccaata
tgggaaccccaagacccctcatttggtgacaaaatcgctcgggcaacagtgtattttgta
gccatggtgtacatgttcctgggagtatctatcatagctgaccgcttcatgtcctccatc
gaagtcattacatcccaagagcgggaaataaccatcaagaagcccaatggcgagaccagc
aaaaccacagtgaggatctggaatgagaccgtttccaacctcacactgatggccttgggc
tcatctgcccctgagatcctcctgtctgttattgaagtgtgtggccatggcttcacagca
ggggacttggggccaagcacaattgtggggagtgctgcgtttaacatgtttgtcatcatt
gcgatctgtgtttacgttgttccagacggagagataaggaagatcaagcacttgcgagtg
ttttttgttacagcggcctggagcatctttgcctacacttggctttacattattttatcc
gtatcttctcctgggattgtggaggtttgggagggcttgctcaccttcttcttcttcccc
atctgtgtggtgtttgcctggatagctgacaggaggcttttattttataagtacgtctac
aagaaataccgagctggcaagcagagaggcatgatcattgagcacgagggtgaccggccc
tcctccaaagctgatatcgagatggatggcaaagttgctaattctcatgtggagaacttt
ttggatgggacgttggtgttggaggtggatgagaaagaccaggatgatgaggaagccagg
agggaaatggctcggatcctgaaggagctgaaacaaaagcaccccgacaaggaaattgaa
cagcttatagagttggccaactaccaggtcctgagccagcagcagaagagcagggccttt
taccgcattcaggccactcggctcatgacgggagcaggcaacatcttgaagagacatgct
gcagaccaggcccgcaaagctgtcagcatgcatgaggtcaacagtgaggtggcagaaaat
gaccccatcagcaagctctactttgagcagggtacctaccagtgtctggagaactgtggc
actgtcgccctgaccatcattcgccggggaggggacttgaccaacacagtgtacgttgac
ttccggacagaggatgggacggctaatgctggctctgactatgagttcactgaagggaca
gtggtcttcaagcctggagagacccagaaggaaatccgtgttggcataatcgacgatgac
atatttgaggaggatgagaacttcctggtccatctcagcaacgtccgcgtgagcactgat
gcctcagatgagggcattcttgaggccagtcgtgtctcaacacttgcttgcctgggatca
ccatctactgccaccgtcaccatctttgacgatgaccatgcaggcatcttcacctttgag
gagccagtaacgcatgtcagtgaaagtgtggggaccatggaagtcaaagtgttgcgaacc
tctggtgcacgaggaaatgttattgtgccctacaaaaccattgaaggctcagccaaaggt
ggaggagaggactttgaagacacctgcggggagctggaattccagaacgatgagatagtc
aaaacgatatcaatcaaggtgatagatgatgaggagtatgagaaaaacaagaccttctac
ctagagatcggggagccccagctggtggagatgagtgagaagaaagccctgttgttgaat
gagcttggtaatttctctgtcctggaagggaaactctggaagggcaaacctatcttcagg
aaggtccaggctagagatcatcctcttccttgcaccgtggtcaccatccaagaggagaac
gaagaaaagcagccactgaccagcaaggaggaggaagagcgccgaatcgcggagatgggg
cgcccagtcctgggggagcacacgaagctcgaaatcatcattgaggagtcctacgagttc
aagaacacggtggacaagctcattaagaagacgaacctggccctggtggttggcacaaac
agctggagggagcagtttattgaggctattactgtcagcgccggggaagacgatgatgac
gatgaatgtggggaggagaagctgccctcctgctttgactacgtgatgcactttctgacc
gtcttttggaaggtcctttttgcctttgtgcccccgacagactactggaatggctgggct
tgcttcgtcgtttccatcctcatgattggcctcctgacagctttcatcggcgacctggca
tcccactttggctgcaccatcggcttgaaggattcggtcactgcggtggtgtttgttgca
ctggggacatcggtgccagacacgtttgccagcaaagtagcagcgacgcaggaccagtac
gcggacgcctccatcgggaacgtcaccgggagcaatgccgtgaacgttttcctgggcatc
ggggtggcctggtccatcgcggccatctaccacgcggcgcacggacaagccttccaagtc
tcccccggcaccttggccttctccgtcaccctcttcaccatttttgcttttatcagtgtg
ggcgtgctgctctaccggcggagacccgagattggaggtgagctgggcgggccgcggact
tccaagctgctcacatcctcactctttatcctcctctggctcttgtacatattcttctca
tctctggaagcctactgccacataaagggcttctaa
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