Charadrius vociferus (killdeer): 104294007
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Entry
104294007 CDS
T08577
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type substrate 1-like
KO
K06551
signal-regulatory protein alpha/beta1/gamma
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104294007
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvf04515
]
104294007
04090 CD molecules [BR:
cvf04090
]
104294007
Cell adhesion molecules [BR:
cvf04515
]
Immunoglobulin superfamily
SIRP family
104294007
CD molecules [BR:
cvf04090
]
Proteins
104294007
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C1-set
Ig_3
C2-set_2
ig
V-set
I-set
Ig_2
SIT
Rep_fac-A_3
DEC-1_N
CcmD_alt
2HCT
Insulin_TMD
AMA-1
MotA_ExbB
OAD_gamma
RE_MamI
Motif
Other DBs
NCBI-GeneID:
104294007
NCBI-ProteinID:
XP_009891864
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MGVCADPHPEEGQKAGAGKWPGDARGLPQHLLRSRLQEVGNGSWKCREPARDGAASPRPR
PGRLAADLPAAALPARLASTKAPRIPLLVHRHVVRVRGSRVLLANTRWEVAPPGSEPHCA
SGGVGASLCVLLLEFEDVSEQAMSQVGPGVGLLGAREHAEGARAPLPDEGVMWAWWYEMR
ADHPQPGCKPGLLERRPRCLQRQIPVTPGKAGTLCRGGGAGAQVGQGFELQQPQDTVSVT
AGETLTLNCTTSSGRPAGPVKWLKGWGSGNQTVYGQTGSFPRVTRASDGSDTDFTIHIRD
VQPVDAGTYYCVKFTKTGYGDEVFRRGKGTQVSVHGDQTHCAGGRTKSSYDMSSTVTLTL
EADDVRSRLICEVRHPTLTGPLRGTYRLSQALRVSPSVRVVADPPSPVEVNKTVNFTCNV
KDFYPGVVAVTWLENGTEMNVENVSRLVETPQGLFKLSSVVEIKAVEEKNESVFTCRVVH
DSQAPIERMATLWITTPVRDGMSDASQTNNGNLLSIYIAVAVVCTVLALLVAAILYLIRV
KQSKGKSSPSARLHEPEKSSEATTQESDPNNLTYADLNFERERKTIRRMVEMSQQSEYAC
IQTNRAPNGDDNLTYADLDMVHLSKAPKRPAPHPEEAGSEYASVQIPRK
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgggggtctgtgcggacccccaccctgaggaggggcagaaagcaggagccgggaaatgg
ccaggggatgctcgggggctgccccagcatctgctccgctcccggctccaggaggtggga
aatggctcctggaagtgccgagaaccagcccgcgatggagccgcctccccgcggccccgg
ccgggccgtctggccgctgacctgcctgctgctgctctccctgcgcggttggccagcacg
aaggcaccccgcatcccgctgctggtgcacaggcacgtcgtgagggtacggggctcgcgt
gtgctgctggcaaatacccgctgggaggtggctccaccgggctccgagccccactgcgct
tcggggggggtgggggcatcgctctgcgtgctgctgctggagtttgaagatgtttctgag
caagcaatgagtcaggttggtcctggtgtagggctgttgggcgcaagggagcacgcagag
ggtgctcgcgcaccgctgcctgacgagggggtgatgtgggcttggtggtacgagatgcgc
gcggaccacccgcagcccggctgcaaacctgggctcttggagaggcgaccccgctgcctg
cagagacaaatccctgtgacccccgggaaggcagggacgttgtgccgaggtggcggtgcg
ggtgcccaggtggggcagggcttcgagctgcagcagccccaggacacggtgtcggtgaca
gcgggggaaacgctcaccctgaactgcaccacgtccagtggcaggcctgctggccccgtg
aagtggctgaagggttggggcagtgggaaccagactgtctatgggcagacgggctccttc
ccccgcgtgacgagggcatcggatgggtccgacacagacttcaccatccacatcagggac
gttcaacccgtggatgccggcacctattactgtgtgaagttcaccaaaacggggtatggt
gatgaggtgtttcggcgtggaaagggcacgcaggtgtctgtacacggtgaccaaacccac
tgtgccggtgggcggacgaaatcctcctacgacatgtccagcaccgtgacgctaacgctg
gaggcggacgatgtccgctcgcggctcatctgcgaggtgcggcaccccacgctgacgggc
ccgctgagggggacgtaccggctcagccaagccctgcgagtttcccccagtgtccgtgtg
gtcgctgacccgccaagccccgttgaggtgaacaagaccgtgaacttcacctgcaacgtg
aaggatttttacccaggagttgtggccgtcacctggctggagaacgggacagagatgaac
gtggagaatgtctcccggctggtggagaccccccagggcttgttcaagctgagtagcgtg
gtggagatcaaagcggtggaggagaagaacgagtcggtgttcacatgccgtgtggtgcat
gattcccaggcccccatcgagaggatggccaccctgtggatcaccaccccagtcagggac
ggaatgagtgacgcatcccagacaaataacggcaatttgctctcaatctatatcgcggtg
gcagtggtctgcactgtgctggccctgctggtggctgcaattctttacctcatccgggtg
aagcagagcaagggtaaaagctcgccatctgctaggttacatgagccagagaagagcagc
gaggccactacccaggaatctgaccccaacaacctgacctacgcagacctgaactttgag
agagagaggaagaccatccggcggatggtggagatgagtcagcagtcggagtacgcctgc
atccagaccaaccgagcacccaatggtgatgacaacctcacctatgccgacctggacatg
gtgcacctcagcaaggcacccaagcgtccagccccgcaccccgaggaggccggctccgag
tatgccagtgtccagatcccgagaaagtga
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integrated database retrieval system
