Charadrius vociferus (killdeer): 104294845
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Entry
104294845 CDS
T08577
Symbol
CNGB1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
104294845 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvf04040
]
104294845 (CNGB1)
Ion channels [BR:
cvf04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
104294845 (CNGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
104294845
NCBI-ProteinID:
XP_009892807
LinkDB
All DBs
Position
Unknown
AA seq
848 aa
AA seq
DB search
MSKRARDVELDQLVHDKPLDGGDAFPPGGGVLEQLPNVPSYRATAASHIPILVASKPKAG
VVNPNFCNEEQSPLGNYPTVDIKDVDSGGDAVENDGTHLPVPTASSPNMLLVPGMASASP
RRKLLAPEDSLDEGLVSQSPTQALLGWEEQQRESLPERIGSATSLSSAIVNTRLQELVKL
FKERTEKVKEKLTDPDITSDDESPATSPAKPPPEPAPVPPPAGEPEGDKPAGDEHYCEML
CCTFKYRPWLDRLKNYRFPSSIDPLTNLMYVLWLFFVVMAWNWNCWLIPVRWAFPYQTPA
NIHCWLFVDYLCDLIYLLDILVFQTRLQFVRGGDIITDKKAMKENYMRSQRFKMDMVCLL
PLDFFYFKVGVNPLLRFPRCLKYMAFFEFNNRLEAILSKAYIYRVIRTTAYLLYSLHVNS
CLYYWASAYEGLGSTTWVYDGEGNSYIRCYYWAVKTLITIGGLPDPKTLFEIVFQLLNYF
TGVFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTIKYMNFYKIPKAVQNRVKTWYEYTWH
SQGMLDESELLVQLPDKMRLDIAIDVNYNIVSKVALFQGCDRQMIFDMLKRLRSVVYLPN
DYVCKKGEIGREMYIIQAGQVQVLGGPDGKTVLVTLKAGSVFGEISLLAAGGGNRRTANV
VAHGFANLFILDKKDLNEILVHYPESQKLLRKKAKKMLQNNNKPKDEKGAPGDPLIIPPK
ADTPKLFQAALAATGRMGGKGPLAQLRWRLKELRAMQATQHHQFLVFLKPSTSQRELLTQ
ALQETAGERQEESRHQAPTPAMEELPVTPCKPAAATLVQAASTMNLEKAGKGEAEMWRQA
LGRRDAMG
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgtgcccgagacgttgagctagatcagctggtgcacgacaagccgctcgac
ggtggggacgccttccctcccggcggcggtgtgctagagcagctccccaatgtccccagc
taccgagccaccgctgcctcccacatccccatccttgtcgccagcaagccaaaggctgga
gttgtcaaccccaatttttgcaatgaggagcaatcccccctaggtaattaccccactgtg
gacatcaaggatgtggacagcggaggcgatgctgtggagaacgacggtactcacttaccg
gtgcccaccgccagctctcccaacatgctgctggtgcccggcatggcgtcggcatcccct
aggaggaagctgctggccccggaggatagtctggacgaggggctggtgagccagtccccc
acccaagcactgctgggctgggaagagcagcagagagaaagcctgcccgagcgcatcggt
tcagccacgagcctgagcagtgccatcgtcaacacccggctgcaggagctggtgaagctc
ttcaaagagaggactgagaaggtgaaggagaagctgaccgaccccgacatcacctcggat
gatgagagccctgcgacatctcctgccaagccgccacctgagccagcaccagtgcccccg
ccagcaggggagccagagggggacaagccagcaggggacgagcactactgcgagatgctg
tgctgcaccttcaagtaccggccctggctggaccgcctgaaaaactaccggttccccagc
agcatcgacccgctcaccaacctgatgtacgtgctgtggctgtttttcgttgtcatggcc
tggaactggaactgctggttgatccccgtccgttgggctttcccctaccagactccggca
aacatccactgctggctgtttgtggactacctctgcgatctcatttatctgctggacatc
ctcgtctttcagacccggctgcagtttgtccgggggggagacataataaccgataaaaag
gccatgaaagagaactacatgcgatcacaacgctttaagatggatatggtgtgcctcctg
cccctggatttcttctacttcaaagtcggtgtcaacccactcctgcgctttcctcgctgt
ctgaagtacatggccttcttcgagttcaacaaccgcctggaggctatcctgagcaaggcg
tacatctacagagtgattcggaccactgcctacttactgtacagcttgcatgtgaactcc
tgcctctactactgggcatcagcctatgaagggctgggctctaccacctgggtctacgat
ggggaaggaaacagctacatccgctgctactactgggcagtcaaaaccctcatcaccatc
gggggcctgccggaccccaagacgctgttcgagatcgtcttccagttgctgaactacttc
acaggcgtctttgctttctccgtcatgatagggcagatgagagatgttgttggtgccgca
actgcagggcaaacttactatcggagctgcatggacagtaccattaaatacatgaacttc
tacaaaatccccaaagctgttcagaaccgggtgaaaacatggtacgagtacacgtggcat
tcgcaaggcatgctagatgagtcagagctgctggtgcagctgccagacaagatgaggctg
gacatcgccatcgatgtgaactacaacatcgtgagcaaagtggccctcttccagggctgt
gacaggcagatgatctttgacatgctgaagcgtctcagatcagtggtctacctgcctaat
gactacgtgtgcaagaagggggaaatcggccgtgagatgtacattatccaggcgggacaa
gtgcaggtgctgggaggacccgacggcaaaaccgtgctggtgactctgaaagctgggtct
gtgtttggagaaataagcttgctggcggcaggagggggaaatcgccgaacagcaaatgtc
gtagctcatggcttcgctaacctcttcattttggataagaaggacttgaacgagattttg
gtgcattatccggagtctcagaagctgctgcgtaagaaggccaagaaaatgctgcaaaac
aacaataaacccaaagatgagaaaggagcccctggagacccgctgatcatccccccgaaa
gctgacaccccgaagctcttccaggctgccctggccgccacggggaggatggggggcaag
ggaccgctggcgcagctccggtggaggctgaaggagctgagggcgatgcaggcaacacag
caccaccagttcctcgtcttcctcaaacccagcaccagccagcgtgagctgctgacgcag
gccctgcaggagacggcaggcgagcggcaggaggagagccggcaccaggccccgacacca
gccatggaggagctgccagtgaccccctgcaagccagcagctgccacactggtgcaggca
gcctccaccatgaacctggagaaagcaggtaagggagaagccgagatgtggcggcaggca
ctggggaggagggatgcgatgggatga
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