Charadrius vociferus (killdeer): 104294913
Help
Entry
104294913 CDS
T08577
Symbol
SCN2A
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvf04040
]
104294913 (SCN2A)
Ion channels [BR:
cvf04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
104294913 (SCN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
ATP-synt_B
IQCJ-SCHIP1
Neur_chan_memb
HB_ELP1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
104294913
NCBI-ProteinID:
XP_009892905
LinkDB
All DBs
Position
Unknown
AA seq
2018 aa
AA seq
DB search
MAQSVLVPPGPDSFRYFTRESLAAIEQRVNEEKAKKSKQERKDDDDEDGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYMLTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFETTVISYFNSSI
GENGTFINTTMTTFNWDEYIEDRSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAAAADSRDYSGVGGI
GGFSESSSEASKLSSKSAKERRNRRKKKKQKEQSEGEEKDGEEFHKSESEDSIKRKGFRF
SIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDIGSENDFADDEHS
TFEDNESRRDSLFVPHRHGERRNSNISQASRSSRTVPPLPANGKMHSTVDCNGVVSLVGG
PPALTSPTGQLLPEVMIDKAATASNGTTTETDLRKRRSSSYHVPMDYLTDPSARQRAMSI
ASMLTNTMEELEESRQKCPPCWYKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITI
CIVLNTLFMAMEHYPMTEQFSGVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFD
GFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLV
LAIIVFIFAVVGMQLFGKSYKECVCKISSDCELPRWHMHDFFHSFLIVFRVLCGEWIETM
WDCMEVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAV
ARIQKGIDYVKRKVREFIQKAFVRKQKVLDEIKPLEDLNNKKDSCISNHTIVEIGKNLAY
LKEGNGTTSGIGSSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESD
LEESKEKLNASSSSEGSTVDIGLPPEGEQPEAEPEESLEPEACFTEGCVRRFKCCQVSVE
DGKGKIWWNLRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADK
VFTYIFILEMLLKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRT
LRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCV
NTTTDERFDISQINNYSQCEELIKNNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDI
MYAAVDSRNVLDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQD
IFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQAFDISIMILICLNMVT
MMVETDDQSEDMENILYWINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIV
GMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLL
FLVMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSG
EPDCDPHKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESA
EPLSEDDFEMFYEVWEKFDPDATQFIEFSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMV
SGDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEV
SAVIIQRAFRRHLLRQKVKKVSCIFNQEKGKDEDDLPMKEDMIMDKLNENSTPEKTDMTP
STTSPPSYDSVTKPDKDKYEKDKSEKEDKGKDSRESKK
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccaccaggacctgacagcttccgctatttcacaagagaa
tcacttgcagctattgagcagcgtgtcaatgaagaaaaagctaaaaaatccaaacaagaa
cgcaaagatgatgatgatgaagatggcccaaagccaaatagtgacttggaggcaggaaag
acactgccatttatttacggcgacatacctccaggaatggtgtctgagcccttggaagac
ctggacccatattatatcaataaaaaaacctttatagtattgaataaagggaaggcaata
ttccgattcagtgccacctctgccctgtacatgttaactcctttcaatcctcttagaaaa
atagctattaagattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgtgtatttatgactatgagtaaccctccagactggacaaagaatgtagaatac
acattcactggaatttatacctttgaatcacttattaaaattcttgcaaggggcttctgt
ttagaagattttacatttcttcgagacccatggaattggctagatttcactgtcattaca
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagctttgaaaacaatatcagtcattccaggcttgaagactatcgtgggagcc
ctaattcaatctgtgaagaaactctcagatgttatgatcctgactgtgttttgtctgagt
gtatttgcactaatagggcttcagctgttcatgggcaacttgaggaataaatgcctgcag
tggcctccagacaattcgacttttgaaacaaccgttatttcctactttaatagctctata
ggtgaaaacggtacatttattaatacaacaatgacaacatttaactgggatgagtacatc
gaagacagaagtcatttctacttcttggaaggacaaaatgatgctctgctgtgtggcaat
agctcagatgcaggtcaatgtccagaaggatatatatgtgtgaaagctggtagaaacccc
aactatggctacacaagttttgatacattcagttgggcattcttgtcactgtttcgattg
atgactcaggacttttgggagaatctttaccagctgacactgcgtgctgctgggaaaaca
tacatgatattttttgttttggtcattttcctgggttctttctacctgattaacttgatc
ctggctgtggttgccatggcctatgaagaacagaatcaggcaaccatggaagaagcagaa
caaaaagaagcagaatttcaacaaatgctggaacaactgaaaaagcaacaggaggaagct
caggcagcagcagcagctgcagcagctgactcaagagattatagcggagtaggtggaata
ggtggattttccgaaagttcttctgaggcatcgaaactcagctcaaagagtgctaaagag
aggcgaaatagaagaaagaaaaaaaagcaaaaagaacaatctgaaggagaggagaaggat
ggggaagaatttcacaaatctgaatcagaggacagcatcaaaaggaaaggtttccgattt
tccattgaagggaacaggctgacatacgaaaagagattctcttcgccacaccagtctttg
ctgagcattcgtggctccctgttttccccaaggcgcaatagcagaacaagtcttttcagc
ttcagaggtagagcaaaggatataggatcagaaaatgactttgctgatgatgagcacagc
acttttgaagacaatgagagcagaagagattctctctttgttcctcatagacatggtgaa
cggcgcaacagtaacattagccaggccagtaggtcatcaaggacagtacctccacttcca
gcaaatgggaagatgcacagcactgtggattgcaatggagtagtttctctagtcggtggg
ccgccagctctgacgtcacctactggacagcttctgccagaggtgatgattgataaagca
gccactgctagcaatggcactactacagaaactgacttaagaaagagacggtctagttct
tatcatgttcctatggactacctaacagatcctagtgcaaggcaaagagcaatgagtata
gccagcatgcttacaaacacaatggaagaactggaagaatccagacagaaatgcccacca
tgctggtataaatttgctaacacttgcttgatttgggactgctgtactccctggctgaaa
gtcaaacatattgtaaatttgattgtgatggatccatttgttgatctggccattactatc
tgcattgtcctaaacaccctgttcatggccatggagcactatccaatgacagaacagttt
agtggtgtgctttcagtaggaaacctcgtgtttactggaattttcacagcagaaatgttt
ctcaagataattgccatggatccttattactatttccaagaaggctggaatatttttgat
ggttttattgtgagtcttagtttaatggagcttggccttgcaaatgtggaaggattatct
gtccttcgatcattccgattgcttcgagttttcaaattggcaaagtcttggccaactcta
aatatgctgattaagattattggcaactcagtgggggctttgggaaatctaaccctggtg
ctggccatcattgtcttcatttttgctgtggttgggatgcagctgtttgggaaaagctac
aaggaatgcgtttgcaagatctccagtgattgtgaacttccacgctggcacatgcatgat
tttttccactcttttttgattgtattccgagtgctgtgtggagaatggatagaaacgatg
tgggactgcatggaggttgcaggccaagccatgtgccttactgtcttcatgatggtcatg
gtgattggaaacctagtggtactgaacctctttttggccttgcttctgagctcatttagt
tcagacaaccttgctgctacagacgatgataatgaaatgaacaacctacagattgctgtg
gcaaggattcagaaaggcatagattacgtgaagagaaaagtgcgtgaattcatccaaaaa
gcctttgttagaaagcagaaagttttagatgaaatcaaacctcttgaagacctaaacaac
aaaaaagacagctgtatttccaaccacacaatagtagaaataggtaaaaaccttgcctat
cttaaagaagggaatggaactaccagtggcataggcagcagcgtggaaaaatatgttgtt
gatgaaagtgattacatgtcattcataaacaacccaagtctcactgtgacggtgccaatt
gctgtcggggaatcagattttgaaaatttaaatacagaggagttcagcagcgagtcagac
ctggaagaaagcaaagagaaattaaatgcatccagttcatcagaaggcagcacagttgat
atcgggttacctccggaaggggaacagcccgaagcagaacccgaagaatctctggagcca
gaggcttgttttacagaaggctgtgtgcggagattcaaatgctgtcaagtcagtgtagaa
gacgggaaagggaaaatctggtggaatcttaggaaaacctgctataagattgttgaacac
aactggtttgagaccttcattgtcttcatgattcttctcagcagcggtgctctggcattt
gaagatatatacatagagcaacgtaaaactatcaagaccatgctggaatatgctgacaaa
gtttttacttatatcttcattctggaaatgcttttaaaatgggtggcttatggctttcaa
acctatttcactaatgcgtggtgctggctggacttcctgattgttgatgtctctttggtt
agcttaacagctaatgccttgggctactcagaacttggtgcgattaaatcccttaggaca
ctaagagctttgagacctctaagagccttgtcgcgatttgaagggatgagggtggttgtg
aatgccctcttaggagcgattccatccattatgaatgtgctgcttgtttgccttatattc
tggctgatcttcagtatcatgggagtaaatctatttgctggaaaattttactactgtgtt
aacactacaactgatgagagatttgatatcagccaaattaacaactacagtcaatgtgag
gagctcataaaaaacaatgaaactgcccgatggaagaatgtgaaggttaactttgataat
gtaggccttggttatctttctctgcttcaagtggctacatttaaaggatggatggatatc
atgtatgcagctgtggattctcgtaatgttttggatcagcctaagtatgaagataacctg
tacatgtatctttactttgtcatctttatcatctttggatcattctttaccttgaacctt
ttcattggtgtcatcatagacaatttcaaccagcagaaaaagaagtttggaggtcaagac
atttttatgacagaagaacaaaagaaatactacaatgcaatgaaaaaattgggttcaaag
aaaccacaaaagcctatacctcgaccagcaaacaaattccaaggcatggtctttgatttt
gtaacaaaacaagcatttgatatcagtatcatgatactcatctgccttaacatggtcaca
atgatggtagaaacagatgatcagagtgaagacatggagaacattttatattggattaac
ctggtgtttattgtacttttcactggagaatgtgtcctgaaattgatttcacttcgccat
tactattttactataggctggaatatttttgattttgtggttgtcattctctccatagta
ggtatgttcttagctgagatgattgagaaatattttgtatcccccacactattcagagtg
atccgacttgccagaattggtcgaatcctgcgtctcattaaaggcgcgaagggaatccgc
actctgctttttgctttgatgatgtctcttcctgctttgttcaacattggtctgcttctg
ttcctggtcatgtttatctatgcgatatttggcatgtccaactttgcctatgttaaaagg
gaagttgggattgatgatatgttcaactttgaaacgtttggcaacagcatgatctgccta
tttcaaatcaccacatctgctggctgggatggtctgctagccccaattcttaacagtggg
gagccagactgtgacccccataaagatcatccggggagctctgtgaaaggcgactgcggc
aacccttctgttgggattttcttctttgtcagctacattatcatatcatttctggtagtg
gtgaacatgtacattgccgtgattttggagaacttcagtgttgctactgaagaaagcgct
gaacccttgagcgaggatgactttgagatgttctacgaagtctgggagaagtttgatcct
gatgcaacacaattcatagagttcagtaagctatcggattttgcagcttcgttagatcct
cctcttcttatagcaaaaccaaacaaagtccagcttattgcaatggatctgcccatggta
agcggcgacagaattcactgccttgacatcttgtttgctttcacaaagcgtgtgttgggg
gaaagtggggagatggacgccctcagaatacagatggaagatcgttttatggcagccaat
ccttcaaaagtttcctatgaaccaattacaaccacattaaaacggaaacaggaggaagta
tctgctgtcattattcagcgtgctttcagacgtcaccttttaaggcaaaaagttaaaaaa
gtttcatgtatatttaatcaggaaaaaggtaaagatgaggatgatctgcccatgaaagaa
gatatgattatggataaactaaatgagaactctactccagaaaaaacagatatgacccca
tccacaacctccccaccatcctatgatagtgtaacaaagccagacaaggataaatatgaa
aaagacaaatcagaaaaagaagataaaggtaaagacagcagggaaagtaaaaagtaa
DBGET
integrated database retrieval system
