Cyprinodon variegatus (sheepshead minnow): 107081622
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Entry
107081622 CDS
T06110
Symbol
pum2
Name
(RefSeq) pumilio homolog 2 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PUF
PUF_NOP9
Rad26-like_N
Motif
Other DBs
NCBI-GeneID:
107081622
NCBI-ProteinID:
XP_015225258
Ensembl:
ENSCVAG00000002426
LinkDB
All DBs
Position
Unknown
AA seq
1212 aa
AA seq
DB search
MSIPCSILGMNDVGWQETRGGMLHANGAPDAGGVRVHGGGPLTAVGGGQAPGGPHLQGMD
RSSTLTPGTPQPPLSGRSQDDATVGYFFQRQPGEQLVGCTPNKHRWPTGDANHVDQVRAV
DEMNYDFQALALESRGMGELLPTKKIWDSDELAKDGRKGMLLGEEWRENAWGSSHHSVSQ
PIMVQRRPGQGFHGNGDTNSVLSPRSEGGGLGVSMVEYVLSSSPGDKMDGRYRNGGYGGG
DTDQDGREKSDVQEKVSPFEEDKSPEMKVGEDSDPAKTNGRGLLNGMDRDCKDFNPTPGS
RQASPTEAVERMGPTQAGLEMMAQHHQHVIQHQNPAQNKVPTEDFQSQEAQNMGGMEQGG
GVESLQFDYAGNQIQVDSSGTPVGLFDYNSQQQLFQRSNPLTVQQLTAAQQQQYALAAAQ
QQHLAGLAPAFMPNPYIINAAPPGADPYTAAGLAAAATLAGPTVVPPQYYGVPWGVYPAN
LFQQQAASTANHSANQQTSNQGPGPGQPQVMRTGSNQRPLTPGQGQQSQQESLAAAAAAN
PALAYAGMPGYQVLAPAAYYDQTGALVMGPGARTGLSGPVRLVQTPLLINPAAAAAQAAA
AVSASGSGNNMSGPPANGLYRSMPQPQPQQQQAPPPSSGMQSSSFYGSGSVPNTSQSSSL
FSHNSAAQPPPSSSLGFSSTGGSLGVGLGSALGGFGSSVSSSTSSSVSRRDSLLASSDLY
KRGGSSLTPIGQPFYNSLGYSSSPSPIGLTPGHSPLTPPPSLPSSHGSSSSLHLGGLTNG
SGRFISAAPGAEAKYRSAGGTSSLFSSSSQLFPPSRPRYSRSDVMPSGRSRLLEDFRNNR
FPNLQLRDLPGHMVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNY
VIQKFFEFGSADQKLALATRIRGHVLPLALQMYGCRVIQKALESISSEQQVISDIVRELD
GHVLKCVKDQNGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCT
QEQTLPILEELHQHSEQLGQKYQGVSLEMTPKTYYTVSRDALFKDQYGNYVIQHVLEHGR
PEDKSKIVAEVRGKVLVLSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHSALYT
MMKDQYANYVVQRMIDMAEPAQRKIIMHKIRPHIATLRKYTYGKHILAKLEKYYMKSGSE
LGPIGGPTNGLM
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgagcattccatgcagcatcctaggcatgaatgacgtgggttggcaggagacaagaggt
gggatgctgcatgcaaatggtgctcctgatgcagggggtgttcgggttcatggtggcgga
cccctgacggcggtcggcggtggacaggctcctggtggaccacatctacagggtatggac
agaagttctaccctcactccaggtacgccgcagcctccattgagcggaagatctcaggac
gatgcaacagttggatacttctttcagaggcaacctggagagcaacttgttggttgcact
cctaacaagcaccgctggccaactggagatgccaatcatgttgatcaggttcgagctgta
gatgaaatgaattatgattttcaagctcttgctctggaatcaagaggaatgggagagctt
ttgccaacaaaaaagatctgggattccgatgaacttgcaaaggatggaaggaaagggatg
cttcttggtgaagagtggagggagaatgcatggggatcgtctcatcattcagtgtcccag
ccaatcatggtacaacggcggcctggtcagggtttccacgggaacggtgatacaaattct
gtactttcgcctcgctcagagggcggaggcctgggtgtgagcatggtggagtacgtcctg
agctcttctcctggtgacaaaatggacggtcgctacagaaacggaggctatggtggagga
gacactgaccaagatggaagagaaaagagtgatgtacaagagaaggtgtcaccctttgag
gaagacaaaagccctgagatgaaggtgggagaggacagtgatccagccaaaaccaatgga
agaggtctgctaaatggcatggatagagactgcaaagacttcaacccaacccctggaagc
cgccaagcatcccccactgaggccgtggagagaatgggtcccacccaggcgggtttggaa
atgatggcacagcaccatcagcatgtcatccaacatcaaaaccctgcccagaacaaggtc
cccactgaggacttccagagccaagaagcccagaacatgggtggcatggaacagggaggt
ggtgtagagtctctgcagttcgattatgctgggaaccagatccaggtggactcttcagga
actcctgtagggttgtttgactacaactctcagcagcagttgttccagagatcgaatcct
ctgacagttcaacagcttacagcagctcagcaacaacaatatgccctggctgcagctcaa
caacagcatcttgctggactcgctcctgcatttatgccaaatccttacatcattaacgct
gccccgcctggagccgacccatacactgccgctggcctggcagcagcagccacactagca
ggccccaccgttgttccgccccagtactacggtgtcccttggggtgtgtatccagccaat
ctctttcagcaacaggctgcatcaactgccaatcactcagctaatcagcaaacatccaac
cagggaccagggcccggccagccacaggtgatgcgcacagggtccaaccagcgacctctg
actccaggacaaggacaacaaagtcagcaggagtctttagctgctgcagctgctgcaaac
cctgctctagcttacgcaggaatgcctggttatcaggtgttggccccggctgcctattat
gaccaaactggagccttggtaatgggccccggtgctcggactggtctgagcggaccagtt
cgtcttgtacaaacccctctactcattaacccagctgcagcagctgcacaagccgcagca
gctgtatctgcatctggctctggtaacaacatgtctggacccccagccaatggtctgtac
cgctccatgcctcaacctcagccacagcagcagcaagcccccccacccagcagcggcatg
cagtccagctctttctatggctctggatcggttcctaacacctcccaaagcagctctctt
ttctctcataactctgctgcgcaaccgccgccaagttcctctttgggcttcagcagcaca
ggcggctcccttggtgtggggttgggctctgctcttggaggcttcggctcatcagtgtcc
agttcaaccagtagcagcgtgtctcgcagggactcgctgttggcaagttcagacttgtac
aagcgtggtggcagcagtttaactcctattggtcaaccgttttacaacagtctgggttat
tcatcttcacccagtcctattggcctaacaccaggtcactccccactcactcctccacct
tctttgccttcttctcatgggtcgtcctccagccttcacctaggtggcctgacaaatggc
agtgggcgtttcatttctgctgctccaggagccgaggccaaatatcgcagtgctggtggc
acttctagtctgttcagttccagcagccagctcttcccgccctcccggccacgctacagc
cgctctgacgtcatgccttctggacgcagccgcctgctcgaagattttaggaacaaccgt
ttccccaacctccagctacgtgacctaccgggccacatggtggagttctctcaggaccag
catggatccagattcatccaacagaagctggagagggctacacctgctgagaggcagatg
gtgtttggagaaattctgcaagcggcgtatcaactgatgactgacgtttttgggaattac
gtcatccaaaagttctttgagtttggaagtgcagaccaaaagctggctttggcaacacgc
attcgcgggcacgtcctccccctggctttgcagatgtacggctgcagggtcattcagaaa
gctttggagtccatttcctcagagcagcaggtaattagtgacattgtacgagagttggat
gggcacgtactgaagtgtgtcaaagaccagaatgggaaccatgtggtgcagaaatgcatc
gaatgtgtccagcctcaggctctgcagttcattattgacgcctttcagggacaggttttt
gtgctttctactcacccctacggctgccgagtaatccaaaggattttggagcactgcact
caggagcaaacgctgcccatcttggaggagctgcatcagcactctgaacagcttggccag
aaatatcaaggcgtttcattggagatgacacccaaaacatattatacagtgtcccgtgat
gcactgttcaaggatcagtatggtaactacgtcattcagcatgtcttggagcatggcaga
ccagaagataagagcaagatagtggcagaagtccgtggaaaggttttggtcctgagccaa
cataagtttgcaagtaatgtcgtggagaagtgtgttatccactcctcgcgtgctgagcgg
gctctactaatagacgaagtgtgctgccagaaggacggaccccacagcgccctatacacg
atgatgaaggaccagtatgccaactatgttgtgcagagaatgatagacatggcagaacct
gctcaacggaaaatcatcatgcacaagatcaggcctcacatcgccactttgcgcaagtac
acgtatgggaagcacatcctggctaaactagaaaagtactacatgaagagtggctctgaa
ctcggccccattggcggccccacgaacggactcatgtaa
DBGET
integrated database retrieval system
