Cyprinodon variegatus (sheepshead minnow): 107082260
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Entry
107082260 CDS
T06110
Symbol
tnfrsf1a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1A
KO
K03158
tumor necrosis factor receptor superfamily member 1A
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04010
MAPK signaling pathway
cvg04060
Cytokine-cytokine receptor interaction
cvg04150
mTOR signaling pathway
cvg04210
Apoptosis
cvg04217
Necroptosis
cvg04920
Adipocytokine signaling pathway
cvg05132
Salmonella infection
cvg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107082260 (tnfrsf1a)
04150 mTOR signaling pathway
107082260 (tnfrsf1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
107082260 (tnfrsf1a)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
107082260 (tnfrsf1a)
04217 Necroptosis
107082260 (tnfrsf1a)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
107082260 (tnfrsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107082260 (tnfrsf1a)
09171 Infectious disease: bacterial
05132 Salmonella infection
107082260 (tnfrsf1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cvg04050
]
107082260 (tnfrsf1a)
04090 CD molecules [BR:
cvg04090
]
107082260 (tnfrsf1a)
Cytokine receptors [BR:
cvg04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
107082260 (tnfrsf1a)
CD molecules [BR:
cvg04090
]
Proteins
107082260 (tnfrsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNFR_c6
Death
EphA2_TM
YxzE
Motif
Other DBs
NCBI-GeneID:
107082260
NCBI-ProteinID:
XP_015226331
Ensembl:
ENSCVAG00000001144
UniProt:
A0A3Q2FC52
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MDGIGNQAGCIVMLLLLLLRSIPVLTMPQEKDECPPGEYKTDKGICCNKCARGFKLADEC
HFIGHKSNCVPCDAGQFLDEMSFSKNCRSCKRCKAKKHEHLVSACKPEADTICQCDEGYF
KYRIDTEAYDCLRCRTCKTDEIQKKPCTHENDTVCECRTNFFRVKNTCKPCSSCTPECTQ
LCSTTGATKAPHPYPDLTGIIIGTVVMVVVLLILGIIITHMATKRFVKKKMRSQSLCLSE
ESKEQSKDFLINAKSHPEEMSVKTVVENSLGEQELCKLPDCVPMIPDLIYTVLDLVPVHQ
VKQLVRSLGVTDMEIEQAEMDHRFCREAHYQMLRVWAQGGSRTIAGVKGETVHQSLLDEL
LDKLRQIHLNRAAEELEAKYTIQ
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggacggaataggaaatcaagcaggatgtattgtcatgttactgctccttttgctaagg
agcatccctgtgttgacgatgccacaggagaaagatgagtgtccgcccggggaatacaaa
acagataaaggaatatgttgcaacaaatgcgctcgtggttttaagctggcagatgaatgt
cattttatagggcacaaaagtaactgtgtaccttgtgatgctggtcaattcttagacgag
atgagcttctccaaaaattgcagaagttgtaaacgctgcaaagcaaaaaaacatgaacat
ctggtatcggcatgtaaaccggaagcagacactatttgtcaatgcgacgaaggctacttt
aaatatagaattgacacagaggcatacgactgtctcagatgtcgtacatgtaaaactgat
gagatacaaaaaaagccctgtacacatgaaaatgacaccgtttgtgaatgtaggacgaac
ttcttcagagtgaagaatacgtgtaaaccctgcagcagttgtaccccggaatgcacacaa
ctctgttcaactactggtgcgacaaaagctcctcatccttatcctgatcttaccggtata
attattggaactgtggtcatggtggtggtcttgctgatattgggaattatcatcacccac
atggctacaaaacggtttgtcaagaaaaagatgcggagtcagtcactgtgtctatctgaa
gaatcaaaggaacaaagcaaggatttcctgatcaatgccaaaagtcatccggaggaaatg
agtgtgaaaactgtcgttgaaaactctttgggtgagcaggagttatgcaagctgcctgac
tgtgtcccgatgatccctgaccttatctacactgtgctggatctggttcctgtgcaccag
gtaaagcagctggttcgctctctcggtgtaaccgatatggaaattgagcaagcagagatg
gatcacaggttctgccgtgaggctcactaccagatgctacgggtgtgggcccaggggggc
tcgcggacaattgccggagtaaagggtgaaactgttcaccaatcgctattagatgagctc
ttagacaaactgagacagattcacctcaaccgggcagccgaggaactggaggcaaagtat
accattcagtga
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