Cyprinodon variegatus (sheepshead minnow): 107082304
Help
Entry
107082304 CDS
T06110
Name
(RefSeq) transcription factor 7-like 1-A isoform X1
KO
K04490
transcription factor 7-like 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04310
Wnt signaling pathway
cvg04520
Adherens junction
cvg04916
Melanogenesis
cvg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
107082304
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
107082304
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
107082304
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107082304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107082304
Transcription factors [BR:
cvg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
107082304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
107082304
NCBI-ProteinID:
XP_015226389
Ensembl:
ENSCVAG00000020814
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MPQLNGGGGDDLGANDEMISFKDEGEQEDKISENVSAERDLDDVKSSLVNESENNSSSSD
SEQAERRPQTRPDSESYEKTRDYFSEALRRQQDGGFFKSPHYPGYPFLMIPDLTNPYLSN
GSLSPSARTYLQMKWPLLDVPGSAGIKDSRSPTPGHLSNKVPVVQHAHHVHPLTPLITYS
NEHFSPGTPPSHLSPEILDPKTGIPRTPHPSELSPYYPLSPGAVGSIAHPLSWFMQQQGQ
PMYSIPPGGFRHPYPTLAMNASMSSLVSSRFSPHMVTPPPHSLHQTGIPHPAIVSPAIKQ
EPNGDNISPSMHARKSPVPSKKEEDKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAI
NQILGRRWHSLSREEQAKYYELARKERQLHSQLYPGWSARDNYGKRKKRKRENKPDSKPE
DFSIRSKKQCVQYLPSEKMCDSPASSHGSMLDSPATPSAALASPAAPAPTHSEQAQPLSL
TTKPEGRMHHHFSVPGKASGSASSSSSSSSSSSSSQPSISIPVGTSGSQSSTPILTRPIP
FTSLHPSMLSPPSPFHQAALHSHHSLFQSQPLSLVTKPTE
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgccacagctgaacggaggcggcggggacgatctgggggccaacgatgaaatgatctcc
ttcaaagacgaaggggagcaggaggacaagatctccgagaacgtctcagcggagagggac
ctggatgacgtcaagtcctccttggtcaacgagtcggaaaacaacagcagctcatcagac
tcggagcaggcagagaggcgcccccaaaccagacccgactcagaaagttatgagaaaaca
agagattacttcagtgaagcactaagaagacagcaagatggaggcttttttaagagccct
cactatccgggctacccgtttcttatgattcctgacctcaccaatccatacctatccaat
ggttcactgtctcccagtgcaagaacatacctgcagatgaaatggcctctcttggacgtc
cccggctccgcaggaataaaagattcccgttctcccacaccaggacatttatccaataaa
gttccggtggtacagcatgcccatcacgtccatccactgacccccctcatcacctacagc
aatgaacacttctctccgggcacgcctccatcacacctctcacctgagatccttgatcca
aagacaggtattcctcgaacacctcatccatcagagctctcgccgtactacccactgtct
cccggtgctgttggctcgattgcacatcctctaagctggtttatgcaacagcagggccag
cccatgtactccatccctccagggggattccgtcacccctatccgacgttggctatgaat
gcgtccatgtccagcttggtgtccagccgtttctcccctcacatggtgacccctcctccg
cacagcctccaccagaccggcatcccccatcccgccatcgtctcaccagccataaagcaa
gaacctaacggcgacaacatcagcccctccatgcatgccaggaagtcccctgttccttcc
aagaaagaggaggacaagaagcctcacatcaagaagcctctcaacgctttcatgctgtac
atgaaggaaatgagggccaaggtagtggcagagtgcaccctgaaggaaagcgctgcgatt
aaccagatccttgggagacggtggcactcgctgtccagagaggagcaagccaaatactac
gagctggccagaaaagaaaggcaactgcactcccagctctatcctggatggtcggcacga
gataactacggaaagcggaaaaagaggaagagagagaacaagccagactcaaaaccagag
gacttctccataaggagtaagaaacagtgcgtgcagtatttgccctcggagaagatgtgc
gacagtccggcgtcatctcacggcagcatgctggactcgccggccactccctctgccgcc
ctggcctcccccgccgccccggccccaactcactctgaacaggctcagccgctgtcgctc
accaccaaaccggagggacgcatgcaccaccacttctctgtacctgggaaggcctctgga
tccgcatcctcctcctcctcttcctcctcttcctcctcctcttcccagccctccatctcc
atccctgtcggtacttcaggcagccagtcgagcacacccatcctcacccggccgatcccc
ttcacctccctgcacccctccatgctctccccgccgtcccccttccatcaggcggctctt
cactcccatcattccctcttccagtcccagcccctctccctggttaccaaaccaactgaa
tga
DBGET
integrated database retrieval system
