Cyprinodon variegatus (sheepshead minnow): 107082737
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Entry
107082737 CDS
T06110
Name
(RefSeq) macrophage mannose receptor 1-like
KO
K06560
mannose receptor, C type
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107082737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107082737
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvg04054
]
107082737
04090 CD molecules [BR:
cvg04090
]
107082737
04091 Lectins [BR:
cvg04091
]
107082737
Membrane trafficking [BR:
cvg04131
]
Endocytosis
Phagocytosis
C-lectin receptors
107082737
Pattern recognition receptors [BR:
cvg04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
107082737
CD molecules [BR:
cvg04090
]
Proteins
107082737
Lectins [BR:
cvg04091
]
C-Type lectins
Others
107082737
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lectin_C
fn2
CysR_MRC2_N
Ricin_B_lectin
Motif
Other DBs
NCBI-GeneID:
107082737
NCBI-ProteinID:
XP_015227054
Ensembl:
ENSCVAG00000004393
UniProt:
A0A3Q2CE06
LinkDB
All DBs
Position
Unknown
AA seq
1435 aa
AA seq
DB search
MMSAALRLRRMSPHRIALVTLVFLMLPSQGSTLTNDSPFLLMNKASGFCLVKRGTRCTEV
RWTTGNRLLVVLTKKCLGAEGESVGSEVSQHDCDEKNTLQMWECRNGTLLALKDKPFYIQ
VKPDESIVLSKTVGPYNHLTITGTSSGACTRTHRELYTIGGNAFGKICMFPFLYKDRWYG
DCTTYDSKVKRSWCATETKFQNEKWGYCPSSSTEHWSKNIVTGAYYQVNQQSALTWAQAD
TSCKQQAASLVSIVDPIEKAFITALTATGRNKVWIGLVLDSEHGWQWTDGKPFRYLKWDS
GHPLPNPGHNCAVLDTAGQFSWQSSSCTKKLGYICYKGGSPPAPPQIEEGFCSNPWIPYN
GHCFHLQRNTMSWPDAQRECRKEGGDLVNIRNVEDQSFVISQLGYASNDELWIGLNDRTT
EGLFDWSDYTTVTFTSWGFGEPTVSIESEDCVLITGENGNWADRSCDEKKGFICMKQSAI
ERTGNEPDLDIGCKAGWRRHGSFCYFVGTETKSFDEANEHCKTSGSYLADVSNGVDNAFL
VSLVGLRPEKHFWLGLSNQNNIEVFTWTNTEFVRFTHWNAGMPGNNQGCVAIATGFSAGL
WDVLPCTNKEKYICKHMAEGVVATVPPPTQTPPQCPEGWNRVGTRNVCAKFFTGPRSEEK
TWFEARDYCKAIGGDLLSIHSASEMVLSSRGGKAWIGLHVEDPNTGFVWTDGSALNFQHW
QEGEPNNFNNDESCTEFVLHNWDENGSWNDLNCESYNDWLCQIRAGVVPKPPPNNTAEEI
NTTVDGWIQWKGKQYFLNRMSKSMEEARAFCRERHGDLVSFTSKEENIFLWKQISRSYGS
WYIGLSVDLDGSFWWMDGTPVSYQRWEEDQPNSNAFDENCVTMGYHMGYWRTTNCGRESQ
FICKRSNSPPVNSTAAPTMPPKGGCQPSWTKFGTKCYKITYERQITWEEARTQCISIGAN
LVSIPTRQVQAFLITRMLTATNTGLWIGLNSLKQEGFFWTDGKTRKYTNWGYGKFQRRPG
SFYQRWDEEECVLMSTNSATGIGKWLIKSCNDTNGFICAKNINPGFPGNTDPIDPLIYQH
LGNDSIKAVTQNLTWYNAKKQCESEKASLASLRNEWTNAYVELLALTLKAPLWIGLNKNE
TQGYFRYIDGWHLSSSNWAENEPSRDKPCVYVDVDGKWRTAFCNQTLNSVCMQSTDVPPT
ESSVFPGSCPEDTNVEYQNSYTWLPYKGNCYLFVTDEIEWADAASSCVRHGGVLTSIEDP
SEQQFLQSNIEVFQDSHNSFWVGLFKTHKGTWAWLDKTVFDYSNWDEDEPDSDFGAIRTT
NGKWNSGRRWHDRSYICKTPKVILNDLPSKSKQEGGDNLRSRVHTSLVVVMLIAIFSTLM
VVAFMVYKRSPRSFPTFDNPLYFNGDKSPPDVVDTNKLIENAELPSEKLEPILTL
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgctgctttgagacttagaagaatgtcacctcacaggattgctcttgtaacc
cttgtgttccttatgctgccatctcagggatctacattaacaaatgactctccatttctt
ctgatgaacaaagcttctgggttttgcttggtaaaaagaggcacccgctgcacggaagtt
cgctggacgactggtaaccgacttttagtggttctgaccaaaaagtgcctcggagctgaa
ggtgaaagtgtggggagcgaggttagccagcatgactgtgatgaaaagaacaccctgcag
atgtgggagtgcaggaatggaacgctgcttgctctcaaagacaagccattctatattcag
gtcaaacctgatgagtcgattgttctgtccaaaactgttgggccatacaaccacctcacc
attacgggaacatctagtggtgcctgcacaagaacacacagagagttgtacaccattgga
gggaatgcttttggaaaaatctgcatgtttcccttcttgtacaaagaccggtggtatgga
gactgcacaacgtatgactccaaagtgaagcgcagttggtgtgcaactgaaaccaaattt
caaaatgaaaagtggggttactgcccatcttcttccacagagcactggagcaagaatatt
gttaccggagcatattaccaggtgaaccagcagtcagctctgacctgggcacaggctgac
accagttgcaaacagcaggctgcatctctggttagtatagttgatcccatcgagaaagcc
tttatcacagcattaacagcaacaggaaggaacaaggtctggatcgggctggttttggac
tcagaacatggctggcagtggactgatggaaagccttttcgctatctaaagtgggatagc
ggacacccacttccaaatccgggacacaactgtgcggttcttgacactgcaggccaattc
tcttggcaaagttcctcttgcacaaagaagcttggctacatctgctacaaaggcggatcg
ccaccagctcctccgcaaattgaggaaggattttgctcaaacccttggatcccctacaat
ggacactgttttcaccttcagcgtaatacaatgtcatggcctgatgctcagagagagtgt
cgcaaagaagggggtgaccttgtgaatattcgcaatgtggaggatcaaagctttgtcatc
tcacagcttggatatgcgtccaatgatgagctttggataggactgaatgacagaaccact
gaagggctgtttgactggagtgattacacaactgtcaccttcaccagctggggatttggg
gaaccaactgtgtccattgaatcagaagattgtgttcttatcacaggagagaatggaaac
tgggcagaccgttcctgcgatgaaaagaaggggtttatttgcatgaagcaaagcgccatt
gaaagaactggaaatgaaccagatttggacattggctgcaaagctggctggagaagacat
ggttcgttttgctactttgttggaactgaaacaaagagctttgatgaagctaatgaacac
tgcaagacttctggctcttacttagctgatgtctctaatggggtggataatgccttcctt
gtgagtctggtgggattgagaccagagaaacacttctggctcggtctctcaaatcagaat
aacattgaagtgttcacctggaccaatacagagtttgtgagattcacacactggaatgct
ggaatgccaggtaacaaccaaggttgtgttgccattgctactgggttttcagctggactc
tgggatgtactgccctgcaccaataaggagaaatacatctgcaaacacatggcagagggg
gtggtggcaacagttccacccccaacccaaactcctccccagtgtccagaaggttggaat
cgagtaggaacaagaaatgtgtgcgcaaagttttttacagggccacgatcagaagagaaa
acttggtttgaagccagagattactgcaaagccataggaggagatctgttgagcatccac
agtgcctctgaaatggtgttatcaagtagagggggtaaagcttggattggactccatgtt
gaagaccccaatactggttttgtatggacggacgggagtgcgttaaacttccagcactgg
caggaaggggaaccgaacaattttaacaatgatgaatcatgtaccgagtttgtgttacac
aactgggacgagaacggctcctggaatgatctgaactgtgaaagttacaatgactggttg
tgtcagattcgagcaggagtagttccaaagccgcctcccaacaatacagcagaagaaatt
aacaccactgtagatggttggattcagtggaaagggaaacaatattttctgaacagaatg
tctaaatctatggaagaggctcgtgctttttgcagggagagacacggtgacttagtatca
tttaccagtaaagaggagaatattttcttatggaaacagatatcaagaagctatggctca
tggtatataggtttatcagtggatcttgatgggtcattttggtggatggatggtacccct
gtgtcatatcaaagatgggaagaggatcagcctaattctaatgcctttgatgagaactgt
gttactatgggttatcatatgggatactggcgcactactaactgtggaagagaatctcaa
tttatctgtaaaagatccaactcgccaccggtaaacagcacagcagccccaactatgcct
cccaagggcggatgccaaccttcatggacaaaatttggcacaaagtgttataagattacg
tacgaacgccagatcacatgggaagaggcaagaactcagtgcatcagtattggagccaat
ttagtgtccattccaacgagacaagtgcaagcatttttgatcactagaatgctcacagca
acaaatacaggtctatggataggtttaaacagcctaaaacaagagggatttttctggact
gatggcaaaacacggaagtacaccaactggggttatggtaaatttcaacgacgtcctgga
tcattttatcaaagatgggatgaggaggagtgcgtgttaatgtccaccaattcagcgacc
gggatcggcaaatggctgataaagtcctgcaatgacacaaatggattcatatgtgccaaa
aatattaacccaggttttccaggtaacacagatccaattgatcctctcatctatcaacac
ctgggaaatgatagcattaaggctgtgactcaaaatctgacctggtacaacgccaagaaa
cagtgcgaaagtgaaaaggccagtttggccagcctacgaaatgagtggacaaatgcctat
gttgaactactggctttgaccctcaaagctcctctgtggattggactaaacaaaaatgag
actcaaggttatttccggtacattgatggctggcacctgagctccagcaactgggccgaa
aatgaaccaagcagggataaaccatgtgtgtatgtagatgttgatggaaaatggcgaaca
gctttctgcaaccagactttgaatagtgtctgcatgcagtctacagatgttccacctaca
gagtcctctgtatttcctggaagctgccctgaagataccaatgtggagtaccagaatagt
tacacttggctgccatataaaggcaattgctatttgtttgtgacagatgaaattgaatgg
gcagatgcagctagcagctgtgtaagacatggtggagttctgacaagtattgaagatcct
tcagagcaacaatttctccaaagcaacatagaagtattccaagacagccacaactcattc
tgggtgggtttgtttaaaacacacaaagggacatgggcatggttagataaaacagtcttt
gactatagtaactgggatgaagatgagcctgattctgattttggagctatcagaactaca
aatgggaaatggaattcaggccgcagatggcatgatagatcatatatttgtaaaacacct
aaagttatactcaatgacttaccatcgaaatcaaaacaagaaggaggtgacaatctacgc
agccgtgttcacacaagtttggtggttgtgatgctcattgccatcttctccacactgatg
gttgttgccttcatggtctacaagagatctcctcgctccttccccacctttgacaatcca
ctgtacttcaatggcgataaatctccgcctgacgtggttgacactaataaactgatcgag
aatgcagaacttccctcagaaaagctggagcccattttaactctgtga
DBGET
integrated database retrieval system
